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Dzhoshkun I. Shakir
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2020 – today
- 2022
- [j9]Christian Baker
, Miguel Xochicale
, Fang-Yu Lin
, Sunish Mathews
, Francois Joubert, Dzhoshkun I. Shakir
, Richard Miles
, Charles A. Mosse
, Tianrui Zhao
, Weidong Liang
, Yada Kunpalin
, Brian Dromey
, Talisa Mistry
, Neil J. Sebire
, Edward Zhang
, Sébastien Ourselin
, Paul C. Beard
, Anna L. David
, Adrien E. Desjardins
, Tom Vercauteren
, Wenfeng Xia
:
Intraoperative Needle Tip Tracking with an Integrated Fibre-Optic Ultrasound Sensor. Sensors 22(23): 9035 (2022) - 2021
- [j8]Agnieszka Barbara Szczotka
, Dzhoshkun Ismail Shakir
, Matthew J. Clarkson
, Stephen P. Pereira
, Tom Vercauteren
:
Zero-Shot Super-Resolution With a Physically-Motivated Downsampling Kernel for Endomicroscopy. IEEE Trans. Medical Imaging 40(7): 1863-1874 (2021) - [i6]Agnieszka Barbara Szczotka, Dzhoshkun Ismail Shakir, Matthew J. Clarkson, Stephen P. Pereira, Tom Vercauteren:
Zero-shot super-resolution with a physically-motivated downsampling kernel for endomicroscopy. CoRR abs/2103.14015 (2021) - 2020
- [j7]Agnieszka Barbara Szczotka
, Dzhoshkun Ismail Shakir, Daniele Ravì
, Matthew J. Clarkson
, Stephen P. Pereira
, Tom Vercauteren
:
Learning from irregularly sampled data for endomicroscopy super-resolution: a comparative study of sparse and dense approaches. Int. J. Comput. Assist. Radiol. Surg. 15(7): 1167-1175 (2020) - [i5]Loïc Peter, Marcel Tella-Amo, Dzhoshkun Ismail Shakir, Jan Deprest, Sébastien Ourselin, Juan Eugenio Iglesias, Tom Vercauteren:
Active Annotation of Informative Overlapping Frames in Video Mosaicking Applications. CoRR abs/2012.15343 (2020)
2010 – 2019
- 2019
- [i4]Agnieszka Barbara Szczotka, Dzhoshkun Ismail Shakir, Daniele Ravì, Matthew J. Clarkson, Stephen P. Pereira, Tom Vercauteren:
Learning from Irregularly Sampled Data for Endomicroscopy Super-resolution: A Comparative Study of Sparse and Dense Approaches. CoRR abs/1911.13169 (2019) - 2018
- [j6]Loïc Peter
, Marcel Tella-Amo, Dzhoshkun Ismail Shakir, George Attilakos, Ruwan Wimalasundera, Jan Deprest
, Sébastien Ourselin
, Tom Vercauteren
:
Retrieval and registration of long-range overlapping frames for scalable mosaicking of in vivo fetoscopy. Int. J. Comput. Assist. Radiol. Surg. 13(5): 713-720 (2018) - [j5]Daniele Ravì
, Agnieszka Barbara Szczotka
, Dzhoshkun Ismail Shakir
, Stephen P. Pereira
, Tom Vercauteren
:
Effective deep learning training for single-image super-resolution in endomicroscopy exploiting video-registration-based reconstruction. Int. J. Comput. Assist. Radiol. Surg. 13(6): 917-924 (2018) - [j4]Eli Gibson
, Wenqi Li
, Carole H. Sudre
, Lucas Fidon
, Dzhoshkun I. Shakir
, Guotai Wang
, Zach Eaton-Rosen, Robert J. Gray, Tom Doel
, Yipeng Hu
, Tom Whyntie
, Parashkev Nachev, Marc Modat
, Dean C. Barratt, Sébastien Ourselin
, M. Jorge Cardoso
, Tom Vercauteren
:
NiftyNet: a deep-learning platform for medical imaging. Comput. Methods Programs Biomed. 158: 113-122 (2018) - [c9]Marcel Tella-Amo, Loïc Peter, Dzhoshkun I. Shakir, Jan Deprest, Danail Stoyanov
, Juan Eugenio Iglesias
, Tom Vercauteren
, Sébastien Ourselin
:
Technical note: probabilistic visual and electromagnetic data fusion for robust drift-free sequential mosaicking. Application to fetoscopy. Medical Imaging: Image-Guided Procedures 2018: 105760I - [i3]Loïc Peter, Marcel Tella-Amo, Dzhoshkun Ismail Shakir, George Attilakos, Ruwan Wimalasundera, Jan Deprest, Sébastien Ourselin, Tom Vercauteren:
Retrieval and Registration of Long-Range Overlapping Frames for Scalable Mosaicking of In Vivo Fetoscopy. CoRR abs/1802.10554 (2018) - [i2]Daniele Ravì, Agnieszka Barbara Szczotka, Dzhoshkun Ismail Shakir, Stephen P. Pereira, Tom Vercauteren:
Effective deep learning training for single-image super-resolution in endomicroscopy exploiting video-registration-based reconstruction. CoRR abs/1803.08840 (2018) - 2017
- [j3]Frederic Monge, Dzhoshkun I. Shakir, Florence Lejeune, Xavier Morandi
, Nassir Navab, Pierre Jannin
:
Acquisition models in intraoperative positron surface imaging. Int. J. Comput. Assist. Radiol. Surg. 12(4): 691-703 (2017) - [j2]Tom Doel
, Dzhoshkun I. Shakir, Rosalind Pratt, Michael Aertsen, James Moggridge, Erwin Bellon, Anna L. David
, Jan Deprest
, Tom Vercauteren
, Sébastien Ourselin
:
GIFT-Cloud: A data sharing and collaboration platform for medical imaging research. Comput. Methods Programs Biomed. 139: 181-190 (2017) - [j1]Sebastiano Ferraris, Dzhoshkun Ismail Shakir, Johannes L. van der Merwe
, Willy Gsell
, Jan Deprest
, Tom Vercauteren
:
Bruker2nifti: Magnetic Resonance Images converter from Bruker ParaVision to Nifti format. J. Open Source Softw. 2(16): 354 (2017) - [i1]Eli Gibson, Wenqi Li, Carole H. Sudre, Lucas Fidon, Dzhoshkun I. Shakir, Guotai Wang, Zach Eaton-Rosen, Robert J. Gray, Tom Doel, Yipeng Hu, Tom Whyntie, Parashkev Nachev, Dean C. Barratt, Sébastien Ourselin, M. Jorge Cardoso, Tom Vercauteren:
NiftyNet: a deep-learning platform for medical imaging. CoRR abs/1709.03485 (2017) - 2016
- [c8]Marcel Tella-Amo, Pankaj Daga, François Chadebecq, Stephen A. Thompson
, Dzhoshkun I. Shakir, George Dwyer, Ruwan Wimalasundera, Jan Deprest, Danail Stoyanov
, Tom Vercauteren
, Sébastien Ourselin
:
A Combined EM and Visual Tracking Probabilistic Model for Robust Mosaicking: Application to Fetoscopy. CVPR Workshops 2016: 524-532 - [c7]Pankaj Daga, François Chadebecq, Dzhoshkun I. Shakir, Luis Carlos García-Peraza-Herrera
, Marcel Tella, George Dwyer, Anna L. David
, Jan Deprest, Danail Stoyanov
, Tom Vercauteren
, Sébastien Ourselin
:
Real-time mosaicing of fetoscopic videos using SIFT. Medical Imaging: Image-Guided Procedures 2016: 97861R - [c6]Frédéric Monge, Dzhoshkun I. Shakir, Nassir Navab, Pierre Jannin
:
Partition-based acquisition model for speed up navigated beta-probe surface imaging. Medical Imaging: Image-Guided Procedures 2016: 97862P - 2014
- [b1]Dzhoshkun Ismail Shakir:
Intra-operative Nuclear Imaging Based on Positron-emitting Radiotracers (Intra-operative Nuklearmedizinische Bildgebung anhand Positronen-emittierender radioaktiver Tracer). Technical University of Munich, Germany, 2014 - 2013
- [c5]Asli Okur
, Dzhoshkun I. Shakir, Philipp Matthies, Alexander Hartl, Sibylle Ilse Ziegler, Markus Essler, Tobias Lasser
, Nassir Navab:
Freehand Tomographic Nuclear Imaging Using Tracked High-Energy Gamma Probes. Bildverarbeitung für die Medizin 2013: 362-367 - 2012
- [c4]Dzhoshkun I. Shakir, Asli Okur
, Alexander Hartl, Philipp Matthies, Sibylle Ilse Ziegler, Markus Essler, Tobias Lasser
, Nassir Navab:
Towards Intra-operative PET for Head and Neck Cancer: Lymph Node Localization Using High-Energy Probes. MICCAI (1) 2012: 430-437 - [c3]Alexander Hartl, Dzhoshkun I. Shakir, Risto Kojchev, Nassir Navab, Sibylle Ilse Ziegler, Tobias Lasser
:
Freehand SPECT reconstructions using look up tables. Medical Imaging: Image-Guided Procedures 2012: 83162H - [c2]Dzhoshkun I. Shakir, Alexander Hartl, Florian R. Schneider, Jozef Pulko, Sibylle Ilse Ziegler, Nassir Navab, Tobias Lasser
:
Two new ad-hoc models of detection physics and their evaluation for navigated beta probe surface imaging. Medical Imaging: Image-Guided Procedures 2012: 83162G - 2011
- [c1]Dzhoshkun I. Shakir, Alexander Hartl, Nassir Navab, Sibylle Ilse Ziegler:
Evaluation of an ad hoc model of detection physics for navigated beta-probe surface imaging. Medical Imaging: Image-Guided Procedures 2011: 796405
Coauthor Index
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