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Maria Deprez

Maria Murgasova – Maria Kuklisova-Murgasova

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affiliation: King's College London, UK

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2024
[j22]
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Jacqueline Matthew, Alena Uus, Leah De Souza, Robert Wright, Abi Fukami-Gartner, Gema Priego, Carlo Saija, Maria Deprez, Alexia Egloff Collado, Jana Hutter, Lisa Story, Christina Malamateniou, Kawal S. Rhode, Joseph V. Hajnal, Mary A. Rutherford:
Craniofacial phenotyping with fetal MRI: a feasibility study of 3D visualisation, segmentation, surface-rendered and physical models. BMC Medical Imaging 24(1): 52 (2024)
2023
[j21]
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  - journals/tmi/CorderoGrandeFHUDSHL23
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Lucilio Cordero-Grande, Juan Enrique Ortuño Fisac, Alejandra Aguado del Hoyo, Alena Uus, Maria Deprez, Andrés Santos, Joseph V. Hajnal, María J. Ledesma-Carbayo:
Fetal MRI by Robust Deep Generative Prior Reconstruction and Diffeomorphic Registration. IEEE Trans. Medical Imaging 42(3): 810-822 (2023)
2022
[j20]
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Alena Uus, Irina Grigorescu, Milou P. M. van Poppel, Johannes K. Steinweg, Thomas A. Roberts, Mary A. Rutherford, Joseph V. Hajnal, David F. A. Lloyd, Kuberan Pushparajah, Maria Deprez:
Automated 3D reconstruction of the fetal thorax in the standard atlas space from motion-corrupted MRI stacks for 21-36 weeks GA range. Medical Image Anal. 80: 102484 (2022)
[j19]
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  - journals/neuroimage/Taoudi-Benchekroun22
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Yassine Taoudi-Benchekroun, Daan Christiaens, Irina Grigorescu, Oliver Gale-Grant, Andreas Schuh, Maximilian Pietsch, Andrew Chew, Nicholas Harper, Shona Falconer, Tanya Poppe, Emer J. Hughes, Jana Hutter, Anthony N. Price, Jacques-Donald Tournier, Lucilio Cordero-Grande, Serena J. Counsell, Daniel Rueckert, Tomoki Arichi, Joseph V. Hajnal, A. David Edwards, Maria Deprez, Dafnis Batalle:
Predicting age and clinical risk from the neonatal connectome. NeuroImage 257: 119319 (2022)
2021
[j18]
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  - journals/neuroimage/ChristiaensCPHP21
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Daan Christiaens, Lucilio Cordero-Grande, Maximilian Pietsch, Jana Hutter, Anthony N. Price, Emer J. Hughes, Katy Vecchiato, Maria Deprez, A. David Edwards, Joseph V. Hajnal, Jacques-Donald Tournier:
Scattered slice SHARD reconstruction for motion correction in multi-shell diffusion MRI. NeuroImage 225: 117437 (2021)
2020
[j17]
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Maria Deprez, Anthony Price, Daan Christiaens, Georgia Lockwood Estrin, Lucilio Cordero-Grande, Jana Hutter, Alessandro Daducci, Jacques-Donald Tournier, Mary A. Rutherford, Serena J. Counsell, Meritxell Bach Cuadra, Joseph V. Hajnal:
Higher Order Spherical Harmonics Reconstruction of Fetal Diffusion MRI With Intensity Correction. IEEE Trans. Medical Imaging 39(4): 1104-1113 (2020)
[j16]
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Alena Uus, Tong Zhang, Laurence H. Jackson, Thomas A. Roberts, Mary A. Rutherford, Joseph V. Hajnal, Maria Deprez:
Deformable Slice-to-Volume Registration for Motion Correction of Fetal Body and Placenta MRI. IEEE Trans. Medical Imaging 39(9): 2750-2759 (2020)
2019
[j15]
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  - journals/neuroimage/BastianiACMHPMF19
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Matteo Bastiani, Jesper L. R. Andersson, Lucilio Cordero-Grande, Maria Murgasova, Jana Hutter, Anthony N. Price, Antonios Makropoulos, Sean P. Fitzgibbon, Emer J. Hughes, Daniel Rueckert, Suresh Victor, Mary A. Rutherford, A. David Edwards, Stephen M. Smith, Jacques-Donald Tournier, Joseph V. Hajnal, Saâd Jbabdi, Stamatios N. Sotiropoulos:
Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project. NeuroImage 185: 750-763 (2019)
[j14]
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Daan Christiaens, Lucilio Cordero-Grande, Jana Hutter, Anthony N. Price, Maria Deprez, Joseph V. Hajnal, Jacques-Donald Tournier:
Learning Compact ${q}$ -Space Representations for Multi-Shell Diffusion-Weighted MRI. IEEE Trans. Medical Imaging 38(3): 834-843 (2019)
2018
[j13]
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Jana Hutter, Daan Christiaens, Torben Schneider, Lucilio Cordero-Grande, Paddy Slator, Maria Deprez, Anthony N. Price, Jacques-Donald Tournier, Mary A. Rutherford, Joseph V. Hajnal:
Slice-level diffusion encoding for motion and distortion correction. Medical Image Anal. 48: 214-229 (2018)
[j12]
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Maria Kuklisova-Murgasova, Georgia Lockwood Estrin, Rita Gouveia Nunes, Shaihan J. Malik, Mary A. Rutherford, Daniel Rueckert, Joseph V. Hajnal:
Distortion Correction in Fetal EPI Using Non-Rigid Registration With a Laplacian Constraint. IEEE Trans. Medical Imaging 37(1): 12-19 (2018)
2017
[j11]
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  - journals/tmi/AlansaryRMMDLDR17
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Amir Alansary, Martin Rajchl, Steven G. McDonagh, Maria Murgasova, Mellisa Damodaram, David F. A. Lloyd, Alice Davidson, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert, Bernhard Kainz:
PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI. IEEE Trans. Medical Imaging 36(10): 2031-2044 (2017)
2015
[j10]
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Ivana Isgum, Manon J. N. L. Benders, Brian B. Avants, Manuel Jorge Cardoso, Serena J. Counsell, Elda Fischi Gomez, Laura Gui, Petra S. Hüppi, Karina J. Kersbergen, Antonios Makropoulos, Andrew Melbourne, Pim Moeskops, Christian P. Mol, Maria Kuklisova-Murgasova, Daniel Rueckert, Julia A. Schnabel, Vedran Srhoj-Egekher, Jue Wu, Siying Wang, Linda S. de Vries, Max A. Viergever:
Evaluation of automatic neonatal brain segmentation algorithms: The NeoBrainS12 challenge. Medical Image Anal. 20(1): 135-151 (2015)
[j9]
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Bernhard Kainz, Markus Steinberger, Wolfgang Wein, Maria Kuklisova-Murgasova, Christina Malamateniou, Kevin Keraudren, Thomas Torsney-Weir, Mary A. Rutherford, Paul Aljabar, Joseph V. Hajnal, Daniel Rueckert:
Fast Volume Reconstruction From Motion Corrupted Stacks of 2D Slices. IEEE Trans. Medical Imaging 34(9): 1901-1913 (2015)
2014
[j8]
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Sabrina Brigadoi, Paul Aljabar, Maria Kuklisova-Murgasova, Simon R. Arridge, Robert J. Cooper:
A 4D neonatal head model for diffuse optical imaging of pre-term to term infants. NeuroImage 100: 385-394 (2014)
[j7]
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Giulio Ferrazzi, Maria Kuklisova-Murgasova, Tomoki Arichi, Christina Malamateniou, Matthew J. Fox, Antonios Makropoulos, Joanna M. Allsop, Mary A. Rutherford, Shaihan J. Malik, Paul Aljabar, Joseph V. Hajnal:
Resting State fMRI in the moving fetus: A robust framework for motion, bias field and spin history correction. NeuroImage 101: 555-568 (2014)
[j6]
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Kevin Keraudren, Maria Kuklisova-Murgasova, Vanessa Kyriakopoulou, Christina Malamateniou, Mary A. Rutherford, Bernhard Kainz, Joseph V. Hajnal, Daniel Rueckert:
Automated fetal brain segmentation from 2D MRI slices for motion correction. NeuroImage 101: 633-643 (2014)
2013
[j5]
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  - journals/mia/Kuklisova-MurgasovaCNPQRHNS13
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Maria Kuklisova-Murgasova, Amalia Cifor, Raffaele Napolitano, Aris T. Papageorghiou, Gerardine Quaghebeur, Mary A. Rutherford, Joseph V. Hajnal, J. Alison Noble, Julia A. Schnabel:
Registration of 3D fetal neurosonography and MRI. Medical Image Anal. 17(8): 1137-1150 (2013)
2012
[j4]
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Maria Kuklisova-Murgasova, Gerardine Quaghebeur, Mary A. Rutherford, Joseph V. Hajnal, Julia A. Schnabel:
Reconstruction of fetal brain MRI with intensity matching and complete outlier removal. Medical Image Anal. 16(8): 1550-1564 (2012)
2011
[j3]
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Maria Kuklisova-Murgasova, Paul Aljabar, Latha Srinivasan, Serena J. Counsell, Valentina Doria, Ahmed Serag, Ioannis S. Gousias, James P. Boardman, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert:
A dynamic 4D probabilistic atlas of the developing brain. NeuroImage 54(4): 2750-2763 (2011)
[j2]
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Laurent Risser, François-Xavier Vialard, Robin Wolz, Maria Murgasova, Darryl D. Holm, Daniel Rueckert:
Simultaneous Multi-scale Registration Using Large Deformation Diffeomorphic Metric Mapping. IEEE Trans. Medical Imaging 30(10): 1746-1759 (2011)
2008
[j1]
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Paul Aljabar, Kanwal K. Bhatia, Maria Murgasova, Joseph V. Hajnal, James P. Boardman, Latha Srinivasan, Mary A. Rutherford, Leigh Dyet, A. David Edwards, Daniel Rueckert:
Assessment of brain growth in early childhood using deformation-based morphometry. NeuroImage 39(1): 348-358 (2008)

Conference and Workshop Papers

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2023
[c36]
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  - conf/miccai/SousaGUKZAOHTHRD23
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Helena S. Sousa, Abi Gartner, Alena Uus, Vanessa Kyriakopoulou, Brigita Ziukaite, Isa Anzak, Jonathan O'Muircheartaigh, Joseph V. Hajnal, Jacques-Donald Tournier, Alexander Hammers, Mary A. Rutherford, Maria Deprez:
A Deep Learning Approach for Segmenting the Subplate and Proliferative Zones in Fetal Brain MRI. PIPPI@MICCAI 2023: 17-27
[c35]
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Alena Uus, Megan Hall, Kelly Payette, Joseph V. Hajnal, Maria Deprez, Mary A. Rutherford, Jana Hutter, Lisa Story:
Combined Quantitative T2* Map and Structural T2-Weighted Tissue-Specific Analysis for Fetal Brain MRI: Pilot Automated Pipeline. PIPPI@MICCAI 2023: 28-38
[c34]
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  - conf/miccai/BhattacharyaPUSMCMLCTMD23
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Suryava Bhattacharya, Anthony Price, Alena Uus, Helena S. Sousa, Massimo Marenzana, Kathleen Colford, Peter Murkin, Maggie Lee, Lucilio Cordero-Grande, Rui Pedro A. G. Teixeira, Shaihan J. Malik, Maria Deprez:
Quantitative T2 Relaxometry in Fetal Brain: Validation Using Modified FaBiaN Fetal Brain MRI Simulator. PIPPI@MICCAI 2023: 39-49
[c33]
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  - conf/miccai/GillilandHUPGSLPVKLD23
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Paula Ramirez Gilliland, Uxio Hermida, Alena Uus, Milou P. M. van Poppel, Irina Grigorescu, Johannes K. Steinweg, David F. A. Lloyd, Kuberan Pushparajah, Adelaide de Vecchi, Andrew P. King, Pablo Lamata, Maria Deprez:
Towards Automatic Risk Prediction of Coarctation of the Aorta from Fetal CMR Using Atlas-Based Segmentation and Statistical Shape Modelling. PIPPI@MICCAI 2023: 53-63
[c32]
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Lindsay Munroe, Maria Deprez, Christos Michaelides, Harold G. Parkes, Kalotina Geraki, Amy H. Herlihy, Po-Wah So:
Synthesising Brain Iron Maps from Quantitative Magnetic Resonance Images Using Interpretable Generative Adversarial Networks. MTSAIL/LEAF/AI4Treat/MMMI/REMIA@MICCAI 2023: 214-226
[c31]
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Kelly Payette, Alena Uus, Jordina Aviles Verdera, Carla Avena Zampieri, Megan Hall, Lisa Story, Maria Deprez, Mary A. Rutherford, Joseph V. Hajnal, Sébastien Ourselin, Raphaël Tomi-Tricot, Jana Hutter:
An Automated Pipeline for Quantitative T2* Fetal Body MRI and Segmentation at Low Field. MICCAI (7) 2023: 358-367
2022
[c30]
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  - conf/miccai/GrigorescuUCCHB22
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Irina Grigorescu, Alena Uus, Daan Christiaens, Lucilio Cordero-Grande, Jana Hutter, Dafnis Batalle, A. David Edwards, Joseph V. Hajnal, Marc Modat, Maria Deprez:
Attention-Driven Multi-channel Deformable Registration of Structural and Microstructural Neonatal Data. PIPPI@MICCAI 2022: 71-81
[c29]
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Paula Ramirez Gilliland, Alena Uus, Milou P. M. van Poppel, Irina Grigorescu, Johannes K. Steinweg, David F. A. Lloyd, Kuberan Pushparajah, Andrew P. King, Maria Deprez:
Automated Multi-class Fetal Cardiac Vessel Segmentation in Aortic Arch Anomalies Using T2-Weighted 3D Fetal MRI. PIPPI@MICCAI 2022: 82-93
[c28]
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Alena Uus, Mohammad-Usamah Ayub, Abi Gartner, Vanessa Kyriakopoulou, Maximilian Pietsch, Irina Grigorescu, Daan Christiaens, Jana Hutter, Lucilio Cordero-Grande, Anthony Price, Dafnis Batalle, Serena J. Counsell, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Maria Deprez:
Segmentation of Periventricular White Matter in Neonatal Brain MRI: Analysis of Brain Maturation in Term and Preterm Cohorts. PIPPI@MICCAI 2022: 94-104
2021
[c27]
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Irina Grigorescu, Alena Uus, Daan Christiaens, Lucilio Cordero-Grande, Jana Hutter, Dafnis Batalle, A. David Edwards, Joseph V. Hajnal, Marc Modat, Maria Deprez:
Uncertainty-Aware Deep Learning Based Deformable Registration. UNSURE/PIPPI@MICCAI 2021: 54-63
[c26]
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Alena Uus, Jacqueline Matthew, Irina Grigorescu, Samuel Jupp, Lucilio Cordero-Grande, Anthony Price, Emer J. Hughes, Prachi A. Patkee, Vanessa Kyriakopoulou, Robert Wright, Thomas A. Roberts, Jana Hutter, Maximilian Pietsch, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Maria Deprez:
Spatio-Temporal Atlas of Normal Fetal Craniofacial Feature Development and CNN-Based Ocular Biometry for Motion-Corrected Fetal MRI. UNSURE/PIPPI@MICCAI 2021: 168-178
2020
[c25]
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Alena Uus, Johannes K. Steinweg, Alison Ho, Laurence H. Jackson, Joseph V. Hajnal, Mary A. Rutherford, Maria Deprez, Jana Hutter:
Deformable Slice-to-Volume Registration for Reconstruction of Quantitative T2* Placental and Fetal MRI. ASMUS/PIPPI@MICCAI 2020: 222-232
[c24]
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Irina Grigorescu, Lucilio Cordero-Grande, Dafnis Batalle, A. David Edwards, Joseph V. Hajnal, Marc Modat, Maria Deprez:
Harmonised Segmentation of Neonatal Brain MRI: A Domain Adaptation Approach. ASMUS/PIPPI@MICCAI 2020: 253-263
[c23]
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Alena Uus, Maximilian Pietsch, Irina Grigorescu, Daan Christiaens, Jacques-Donald Tournier, Lucilio Cordero-Grande, Jana Hutter, A. David Edwards, Joseph V. Hajnal, Maria Deprez:
Multi-channel Registration for Diffusion MRI: Longitudinal Analysis for the Neonatal Brain. WBIR 2020: 111-121
[c22]
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Irina Grigorescu, Alena Uus, Daan Christiaens, Lucilio Cordero-Grande, Jana Hutter, A. David Edwards, Joseph V. Hajnal, Marc Modat, Maria Deprez:
Diffusion Tensor Driven Image Registration: A Deep Learning Approach. WBIR 2020: 131-140
2019
[c21]
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Tong Zhang, Laurence H. Jackson, Alena Uus, James R. Clough, Lisa Story, Mary A. Rutherford, Joseph V. Hajnal, Maria Deprez:
Self-supervised Recurrent Neural Network for 4D Abdominal and In-utero MR Imaging. MLMIR@MICCAI 2019: 16-24
[c20]
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Irina Grigorescu, Lucilio Cordero-Grande, A. David Edwards, Joseph V. Hajnal, Marc Modat, Maria Deprez:
Investigating Image Registration Impact on Preterm Birth Classification: An Interpretable Deep Learning Approach. SUSI/PIPPI@MICCAI 2019: 104-112
2017
[c19]
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Jana Hutter, Daan Christiaens, Maria Deprez, Lucilio Cordero-Grande, Paddy Slator, Anthony Price, Mary A. Rutherford, Joseph V. Hajnal:
Dynamic Field Mapping and Motion Correction Using Interleaved Double Spin-Echo Diffusion MRI. MICCAI (1) 2017: 523-531
2016
[c18]
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Siying Wang, Maria Kuklisova-Murgasova, Joseph V. Hajnal, Christian Ledig, Julia A. Schnabel:
Regression analysis for assessment of myelination status in preterm brains with magnetic resonance imaging. ISBI 2016: 278-281
[c17]
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Maria Murgasova, Georgia Lockwood Estrin, Mary A. Rutherford, Daniel Rueckert, Joseph V. Hajnal:
Distortion correction in fetal EPI using non-rigid registration with Laplacian constraint. ISBI 2016: 1372-1375
[c16]
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Bernhard Kainz, David F. A. Lloyd, Amir Alansary, Maria Kuklisova-Murgasova, Rostislav Khlebnikov, Daniel Rueckert, Mary A. Rutherford, Reza Razavi, Joseph V. Hajnal:
High-Performance Motion Correction of Fetal MRI. EuroRV³@EuroVis 2016: 5-7
2015
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Bernhard Kainz, Christina Malamateniou, Giulio Ferrazzi, Maria Murgasova, Jan Egger, Kevin Keraudren, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert:
Adaptive scan strategies for fetal MRI imaging using slice to volume techniques. ISBI 2015: 849-852
2014
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Andreas Schuh, Maria Murgasova, Antonios Makropoulos, Christian Ledig, Serena J. Counsell, Joseph V. Hajnal, Paul Aljabar, Daniel Rueckert:
Construction of a 4D Brain Atlas and Growth Model Using Diffeomorphic Registration. STIA 2014: 27-37
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Bernhard Kainz, Christina Malamateniou, Maria Murgasova, Kevin Keraudren, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert:
Motion Corrected 3D Reconstruction of the Fetal Thorax from Prenatal MRI. MICCAI (2) 2014: 284-291
2012
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Maria Kuklisova-Murgasova, Gerardine Quaghebeur, Joseph V. Hajnal, J. Alison Noble, Julia A. Schnabel:
Towards 3D registration of fetal brain MRI and ultrasound. ISBI 2012: 346-349
[c11]
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Maria Kuklisova-Murgasova, Amalia Cifor, Raffaele Napolitano, Aris T. Papageorghiou, Gerardine Quaghebeur, J. Alison Noble, Julia A. Schnabel:
Registration of 3D Fetal Brain US and MRI. MICCAI (2) 2012: 667-674
2011
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Ziyue Wu, Maria Murgasova, Andreas Buchmann, Michael von Rhein, Julia A. Schnabel:
Brain Extraction Methods for Neonates. MIUA 2011: 111-116
2010
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Maria Murgasova, Latha Srinivasan, Ioannis S. Gousias, Paul Aljabar, Joseph V. Hajnal, A. David Edwards, Daniel Rueckert:
Construction of a dynamic 4D probabilistic atlas for the developing brain. ISBI 2010: 952-955
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Wenzhe Shi, Maria Murgasova, Philip J. Edwards, Daniel Rueckert:
Simultaneous Reconstruction of 4-D Myocardial Motion from Both Tagged and Untagged MR Images Using Nonrigid Image Registration. MIAR 2010: 98-107
[c7]
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Paul Aljabar, Robin Wolz, Latha Srinivasan, Serena J. Counsell, James P. Boardman, Maria Murgasova, Valentina Doria, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal:
Combining Morphological Information in a Manifold Learning Framework: Application to Neonatal MRI. MICCAI (3) 2010: 1-8
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  - conf/wbir/RisserVMHR10
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Laurent Risser, François-Xavier Vialard, Maria Murgasova, Darryl D. Holm, Daniel Rueckert:
Large Deformation Diffeomorphic Registration Using Fine and Coarse Strategies. WBIR 2010: 186-197
2009
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Maria Murgasova, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert:
Robust Segmentation of Brain Structures in MRI. ISBI 2009: 17-20
2007
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Kanwal K. Bhatia, Paul Aljabar, James P. Boardman, Latha Srinivasan, Maria Murgasova, Serena J. Counsell, Mary A. Rutherford, Joseph V. Hajnal, A. David Edwards, Daniel Rueckert:
Groupwise Combined Segmentation and Registration for Atlas Construction. MICCAI (1) 2007: 532-540
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Paul Aljabar, Kanwal K. Bhatia, Maria Murgasova, Joseph V. Hajnal, James P. Boardman, Latha Srinivasan, Mary A. Rutherford, Leigh Dyet, A. David Edwards, Daniel Rueckert:
Quantifying brain development in early childhood using segmentation and registration. Medical Imaging: Image Processing 2007: 65120O
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Maria Murgasova, Leigh Dyet, Joseph V. Hajnal, Mary A. Rutherford, A. David Edwards, Daniel Rueckert:
Robust segmentation of brain MRI using combination of registration and EM-based methods. SCCG 2007: 107-114
2006
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Maria Murgasova, Leigh Dyet, A. David Edwards, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert:
Segmentation of Brain MRI in Young Children. MICCAI (1) 2006: 687-694

Informal and Other Publications

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2023
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Paula Ramirez Gilliland, Alena Uus, Milou P. M. van Poppel, Irina Grigorescu, Johannes K. Steinweg, David F. A. Lloyd, Kuberan Pushparajah, Andrew P. King, Maria Deprez:
Multi-task learning for joint weakly-supervised segmentation and aortic arch anomaly classification in fetal cardiac MRI. CoRR abs/2311.07234 (2023)
2021
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Lucilio Cordero-Grande, Juan Enrique Ortuño Fisac, Alena Uus, Maria Deprez, Andrés Santos, Joseph V. Hajnal, María-Jesus Ledesma-Carbayo:
Fetal MRI by robust deep generative prior reconstruction and diffeomorphic registration: application to gestational age prediction. CoRR abs/2111.00102 (2021)
2019
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  - journals/corr/abs-1908-10842
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Tong Zhang, Laurence H. Jackson, Alena Uus, James R. Clough, Lisa Story, Mary A. Rutherford, Joseph V. Hajnal, Maria Deprez:
Self-supervised Recurrent Neural Network for 4D Abdominal and In-utero MR Imaging. CoRR abs/1908.10842 (2019)
2016
[i1]
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Amir Alansary, Bernhard Kainz, Martin Rajchl, Maria Murgasova, Mellisa Damodaram, David F. A. Lloyd, Alice Davidson, Steven G. McDonagh, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert:
PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI. CoRR abs/1611.07289 (2016)

Coauthor Index

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