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Wenming Zhao
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2020 – today
- 2023
- [j25]Lun Li
, Bo Xu, Dongmei Tian, Anke Wang, Junwei Zhu, Cuiping Li, Na Li, Wei Zhao, Leisheng Shi, Yongbiao Xue, Zhang Zhang
, Yiming Bao
, Wenming Zhao, Shuhui Song:
McAN: a novel computational algorithm and platform for constructing and visualizing haplotype networks. Briefings Bioinform. 24(3) (2023) - [j24]Lina Ma
, Dong Zou
, Lin Liu
, Huma Shireen
, Amir Ali Abbasi
, Alex Bateman
, Jing-Fa Xiao
, Wenming Zhao
, Yiming Bao
, Zhang Zhang
:
Database Commons: A Catalog of Worldwide Biological Databases. Genom. Proteom. Bioinform. 21(5): 1054-1058 (2023) - [j23]Enhui Jin
, Dongli Zhao
, Gangao Wu
, Junwei Zhu
, Zhonghuang Wang
, Zhiyao Wei
, Sisi Zhang
, Anke Wang
, Bixia Tang
, Xu Chen
, Yanling Sun
, Zhe Zhang
, Wenming Zhao
, Yuanguang Meng
:
OBIA: An Open Biomedical Imaging Archive. Genom. Proteom. Bioinform. 21(5): 1059-1065 (2023) - [j22]Guangya Duan, Gangao Wu
, Xiaoning Chen, Dongmei Tian, Zhaohua Li, Yanling Sun
, Zhenglin Du
, Lili Hao
, Shuhui Song
, Yuan Gao, Jing-Fa Xiao
, Zhang Zhang
, Yiming Bao
, Bixia Tang
, Wenming Zhao:
HGD: an integrated homologous gene database across multiple species. Nucleic Acids Res. 51(D1): 994-1002 (2023) - 2022
- [j21]Dalang Yu, Xiao Yang, Bixia Tang, Yi-Hsuan Pan
, Jianing Yang
, Guangya Duan, Junwei Zhu, Zi-Qian Hao
, Hailong Mu, Long Dai, Wangjie Hu
, Mochen Zhang
, Ying Cui, Tong Jin, Cui-Ping Li, Lina Ma, Xiao Su
, Guoqing Zhang
, Wenming Zhao, Haipeng Li
:
Coronavirus GenBrowser for monitoring the transmission and evolution of SARS-CoV-2. Briefings Bioinform. 23(2) (2022) - [j20]Yali Hou
, Shilei Zhao
, Qi Liu
, Xiaolong Zhang
, Tong Sha
, Yankai Su
, Wenming Zhao
, Yiming Bao
, Yongbiao Xue
, Hua Chen
:
Ongoing Positive Selection Drives the Evolution of SARS-CoV-2 Genomes. Genom. Proteom. Bioinform. 20(6): 1214-1223 (2022) - [j19]Yongbiao Xue, Yiming Bao, Zhang Zhang, Wenming Zhao, Jing-Fa Xiao, Shunmin He, Guoqing Zhang, Yixue Li, Guoping Zhao, Runsheng Chen, Jingyao Zeng, Yadong Zhang, Yunfei Shang, Jialin Mai, Shuo Shi, Mingming Lu, Congfan Bu, Zhewen Zhang, Zhenglin Du, Yinying Wang, Hongen Kang, Tianyi Xu, Lili Hao, Peilin Jia, Shuai Jiang, Qiheng Qian, Tongtong Zhu, Wenting Zong, Tong Jin, Yuansheng Zhang, Dong Zou, Qiang Du, Changrui Feng, Lina Ma, Sisi Zhang, Anke Wang, Lili Dong, Yanqing Wang, Wan Liu, Xing Yan, Yunchao Ling, Zhihua Zhou, Wang Kang, Tao Zhang, Shuai Ma, Haoteng Yan, Zunpeng Liu, Zejun Ji, Yusheng Cai, Si Wang, Moshi Song, Jie Ren, Qi Zhou, Jing Qu, Weiqi Zhang, Guanghui Liu, Xu Chen, Tingting Chen, Yanling Sun, Caixia Yu, Bixia Tang, Junwei Zhu, Shuang Zhai, Yubin Sun, Qiancheng Chen, Xiaoyu Yang, Xin Zhang, Zhengqi Sang, Yonggang Wang, Yilin Zhao, Huanxin Chen, Li Lan, Yingke Ma, Yaokai Jia, Xinchang Zheng, Meili Chen, Ming Chen, Guangyi Niu, Rong Pan, Wei Jing, Jian Sang, Chang Liu, Yujia Xiong, Mochen Zhang, Guoliang Wang, Lizhi Yi, Wei Zhao, Song Wu, Zhuang Xiong, Rujiao Li, Zheng Gong, Lin Liu, Zhao Li, Qianpeng Li, Sicheng Luo, Jiajia Wang, Yirong Shi, Honghong Zhou, Peng Zhang, Tingrui Song, Yanyan Li, Fei Yang, Mengwei Li, Zhaohua Li, Dongmei Tian, Xiaonan Liu, Cuiping Li, Xufei Teng, Shuhui Song, Yang Zhang, Ruru Chen, Rongqin Zhang, Feng Xu, Yifan Wang, Chenfen Zhou, Haizhou Wang, Andrew E. Teschendorff, Yungang He, Zhen Yang, Lun Li, Na Li, Ying Cui, Guangya Duan, Gangao Wu, Tianhao Huang, Enhui Jin, Hailong Kang, Zhonghuang Wang, Hua Chen, Mingkun Li, Wanshan Ning, Yu Xue, Yanhu Liu, Qijun Zhou, Xingyan Liu, Longlong Zhang, Bingyu Mao, Shihua Zhang, Yaping Zhang, Guodong Wang, Qianghui Zhu, Xin Li, Menghua Li, Yuanming Liu, Hong Luo, Xiaoyuan Wu, Haichun Jing, Yitong Pan, Leisheng Shi, Zhixiang Zuo, Jian Ren, Xinxin Zhang, Yun Xiao, Xia Li, Dan Liu, Chi Zhang, Zheng Zhao, Tao Jiang, Wanying Wu, Fangqing Zhao, Xianwen Meng, Di Peng, Hao Luo, Feng Gao, Shaofeng Lin, Chuijie Liu, Anyuan Guo, Hao Yuan, Tianhan Su, Yong E. Zhang, Yincong Zhou, Guoji Guo, Shanshan Fu, Xiaodan Tan, Weizhi Zhang, Mei Luo, Yubin Xie, Chenwei Wang, Xingyu Liao, Xin Gao, Jianxin Wang, Guiyan Xie, Chunhui Yuan, Feng Tian, Dechang Yang, Ge Gao, Dachao Tang, Wenyi Wu, Yujie Gou, Cheng Han, Qinghua Cui, Xiangshang Li, Chuan-Yun Li, Xiaotong Luo:
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022. Nucleic Acids Res. 50(D1): 27-38 (2022) - [j18]Yuansheng Zhang, Dong Zou, Tongtong Zhu, Tianyi Xu
, Ming Chen, Guangyi Niu, Wenting Zong
, Rong Pan, Wei Jing, Jian Sang, Chang Liu, Yujia Xiong, Yubin Sun, Shuang Zhai, Huanxin Chen, Wenming Zhao, Jing-Fa Xiao
, Yiming Bao
, Lili Hao
, Zhang Zhang
:
Gene Expression Nebulas (GEN): a comprehensive data portal integrating transcriptomic profiles across multiple species at both bulk and single-cell levels. Nucleic Acids Res. 50(D1): 1016-1024 (2022) - 2021
- [j17]Tingting Chen
, Xu Chen
, Sisi Zhang
, Junwei Zhu
, Bixia Tang
, Anke Wang
, Lili Dong
, Zhewen Zhang
, Caixia Yu
, Yanling Sun
, Lianjiang Chi
, Huanxin Chen
, Shuang Zhai
, Yubin Sun
, Li Lan
, Xin Zhang
, Jing-Fa Xiao
, Yiming Bao
, Zhang Zhang
, Wenming Zhao
:
The Genome Sequence Archive Family: Toward Explosive Data Growth and Diverse Data Types. Genom. Proteom. Bioinform. 19(4): 578-583 (2021) - [j16]Meili Chen
, Yingke Ma
, Song Wu
, Xinchang Zheng
, Hongen Kang
, Jian Sang
, Xingjian Xu
, Lili Hao
, Zhaohua Li
, Zheng Gong
, Jing-Fa Xiao
, Zhang Zhang
, Wenming Zhao
, Yiming Bao
:
Genome Warehouse: A Public Repository Housing Genome-scale Data. Genom. Proteom. Bioinform. 19(4): 584-589 (2021) - [j15]Cuiping Li, Dongmei Tian, Bixia Tang, Xiaonan Liu, Xufei Teng, Wenming Zhao, Zhang Zhang
, Shuhui Song
:
Genome Variation Map: a worldwide collection of genome variations across multiple species. Nucleic Acids Res. 49(Database-Issue): D1186-D1191 (2021) - [j14]Yongbiao Xue, Yiming Bao, Zhang Zhang, Wenming Zhao, Jing-Fa Xiao, Shunmin He, Guoqing Zhang, Yixue Li, Guoping Zhao, Runsheng Chen, Shuhui Song, Lina Ma, Dong Zou, Dongmei Tian, Cuiping Li, Junwei Zhu, Zheng Gong, Meili Chen, Anke Wang, Yingke Ma, Mengwei Li, Xufei Teng, Ying Cui, Guangya Duan, Mochen Zhang, Tong Jin, Chengmin Shi, Zhenglin Du, Yadong Zhang, Chuandong Liu, Rujiao Li, Jingyao Zeng, Lili Hao, Shuai Jiang, Hua Chen, Dali Han, Tao Zhang, Wang Kang, Fei Yang, Jing Qu, Weiqi Zhang, Guanghui Liu, Lin Liu, Yang Zhang, Guangyi Niu, Tongtong Zhu, Changrui Feng, Xiaonan Liu, Yuansheng Zhang, Zhao Li, Ruru Chen, Qianpeng Li, Zhongyi Hua, Chao Jiang, Ziyuan Chen, Fangshu He, Yuyang Zhao, Yan Jin, Luqi Huang, Yuan Yuan, Chenfen Zhou, Qingwei Xu, Sheng He, Wei Ye, Ruifang Cao, Pengyu Wang, Yunchao Ling, Xing Yan, Qingzhong Wang, Qiang Du, Wenting Zong, Hongen Kang, Zhuang Xiong, Wendi Huan, Sirui Zhang, Qiguang Xia, Xiaojuan Fan, Zefeng Wang, Xu Chen, Tingting Chen, Sisi Zhang, Bixia Tang, Lili Dong, Zhewen Zhang, Zhonghuang Wang, Hailong Kang, Yanqing Wang, Song Wu, Ming Chen, Chang Liu, Yujia Xiong, Xueying Shao, Yanyan Li, Honghong Zhou, Xiaomin Chen, Yu Zheng, Quan Kang, Di Hao, Lili Zhang, Huaxia Luo, Yajing Hao, Peng Zhang, Zhi Nie, Shuhuan Yu, Jian Sang, Zhaohua Li, Xiangquan Zhang, Qing Zhou, Shuang Zhai, Yaping Zhang, Guodong Wang, Qianghui Zhu, Xin Li, Menghua Li, Jun Yan, Chen Li, Zhennan Wang, Xiangfeng Wang
, Yuanming Liu, Hong Luo, Xiaoyuan Wu, Hai-Chun Jing, Lianhe Zhao, Jiajia Wang, Tinrui Song, Yi Zhao, Furrukh Mehmood, Shahid Ali, Amjad Ali, Shoaib Saleem, Irfan Hussain, Amir Ali Abbasi, Zhixiang Zuo, Jian Ren, Xinxin Zhang, Yun Xiao, Xia Li, Yiran Tu, Yu Xue, Wanying Wu, Peifeng Ji, Fangqing Zhao, Xianwen Meng, Di Peng, Hao Luo, Feng Gao
, Wanshan Ning, Shaofeng Lin, Teng Liu, An-Yuan Guo, Hao Yuan, Yong E. Zhang, Xiaodan Tan, Weizhi Zhang, Yubin Xie, Chenwei Wang, Chun-Jie Liu, De-Chang Yang, Feng Tian, Ge Gao, Dachao Tang, Lan Yao, Qinghua Cui, Ni A. An, Chuan-Yun Li, Xiaotong Luo:
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021. Nucleic Acids Res. 49(Database-Issue): D18-D28 (2021) - 2020
- [j13]Zhang Zhang
, Shuhui Song
, Jun Yu
, Wenming Zhao
, Jing-Fa Xiao
, Yiming Bao
:
The Elements of Data Sharing. Genom. Proteom. Bioinform. 18(1): 1-4 (2020) - [j12]Qi Liu
, Shilei Zhao
, Chengmin Shi
, Shuhui Song
, Sihui Zhu
, Yankai Su
, Wenming Zhao
, Mingkun Li
, Yiming Bao
, Yongbiao Xue
, Hua Chen
:
Population Genetics of SARS-CoV-2: Disentangling Effects of Sampling Bias and Infection Clusters. Genom. Proteom. Bioinform. 18(6): 640-647 (2020) - [j11]Shuhui Song
, Lina Ma
, Dong Zou
, Dongmei Tian
, Cuiping Li
, Junwei Zhu
, Meili Chen
, Anke Wang
, Yingke Ma
, Mengwei Li
, Xufei Teng
, Ying Cui
, Guangya Duan
, Mochen Zhang
, Tong Jin
, Chengmin Shi
, Zhenglin Du
, Yadong Zhang
, Chuandong Liu
, Rujiao Li
, Jingyao Zeng
, Lili Hao
, Shuai Jiang
, Hua Chen
, Dali Han
, Jing-Fa Xiao
, Zhang Zhang
, Wenming Zhao
, Yongbiao Xue
, Yiming Bao
:
The Global Landscape of SARS-CoV-2 Genomes, Variants, and Haplotypes in 2019nCoVR. Genom. Proteom. Bioinform. 18(6): 749-759 (2020)
2010 – 2019
- 2019
- [j10]Yongbing Zhao
, Jinyue Wang, Fang Liang, Yanxia Liu, Qi Wang, Hao Zhang, Meiye Jiang, Zhewen Zhang, Wenming Zhao, Yiming Bao
, Zhang Zhang
, Jiayan Wu
, Yan W. Asmann, Rujiao Li, Jing-Fa Xiao:
NucMap: a database of genome-wide nucleosome positioning map across species. Nucleic Acids Res. 47(Database-Issue): D163-D169 (2019) - [j9]Bixia Tang, Qing Zhou, Lili Dong, Wulue Li, Xiangquan Zhang, Li Lan, Shuang Zhai, Jing-Fa Xiao, Zhang Zhang
, Yiming Bao
, Ya-Ping Zhang, Guo-Dong Wang
, Wenming Zhao:
iDog: an integrated resource for domestic dogs and wild canids. Nucleic Acids Res. 47(Database-Issue): D793-D800 (2019) - 2018
- [j8]Bixia Tang, Feifei Li, Jing Li, Wenming Zhao, Zhihua Zhang:
Delta: a new web-based 3D genome visualization and analysis platform. Bioinform. 34(8): 1409-1410 (2018) - [j7]Guoqing Qiu, Gengyun Xiong, Wenming Zhao:
一种改进的三维Otsu图像分割算法 (Improved Three-dimensional Otsu Image Segmentation Algorithm). 计算机科学 45(8): 247-252 (2018) - [j6]Jian Sang, Zhennan Wang, Man Li, Jiabao Cao, Guangyi Niu, Lin Xia, Dong Zou, Fan Wang, Xingjian Xu, Xiaojiao Han, Jinqi Fan, Ye Yang, Wanzhu Zuo, Yang Zhang, Wenming Zhao, Yiming Bao, Jing-Fa Xiao, Songnian Hu, Lili Hao, Zhang Zhang:
ICG: a wiki-driven knowledgebase of internal control genes for RT-qPCR normalization. Nucleic Acids Res. 46(Database-Issue): D121-D126 (2018) - [j5]Rujiao Li, Fang Liang, Mengwei Li, Dong Zou
, Shixiang Sun
, Yongbing Zhao, Wenming Zhao, Yiming Bao
, Jing-Fa Xiao, Zhang Zhang
:
MethBank 3.0: a database of DNA methylomes across a variety of species. Nucleic Acids Res. 46(Database-Issue): D288-D295 (2018) - [j4]Shuhui Song, Dongmei Tian, Cuiping Li, Bixia Tang, Lili Dong, Jing-Fa Xiao, Yiming Bao
, Wenming Zhao, Hang He
, Zhang Zhang
:
Genome Variation Map: a data repository of genome variations in BIG Data Center. Nucleic Acids Res. 46(Database-Issue): D944-D949 (2018) - 2015
- [j3]Bixia Tang
, Yanqing Wang
, Junwei Zhu
, Wenming Zhao
:
Web Resources for Model Organism Studies. Genom. Proteom. Bioinform. 13(1): 64-68 (2015) - 2011
- [j2]Wenming Zhao, Wanfei Liu, Dongmei Tian, Bixia Tang, Yanqing Wang, Caixia Yu, Rujiao Li, Yunchao Ling, Jiayan Wu
, Shuhui Song, Songnian Hu
:
wapRNA: a web-based application for the processing of RNA sequences. Bioinform. 27(21): 3076-3077 (2011)
2000 – 2009
- 2004
- [j1]Wenming Zhao, Jing Wang, Ximiao He, Xiaobing Huang, Yongzhi Jiao, Mingtao Dai, Shulin Wei, Jian Fu, Ye Chen, Xiaoyu Ren, Yong Zhang, Peixiang Ni, Jianguo Zhang
, Songgang Li, Jian Wang, Gane Ka-Shu Wong
, Hongyu Zhao
, Jun Yu, Huanming Yang, Jun Wang
:
BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics. Nucleic Acids Res. 32(Database-Issue): 377-382 (2004)
Coauthor Index
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