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2020 – today
- 2025
- [j35]Shaheer U. Saeed
, Shiqi Huang, João Ramalhinho, Iani J. M. B. Gayo, Nina Montaña Brown, Ester Bonmati
, Stephen P. Pereira
, Brian R. Davidson
, Dean C. Barratt
, Matthew J. Clarkson
, Yipeng Hu
:
Competing for Pixels: A Self-Play Algorithm for Weakly-Supervised Semantic Segmentation. IEEE Trans. Pattern Anal. Mach. Intell. 47(2): 825-839 (2025) - 2024
- [j34]Iani J. M. B. Gayo
, Shaheer U. Saeed, Ester Bonmati, Dean C. Barratt, Matthew J. Clarkson
, Yipeng Hu:
The distinct roles of reinforcement learning between pre-procedure and intra-procedure planning for prostate biopsy. Int. J. Comput. Assist. Radiol. Surg. 19(6): 1003-1012 (2024) - [j33]Ashkan Pakzad
, Wing Keung Cheung
, Coline H. M. Van Moorsel, Kin Quan, Nesrin Mogulkoc, Brian J. Bartholmai, H. W. Van Es, Alper Ezircan, Frouke Van Beek, Marcel Veltkamp, Ronald A. Karwoski, T. Peikert, R. D. Clay, Finbar Foley, Cassandra Braun, Recep Savas, Carole H. Sudre
, Tom Doel, Daniel C. Alexander
, Peter A. Wijeratne
, Dave Hawkes, Yipeng Hu, John R. Hurst
, Joseph Jacob:
Evaluation of automated airway morphological quantification for assessing fibrosing lung disease. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 12(1) (2024) - [j32]Wing Keung Cheung
, Ashkan Pakzad
, Nesrin Mogulkoc, Sarah Needleman, Bojidar Rangelov, Eyjolfur Gudmundsson, An Zhao, Mariam Abbas, Davina McLaverty, Dimitrios Asimakopoulos, Robert Chapman, Recep Savas, Sam M. Janes, Yipeng Hu, Daniel C. Alexander
, John R. Hurst
, Joseph Jacob:
Interpolation-split: a data-centric deep learning approach with big interpolated data to boost airway segmentation performance. J. Big Data 11(1): 104 (2024) - [j31]Wen Yan
, Bernard Chiu
, Ziyi Shen, Qianye Yang
, Tom Syer
, Zhe Min, Shonit Punwani
, Mark Emberton
, David Atkinson
, Dean C. Barratt
, Yipeng Hu
:
Combiner and HyperCombiner networks: Rules to combine multimodality MR images for prostate cancer localisation. Medical Image Anal. 91: 103030 (2024) - [j30]Yukun Zhou
, Moucheng Xu
, Yipeng Hu, Stefano B. Blumberg
, An Zhao, Siegfried K. Wagner
, Pearse A. Keane
, Daniel C. Alexander
:
CF-Loss: Clinically-relevant feature optimised loss function for retinal multi-class vessel segmentation and vascular feature measurement. Medical Image Anal. 93: 103098 (2024) - [j29]Moucheng Xu
, Yukun Zhou
, Chen Jin
, Marius de Groot
, Daniel C. Alexander
, Neil P. Oxtoby
, Yipeng Hu
, Joseph Jacob
:
Expectation maximisation pseudo labels. Medical Image Anal. 94: 103125 (2024) - [j28]Shaheer U. Saeed
, João Ramalhinho
, Mark A. Pinnock
, Ziyi Shen, Yunguan Fu
, Nina Montaña Brown
, Ester Bonmati
, Dean C. Barratt
, Stephen P. Pereira
, Brian R. Davidson
, Matthew J. Clarkson
, Yipeng Hu
:
Active learning using adaptable task-based prioritisation. Medical Image Anal. 95: 103181 (2024) - [j27]Qi Li, Ziyi Shen, Qian Li
, Dean C. Barratt
, Thomas Dowrick, Matthew J. Clarkson
, Tom Vercauteren
, Yipeng Hu
:
Long-Term Dependency for 3D Reconstruction of Freehand Ultrasound Without External Tracker. IEEE Trans. Biomed. Eng. 71(3): 1033-1042 (2024) - [c63]Martynas Pocius, Wen Yan, Dean C. Barratt, Mark Emberton, Matthew J. Clarkson
, Yipeng Hu, Shaheer U. Saeed:
Weakly Supervised Localisation of Prostate Cancer Using Reinforcement Learning for Bi-Parametric MR Images. ISBI 2024: 1-5 - [c62]Zhe Min, Zachary M. C. Baum, Shaheer U. Saeed, Mark Emberton, Dean C. Barratt, Zeike A. Taylor, Yipeng Hu:
Biomechanics-Informed Non-rigid Medical Image Registration and its Inverse Material Property Estimation with Linear and Nonlinear Elasticity. MICCAI (2) 2024: 564-574 - [c61]Yinsong Xu, Yipei Wang, Ziyi Shen, Iani J. M. B. Gayo, Natasha Thorley, Shonit Punwani, Aidong Men, Dean C. Barratt, Qingchao Chen, Yipeng Hu:
Poisson Ordinal Network for Gleason Group Estimation Using Bi-Parametric MRI. MICCAI (5) 2024: 564-574 - [c60]Shiqi Huang, Tingfa Xu, Ziyi Shen, Shaheer Ullah Saeed, Wen Yan, Dean C. Barratt, Yipeng Hu:
One Registration is Worth Two Segmentations. MICCAI (12) 2024: 665-675 - [c59]Qi Li, Ziyi Shen, Qianye Yang, Dean C. Barratt, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu:
Nonrigid Reconstruction of Freehand Ultrasound Without a Tracker. MICCAI (4) 2024: 689-699 - [c58]Yaxi Chen, Aleksandra Ivanova, Shaheer U. Saeed
, Rikin Hargunani
, Jie Huang
, Chaozong Liu
, Yipeng Hu
:
Segmentation by Registration-Enabled SAM Prompt Engineering Using Five Reference Images. WBIR 2024: 241-252 - [i70]Yiwen Li, Yunguan Fu, Iani J. M. B. Gayo, Qianye Yang, Zhe Min, Shaheer U. Saeed, Wen Yan, Yipei Wang, J. Alison Noble, Mark Emberton, Matthew J. Clarkson, Dean C. Barratt, Victor A. Prisacariu, Yipeng Hu:
Semi-weakly-supervised neural network training for medical image registration. CoRR abs/2402.10728 (2024) - [i69]Martynas Pocius, Wen Yan, Dean C. Barratt, Mark Emberton, Matthew J. Clarkson, Yipeng Hu, Shaheer U. Saeed:
Weakly supervised localisation of prostate cancer using reinforcement learning for bi-parametric MR images. CoRR abs/2402.13778 (2024) - [i68]Shiqi Huang, Tingfa Xu, Ziyi Shen, Shaheer Ullah Saeed, Wen Yan, Dean C. Barratt, Yipeng Hu:
One registration is worth two segmentations. CoRR abs/2405.10879 (2024) - [i67]Shaheer U. Saeed, Shiqi Huang, João Ramalhinho, Iani J. M. B. Gayo, Nina Montaña Brown, Ester Bonmati, Stephen P. Pereira
, Brian R. Davidson, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu:
Competing for pixels: a self-play algorithm for weakly-supervised segmentation. CoRR abs/2405.16628 (2024) - [i66]Zhe Min, Zachary M. C. Baum, Shaheer U. Saeed, Mark Emberton, Dean C. Barratt, Zeike A. Taylor, Yipeng Hu:
Biomechanics-informed Non-rigid Medical Image Registration and its Inverse Material Property Estimation with Linear and Nonlinear Elasticity. CoRR abs/2407.03292 (2024) - [i65]Qi Li, Ziyi Shen, Qianye Yang, Dean C. Barratt, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu:
Nonrigid Reconstruction of Freehand Ultrasound without a Tracker. CoRR abs/2407.05767 (2024) - [i64]Yinsong Xu, Yipei Wang, Ziyi Shen, Iani J. M. B. Gayo, Natasha Thorley, Shonit Punwani, Aidong Men, Dean C. Barratt, Qingchao Chen
, Yipeng Hu:
Poisson Ordinal Network for Gleason Group Estimation Using Bi-Parametric MRI. CoRR abs/2407.05796 (2024) - [i63]Yaxi Chen, Aleksandra Ivanova, Shaheer U. Saeed, Rikin Hargunani, Jie Huang, Chaozong Liu, Yipeng Hu:
Segmentation by registration-enabled SAM prompt engineering using five reference images. CoRR abs/2407.17933 (2024) - [i62]Yutong He, Pengrui Li, Yipeng Hu, Chuyan Chen, Kun Yuan:
Subspace Optimization for Large Language Models with Convergence Guarantees. CoRR abs/2410.11289 (2024) - [i61]Shiqi Huang, Tingfa Xu, Ziyi Shen, Shaheer Ullah Saeed, Wen Yan, Dean C. Barratt, Yipeng Hu:
SAMReg: SAM-enabled Image Registration with ROI-based Correspondence. CoRR abs/2410.14083 (2024) - [i60]Xiangcen Wu, Yipei Wang, Qianye Yang, Natasha Thorley, Shonit Punwani, Veeru Kasivisvanathan, Ester Bonmati, Yipeng Hu:
AI-assisted prostate cancer detection and localisation on biparametric MR by classifying radiologist-positives. CoRR abs/2410.23084 (2024) - [i59]Weixi Yi, Yipei Wang, Natasha Thorley, Alexander Ng, Shonit Punwani, Veeru Kasivisvanathan, Dean C. Barratt, Shaheer Ullah Saeed, Yipeng Hu:
T2-Only Prostate Cancer Prediction by Meta-Learning from Bi-Parametric MR Imaging. CoRR abs/2411.07416 (2024) - 2023
- [j26]Mark A. Pinnock
, Yipeng Hu, Steve Bandula, Dean C. Barratt:
Multi-phase synthetic contrast enhancement in interventional computed tomography for guiding renal cryotherapy. Int. J. Comput. Assist. Radiol. Surg. 18(8): 1437-1449 (2023) - [j25]Yiwen Li
, Yunguan Fu
, Iani J. M. B. Gayo
, Qianye Yang
, Zhe Min, Shaheer U. Saeed
, Wen Yan
, Yipei Wang
, J. Alison Noble
, Mark Emberton
, Matthew J. Clarkson
, Henkjan Huisman
, Dean C. Barratt
, Victor Adrian Prisacariu
, Yipeng Hu
:
Prototypical few-shot segmentation for cross-institution male pelvic structures with spatial registration. Medical Image Anal. 90: 102935 (2023) - [j24]Zachary M. C. Baum
, Yipeng Hu
, Dean C. Barratt
:
Meta-Learning Initializations for Interactive Medical Image Registration. IEEE Trans. Medical Imaging 42(3): 823-833 (2023) - [c57]Zhe Min, Zachary M. C. Baum, Shaheer U. Saeed, Mark Emberton, Dean C. Barratt, Zeike A. Taylor, Yipeng Hu:
Non-rigid Medical Image Registration using Physics-informed Neural Networks. IPMI 2023: 601-613 - [c56]Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson
, Tom Vercauteren
, Yipeng Hu:
Trackerless Freehand Ultrasound with Sequence Modelling and Auxiliary Transformation Over Past and Future Frames. ISBI 2023: 1-5 - [c55]Yucheng Tang, Yipeng Hu, Jing Li, Hu Lin, Xiang Xu, Ke Huang, Hongxiang Lin:
PLD-AL: Pseudo-label Divergence-Based Active Learning in Carotid Intima-Media Segmentation for Ultrasound Images. MICCAI (2) 2023: 57-67 - [c54]Yunguan Fu
, Yiwen Li
, Shaheer U. Saeed
, Matthew J. Clarkson
, Yipeng Hu
:
Importance of Aligning Training Strategy with Evaluation for Diffusion Models in 3D Multiclass Segmentation. DGM4MICCAI 2023: 86-95 - [c53]Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson
, Tom Vercauteren
, Yipeng Hu:
Privileged Anatomical and Protocol Discrimination in Trackerless 3D Ultrasound Reconstruction. ASMUS@MICCAI 2023: 142-151 - [c52]Shaheer U. Saeed, Tom Syer, Wen Yan, Qianye Yang, Mark Emberton, Shonit Punwani, Matthew John Clarkson, Dean C. Barratt, Yipeng Hu:
Bi-parametric prostate MR image synthesis using pathology and sequence-conditioned stable diffusion. MIDL 2023: 814-828 - [c51]Qian Li, Yunguan Fu, Qianye Yang, Zhijiang Du, Hongjian Yu, Yipeng Hu:
Spatial Correspondence between Graph Neural Network-Segmented Images. MIDL 2023: 1067-1084 - [c50]Weixi Yi, Vasilis Stavrinides
, Zachary M. C. Baum, Qianye Yang, Dean C. Barratt, Matthew J. Clarkson
, Yipeng Hu, Shaheer U. Saeed:
Boundary-RL: Reinforcement Learning for Weakly-Supervised Prostate Segmentation in TRUS Images. MLMI@MICCAI (1) 2023: 277-288 - [c49]Nina Montaña Brown, Shaheer U. Saeed, Ahmed Abdulaal, Thomas Dowrick, Yakup Kilic, Sophie Wilkinson, Jack Gao, Meghavi Mashar, Chloe He, Alkisti Stavropoulou, Emma Thomson, Zachary M. C. Baum, Simone Foti, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson:
SARAMIS: Simulation Assets for Robotic Assisted and Minimally Invasive Surgery. NeurIPS 2023 - [i58]Zhe Min, Zachary M. C. Baum, Shaheer U. Saeed, Mark Emberton, Dean C. Barratt, Zeike A. Taylor, Yipeng Hu:
Non-rigid Medical Image Registration using Physics-informed Neural Networks. CoRR abs/2302.10343 (2023) - [i57]Shaheer U. Saeed, Tom Syer, Wen Yan, Qianye Yang, Mark Emberton, Shonit Punwani, Matthew J. Clarkson, Dean C. Barratt, Yipeng Hu:
Bi-parametric prostate MR image synthesis using pathology and sequence-conditioned stable diffusion. CoRR abs/2303.02094 (2023) - [i56]Yunguan Fu, Yiwen Li, Shaheer U. Saeed, Matthew J. Clarkson, Yipeng Hu:
Importance of Aligning Training Strategy with Evaluation for Diffusion Models in 3D Multiclass Segmentation. CoRR abs/2303.06040 (2023) - [i55]Qian Li, Yunguan Fu, Qianye Yang, Zhijiang Du, Hongjian Yu, Yipeng Hu:
Spatial Correspondence between Graph Neural Network-Segmented Images. CoRR abs/2303.06550 (2023) - [i54]Mou-Cheng Xu, Yukun Zhou, Chen Jin, Marius de Groot, Daniel C. Alexander
, Neil P. Oxtoby, Yipeng Hu, Joseph Jacob:
Expectation Maximization Pseudo Labelling for Segmentation with Limited Annotations. CoRR abs/2305.01747 (2023) - [i53]Wen Yan, Bernard Chiu, Ziyi Shen, Qianye Yang, Tom Syer, Zhe Min, Shonit Punwani, Mark Emberton, David Atkinson, Dean C. Barratt, Yipeng Hu:
Combiner and HyperCombiner Networks: Rules to Combine Multimodality MR Images for Prostate Cancer Localisation. CoRR abs/2307.08279 (2023) - [i52]Wing Keung Cheung
, Ashkan Pakzad
, Nesrin Mogulkoc, Sarah Needleman, Bojidar Rangelov, Eyjolfur Gudmundsson, An Zhao, Mariam Abbas, Davina McLaverty, Dimitrios Asimakopoulos, Robert Chapman, Recep Savas, Sam M. Janes, Yipeng Hu, Daniel C. Alexander, John R. Hurst, Joseph Jacob:
A data-centric deep learning approach to airway segmentation. CoRR abs/2308.00008 (2023) - [i51]Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu:
Privileged Anatomical and Protocol Discrimination in Trackerless 3D Ultrasound Reconstruction. CoRR abs/2308.10293 (2023) - [i50]Weixi Yi, Vasilis Stavrinides
, Zachary M. C. Baum, Qianye Yang, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu, Shaheer U. Saeed:
Boundary-RL: Reinforcement Learning for Weakly-Supervised Prostate Segmentation in TRUS Images. CoRR abs/2308.11376 (2023) - [i49]Yunguan Fu
, Yiwen Li, Shaheer U. Saeed, Matthew J. Clarkson, Yipeng Hu:
A Recycling Training Strategy for Medical Image Segmentation with Diffusion Denoising Models. CoRR abs/2308.16355 (2023) - [i48]Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu:
Long-term Dependency for 3D Reconstruction of Freehand Ultrasound Without External Tracker. CoRR abs/2310.10248 (2023) - 2022
- [j23]Yipei Wang
, Qianye Yang, Lior Drukker, Aris T. Papageorghiou
, Yipeng Hu, J. Alison Noble:
Task model-specific operator skill assessment in routine fetal ultrasound scanning. Int. J. Comput. Assist. Radiol. Surg. 17(8): 1437-1444 (2022) - [j22]João Ramalhinho
, Bongjin Koo, Nina Montaña Brown
, Shaheer U. Saeed
, Ester Bonmati, Kurinchi Gurusamy
, Stephen P. Pereira
, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson
:
Deep hashing for global registration of untracked 2D laparoscopic ultrasound to CT. Int. J. Comput. Assist. Radiol. Surg. 17(8): 1461-1468 (2022) - [j21]Shaheer U. Saeed
, Yunguan Fu
, Vasilis Stavrinides
, Zachary M. C. Baum
, Qianye Yang, Mirabela Rusu
, Richard E. Fan
, Geoffrey A. Sonn
, J. Alison Noble
, Dean C. Barratt
, Yipeng Hu
:
Image quality assessment for machine learning tasks using meta-reinforcement learning. Medical Image Anal. 78: 102427 (2022) - [j20]Sulaiman Vesal
, Iani J. M. B. Gayo, Indrani Bhattacharya
, Shyam Natarajan, Leonard S. Marks, Dean C. Barratt
, Richard E. Fan
, Yipeng Hu
, Geoffrey A. Sonn
, Mirabela Rusu
:
Domain generalization for prostate segmentation in transrectal ultrasound images: A multi-center study. Medical Image Anal. 82: 102620 (2022) - [j19]Ester Bonmati
, Yipeng Hu
, Alexander Grimwood, Gavin J. Johnson, George Goodchild, Margaret G. Keane
, Kurinchi Gurusamy
, Brian R. Davidson
, Matthew J. Clarkson
, Stephen P. Pereira
, Dean C. Barratt
:
Voice-Assisted Image Labeling for Endoscopic Ultrasound Classification Using Neural Networks. IEEE Trans. Medical Imaging 41(6): 1311-1319 (2022) - [j18]Qianye Yang
, David Atkinson
, Yunguan Fu
, Tom Syer
, Wen Yan
, Shonit Punwani
, Matthew J. Clarkson
, Dean C. Barratt
, Tom Vercauteren
, Yipeng Hu
:
Cross-Modality Image Registration Using a Training-Time Privileged Third Modality. IEEE Trans. Medical Imaging 41(11): 3421-3431 (2022) - [c48]Yiwen Li
, Yunguan Fu
, Qianye Yang, Zhe Min, Wen Yan
, Henkjan J. Huisman
, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu:
FEW-SHOT Image Segmentation for Cross-Institution Male Pelvic Organs Using Registration-Assisted Prototypical Learning. ISBI 2022: 1-5 - [c47]Shahab Aslani, Watjana Lilaonitkul, Vaishnavi Gnanananthan, Divya Raj, Bojidar Rangelov, Alexandra L. Young, Yipeng Hu, Paul Taylor
, Daniel C. Alexander
, Joseph Jacob:
Optimising Chest X-Rays for Image Analysis by Identifying and Removing Confounding Factors. MICAD 2022: 245-254 - [c46]Pierre Raillard, Lorenzo Cristoni, Andrew Walden, Roberto Lazzari, Thomas Pulimood, Louis Grandjean
, Claudia A. M. Gandini Wheeler-Kingshott
, Yipeng Hu, Zachary M. C. Baum
:
Rapid Lung Ultrasound COVID-19 Severity Scoring with Resource-Efficient Deep Feature Extraction. ASMUS@MICCAI 2022: 3-12 - [c45]Wen Yan
, Qianye Yang, Tom Syer, Zhe Min, Shonit Punwani, Mark Emberton, Dean C. Barratt, Bernard Chiu
, Yipeng Hu:
The Impact of Using Voxel-Level Segmentation Metrics on Evaluating Multifocal Prostate Cancer Localisation. AMAI@MICCAI 2022: 128-138 - [c44]Zachary M. C. Baum
, Tamas Ungi, Christopher Schlenger, Yipeng Hu, Dean C. Barratt:
Learning Generalized Non-rigid Multimodal Biomedical Image Registration from Generic Point Set Data. ASMUS@MICCAI 2022: 141-151 - [c43]Iani J. M. B. Gayo, Shaheer U. Saeed, Dean C. Barratt, Matthew J. Clarkson
, Yipeng Hu:
Strategising Template-Guided Needle Placement for MR-targeted Prostate Biopsy. CaPTion@MICCAI 2022: 149-158 - [c42]Zachary M. C. Baum
, Yipeng Hu, Dean C. Barratt:
Meta-registration: Learning Test-Time Optimization for Single-Pair Image Registration. ASMUS@MICCAI 2022: 162-171 - [c41]Nina Montaña Brown
, João Ramalhinho
, Bongjin Koo, Moustafa Allam, Brian R. Davidson, Kurinchi Gurusamy
, Yipeng Hu, Matthew J. Clarkson
:
Towards Multi-modal Self-supervised Video and Ultrasound Pose Estimation for Laparoscopic Liver Surgery. ASMUS@MICCAI 2022: 183-192 - [c40]Ziyi Shen, Qianye Yang, Yuming Shen, Francesco Giganti, Vasilis Stavrinides
, Richard E. Fan
, Caroline M. Moore
, Mirabela Rusu
, Geoffrey A. Sonn
, Philip H. S. Torr, Dean C. Barratt, Yipeng Hu:
Collaborative Quantization Embeddings for Intra-subject Prostate MR Image Registration. MICCAI (6) 2022: 237-247 - [c39]Mou-Cheng Xu, Yukun Zhou
, Chen Jin, Marius de Groot, Daniel C. Alexander
, Neil P. Oxtoby, Yipeng Hu, Joseph Jacob:
Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi-supervised Segmentation. MICCAI (5) 2022: 580-590 - [e3]Stephen R. Aylward
, J. Alison Noble
, Yipeng Hu
, Su-Lin Lee
, Zachary Baum
, Zhe Min
:
Simplifying Medical Ultrasound - Third International Workshop, ASMUS 2022, Held in Conjunction with MICCAI 2022, Singapore, September 18, 2022, Proceedings. Lecture Notes in Computer Science 13565, Springer 2022, ISBN 978-3-031-16901-4 [contents] - [d3]Yiwen Li
, Yunguan Fu
, Iani J. M. B. Gayo
, Qianye Yang
, Zhe Min
, Shaheer U. Saeed
, Wen Yan
, Yipei Wang
, J. Alison Noble
, Mark Emberton
, Matthew J. Clarkson
, Henkjan Huisman
, Dean C. Barratt
, Victor A. Prisacariu
, Yipeng Hu
:
Cross-institution Male Pelvic Structures. Zenodo, 2022 - [d2]Qi Li
, Ziyi Shen
, Qian Li
, Dean C. Barratt
, Thomas Dowrick
, Matthew J. Clarkson
, Tom Vercauteren
, Yipeng Hu
:
Freehand ultrasound without external trackers. Zenodo, 2022 - [i47]Yiwen Li, Yunguan Fu, Qianye Yang, Zhe Min, Wen Yan, Henkjan J. Huisman, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu:
Few-shot image segmentation for cross-institution male pelvic organs using registration-assisted prototypical learning. CoRR abs/2201.06358 (2022) - [i46]Shaheer U. Saeed, Wen Yan, Yunguan Fu, Francesco Giganti, Qianye Yang, Zachary M. C. Baum, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, Mark Emberton, Dean C. Barratt, Yipeng Hu:
Image quality assessment by overlapping task-specific and task-agnostic measures: application to prostate multiparametric MR images for cancer segmentation. CoRR abs/2202.09798 (2022) - [i45]Yukun Zhou, Moucheng Xu, Yipeng Hu, Stefano B. Blumberg, An Zhao, Siegfried K. Wagner, Pearse A. Keane, Daniel C. Alexander:
VAFO-Loss: VAscular Feature Optimised Loss Function for Retinal Artery/Vein Segmentation. CoRR abs/2203.06425 (2022) - [i44]Shaheer U. Saeed, Yunguan Fu, Vasilis Stavrinides
, Zachary M. C. Baum, Qianye Yang, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, J. Alison Noble, Dean C. Barratt, Yipeng Hu:
Image quality assessment for machine learning tasks using meta-reinforcement learning. CoRR abs/2203.14258 (2022) - [i43]Wen Yan, Qianye Yang, Tom Syer, Zhe Min, Shonit Punwani, Mark Emberton, Dean C. Barratt, Bernard Chiu, Yipeng Hu:
The impact of using voxel-level segmentation metrics on evaluating multifocal prostate cancer localisation. CoRR abs/2203.16415 (2022) - [i42]Ziyi Shen, Qianye Yang, Yuming Shen, Francesco Giganti, Vasilis Stavrinides
, Richard E. Fan, Caroline M. Moore
, Mirabela Rusu, Geoffrey A. Sonn, Philip H. S. Torr, Dean C. Barratt, Yipeng Hu:
Collaborative Quantization Embeddings for Intra-Subject Prostate MR Image Registration. CoRR abs/2207.06189 (2022) - [i41]Iani J. M. B. Gayo, Shaheer U. Saeed, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu:
Strategising template-guided needle placement for MR-targeted prostate biopsy. CoRR abs/2207.10784 (2022) - [i40]Zachary M. C. Baum, Tamas Ungi, Christopher Schlenger, Yipeng Hu, Dean C. Barratt:
Learning Generalized Non-Rigid Multimodal Biomedical Image Registration from Generic Point Set Data. CoRR abs/2207.10994 (2022) - [i39]Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt:
Meta-Registration: Learning Test-Time Optimization for Single-Pair Image Registration. CoRR abs/2207.10996 (2022) - [i38]Pierre Raillard, Lorenzo Cristoni, Andrew Walden, Roberto Lazzari, Thomas Pulimood, Louis Grandjean, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu, Zachary M. C. Baum:
Rapid Lung Ultrasound COVID-19 Severity Scoring with Resource-Efficient Deep Feature Extraction. CoRR abs/2207.10998 (2022) - [i37]Qianye Yang, David Atkinson
, Yunguan Fu, Tom Syer, Wen Yan, Shonit Punwani, Matthew J. Clarkson, Dean C. Barratt, Tom Vercauteren, Yipeng Hu:
Cross-Modality Image Registration using a Training-Time Privileged Third Modality. CoRR abs/2207.12901 (2022) - [i36]Mou-Cheng Xu, Yukun Zhou
, Chen Jin, Marius de Groot, Daniel C. Alexander
, Neil P. Oxtoby, Yipeng Hu, Joseph Jacob:
Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi-Supervised Segmentation. CoRR abs/2208.04435 (2022) - [i35]Shahab Aslani, Watjana Lilaonitkul, Vaishnavi Gnanananthan, Divya Raj, Bojidar Rangelov, Alexandra L. Young
, Yipeng Hu, Paul Taylor
, Daniel C. Alexander
, Joseph Jacob:
Optimising Chest X-Rays for Image Analysis by Identifying and Removing Confounding Factors. CoRR abs/2208.10320 (2022) - [i34]Sulaiman Vesal, Iani J. M. B. Gayo, Indrani Bhattacharya, Shyam Natarajan, Leonard S. Marks, Dean C. Barratt, Richard E. Fan, Yipeng Hu, Geoffrey A. Sonn, Mirabela Rusu:
Domain Generalization for Prostate Segmentation in Transrectal Ultrasound Images: A Multi-center Study. CoRR abs/2209.02126 (2022) - [i33]Yiwen Li, Yunguan Fu, Iani J. M. B. Gayo, Qianye Yang, Zhe Min, Shaheer U. Saeed, Wen Yan, Yipei Wang, J. Alison Noble, Mark Emberton, Matthew J. Clarkson
, Henkjan J. Huisman
, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu:
Prototypical few-shot segmentation for cross-institution male pelvic structures with spatial registration. CoRR abs/2209.05160 (2022) - [i32]Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt:
Meta-Learning Initializations for Interactive Medical Image Registration. CoRR abs/2210.15371 (2022) - [i31]M. Jorge Cardoso, Wenqi Li, Richard Brown, Nic Ma, Eric Kerfoot, Yiheng Wang, Benjamin Murray, Andriy Myronenko
, Can Zhao, Dong Yang, Vishwesh Nath, Yufan He, Ziyue Xu, Ali Hatamizadeh, Wentao Zhu, Yun Liu, Mingxin Zheng, Yucheng Tang, Isaac Yang, Michael Zephyr, Behrooz Hashemian, Sachidanand Alle, Mohammad Zalbagi Darestani, Charlie Budd, Marc Modat, Tom Vercauteren, Guotai Wang
, Yiwen Li
, Yipeng Hu, Yunguan Fu
, Benjamin Gorman, Hans J. Johnson
, Brad W. Genereaux, Barbaros S. Erdal, Vikash Gupta, Andres Diaz-Pinto, Andre Dourson, Lena Maier-Hein, Paul F. Jaeger, Michael Baumgartner, Jayashree Kalpathy-Cramer, Mona Flores, Justin S. Kirby
, Lee A. D. Cooper, Holger R. Roth, Daguang Xu, David Bericat, Ralf Floca, S. Kevin Zhou, Haris Shuaib, Keyvan Farahani, Klaus H. Maier-Hein, Stephen R. Aylward
, Prerna Dogra, Sébastien Ourselin, Andrew Feng:
MONAI: An open-source framework for deep learning in healthcare. CoRR abs/2211.02701 (2022) - [i30]Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu:
Trackerless freehand ultrasound with sequence modelling and auxiliary transformation over past and future frames. CoRR abs/2211.04867 (2022) - [i29]Shaheer U. Saeed, João Ramalhinho, Mark A. Pinnock, Ziyi Shen, Yunguan Fu, Nina Montaña Brown, Ester Bonmati, Dean C. Barratt, Stephen P. Pereira, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu:
Active learning using adaptable task-based prioritisation. CoRR abs/2212.01703 (2022) - 2021
- [j17]Nina Montaña Brown
, João Ramalhinho
, Moustafa Allam, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson
:
Vessel segmentation for automatic registration of untracked laparoscopic ultrasound to CT of the liver. Int. J. Comput. Assist. Radiol. Surg. 16(7): 1151-1160 (2021) - [j16]Zachary M. C. Baum
, Yipeng Hu, Dean C. Barratt:
Real-time multimodal image registration with partial intraoperative point-set data. Medical Image Anal. 74: 102231 (2021) - [j15]Anna Jobin, Kingson Man, Antonio Damasio, Georgios Kaissis, Rickmer Braren, Julia Stoyanovich, Jay J. Van Bavel, Tessa V. West, Brent D. Mittelstadt, Jason Eshraghian
, Marta R. Costa-jussà, Asaf Tzachor, Aimun A. B. Jamjoom, Mariarosaria Taddeo, Edoardo Sinibaldi, Yipeng Hu, Miguel A. Luengo-Oroz
:
AI reflections in 2020. Nat. Mach. Intell. 3(1): 2-8 (2021) - [c38]Yiwen Li, Gratianus Wesley Putra Data, Yunguan Fu, Yipeng Hu, Victor Adrian Prisacariu:
Few-shot Semantic Segmentation with Self-supervision from Pseudo-classes. BMVC 2021: 164 - [c37]Shaheer U. Saeed
, Yunguan Fu
, Zachary M. C. Baum
, Qianye Yang, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, Dean C. Barratt, Yipeng Hu:
Learning Image Quality Assessment by Reinforcing Task Amenable Data Selection. IPMI 2021: 755-766 - [c36]Qianye Yang, Tom Vercauteren
, Yunguan Fu
, Francesco Giganti, Nooshin Ghavami, Vasilis Stavrinides
, Caroline M. Moore
, Matthew J. Clarkson
, Dean C. Barratt, Yipeng Hu:
Morphological Change Forecasting For Prostate Glands Using Feature-Based Registration And Kernel Density Extrapolation. ISBI 2021: 1072-1076 - [c35]Liam F. Chalcroft
, Jiongqi Qu, Sophie A. Martin
, Iani J. M. B. Gayo, Giulio V. Minore
, Imraj R. D. Singh, Shaheer U. Saeed
, Qianye Yang, Zachary M. C. Baum
, André Altmann
, Yipeng Hu:
Development and Evaluation of Intraoperative Ultrasound Segmentation with Negative Image Frames and Multiple Observer Labels. ASMUS@MICCAI 2021: 25-34 - [c34]Harry Mason
, Lorenzo Cristoni, Andrew Walden, Roberto Lazzari, Thomas Pulimood, Louis Grandjean
, Claudia A. M. Gandini Wheeler-Kingshott
, Yipeng Hu, Zachary M. C. Baum
:
Lung Ultrasound Segmentation and Adaptation Between COVID-19 and Community-Acquired Pneumonia. ASMUS@MICCAI 2021: 45-53 - [c33]Alexander Grimwood, João Ramalhinho
, Zachary M. C. Baum
, Nina Montaña Brown
, Gavin J. Johnson, Yipeng Hu, Matthew J. Clarkson
, Stephen P. Pereira
, Dean C. Barratt, Ester Bonmati:
Endoscopic Ultrasound Image Synthesis Using a Cycle-Consistent Adversarial Network. ASMUS@MICCAI 2021: 169-178 - [c32]Shaheer U. Saeed
, Yunguan Fu
, Vasilis Stavrinides
, Zachary M. C. Baum
, Qianye Yang, Mirabela Rusu
, Richard E. Fan
, Geoffrey A. Sonn
, J. Alison Noble, Dean C. Barratt, Yipeng Hu:
Adaptable Image Quality Assessment Using Meta-Reinforcement Learning of Task Amenability. ASMUS@MICCAI 2021: 191-201 - [c31]Yukun Zhou
, Moucheng Xu, Yipeng Hu, Hongxiang Lin
, Joseph Jacob, Pearse A. Keane
, Daniel C. Alexander
:
Learning to Address Intra-segment Misclassification in Retinal Imaging. MICCAI (1) 2021: 482-492 - [c30]