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ORCID13th ISBI 2016: Prague, Czech Republic
- 13th IEEE International Symposium on Biomedical Imaging, ISBI 2016, Prague, Czech Republic, April 13-16, 2016. IEEE 2016, ISBN 978-1-4799-2349-6
Brain CAD (Poster Session)
- Ahmad Chaddad
, Christian Desrosiers, Matthew Toews:
Local discriminative characterization of MRI for Alzheimer's disease. 1-5 - Marwa Ismail, Ahmed Soliman, Ahmed ElTanboly, Andrew E. Switala, Mona Mahmoud, Fahmi Khalifa, Georgy L. Gimel'farb, Manuel F. Casanova, Robert Keynton, Ayman El-Baz:
Detection of white matter abnormalities in MR brain images for diagnosis of autism in children. 6-9 - Juan Eloy Arco, Javier Ramírez, Carlos García Puntonet, Juan Manuel Górriz, María Ruz:
Improving short-term prediction from MCI to AD by applying searchlight analysis. 10-13 - Wen Zhang, Jie Shi, Cynthia M. Stonnington, Robert J. Bauer, Boris A. Gutman, Kewei Chen, Paul M. Thompson, Eric M. Reiman, Richard J. Caselli, Yalin Wang:
Morphometric analysis of hippocampus and lateral ventricle reveals regional difference between cognitively stable and declining persons. 14-18 - Kevin Hobbs, Pin Zhang, Bibo Shi, Charles D. Smith, Jundong Liu:
Quad-mesh based radial distance biomarkers for Alzheimer's disease. 19-23 - Ricardo Mendoza-Leon, Fabio A. González, Pablo Arbeláez, John Puentes, Marcela Hernández Hoyos:
Analysis of PHOW representations for Alzheimer disease classification on brain structural MRI. 24-27 - Lisa Y. W. Tang, Roger C. Tam, Ghassan Hamarneh:
Enhancing accuracy of symmetric random walker image registration via a novel data-consistency measure. 28-31
Cardiac Imaging (Poster Session)
- Esther Puyol-Antón, Devis Peressutti, Paul Aljabar, Mathieu De Craene, Paolo Piro, Andrew P. King:
Towards a multimodal cardiac motion atlas. 32-35 - Chao Song, Yongyi Yang, Miles N. Wernick, P. Hendrik Pretorius, Michael A. King:
Optimizing motion correction in reconstruction of respiratory-gated spect. 36-39 - Majd Zreik, Tim Leiner, Bob D. de Vos, Robbert W. van Hamersvelt, Max A. Viergever, Ivana Isgum:
Automatic segmentation of the left ventricle in cardiac CT angiography using convolutional neural networks. 40-43 - Oliver Moolan-Feroze, Majid Mirmehdi, Mark C. K. Hamilton:
Right ventricle segmentation using a 3D cylindrical shape model. 44-48 - Vera Damerjian, Olena Tankyevych, Aziz Guellich, Thibaud Damy, Eric Petit:
Ultrasound image texture characterization with Gabor wavelets for cardiac hypertrophy differentiation. 49-52 - Germán González, George R. Washko, Raúl San José Estépar:
Automated Agatston score computation in a large dataset of non ECG-gated chest computed tomography. 53-57
fMRI Analysis (Poster Session)
- Jinglei Lv, Armin Iraji, Hanbo Chen, Fangfei Ge, Lei Guo, Xin Zhang, Zhifeng Kou, Tianming Liu:
Group-wise sparse representation of brain states reveal network abnormalities in mild traumatic brain injury. 58-61 - Cheng Lyu, Xiang Li, Jinglei Lv, Xintao Hu, Junwei Han, Lei Quo, Tianming Liu:
Identifying group-wise consistent sub-networks via spatial sparse representation of natural stimulus FMRI data. 62-65 - Xiang Li, Binbin Lin, Jinglei Lv, Jieping Ye, Tianming Liu:
Modeling functional network dynamics via multi-scale dictionary learning and network continuums. 66-69 - Xiang Li, Qinglin Dong, Xi Jiang, Jinglei Lv, Tianming Liu:
Multple-demand system identification and characterization via sparse representations of fMRI data. 70-73 - Mohanad Albughdadi, Lotfi Chaâri, Florence Forbes, Jean-Yves Tourneret, Philippe Ciuciu:
Multi-subject joint parcellation detection estimation in functional MRI. 74-77 - Fei Zhao, Hong Man, Cristina Comaniciu:
Robust multiple external stimuli classification in functional MRI images. 78-81
Image Reconstruction (Poster Session)
- Mink Phuong Nguyen, Se Young Chun:
Center pixel weight estimation for non-local means filtering using local James-Stein estimator with bounded self-weights. 82-85 - Se Young Chun, Kyeong Yun Kim, Jae Sung Lee, Jeffrey A. Fessler:
Joint estimation of activity distribution and attenuation map for TOF-PET using alternating direction method of multiplier. 86-89 - Maxime Toussaint, Jean-Pierre Dussault, Roger Lecomte:
Revisiting motion compensation models in PET image reconstruction. 90-94 - Raghav Mehta, Jayanthi Sivaswamy:
A hybrid approach to tissue-based intensity standardization of brain MRI images. 95-98 - Petru Manescu, Hamid Ladjal, Yazid Touileb, Joseph Azencot, Michael Beuve, Behzad Shariat:
4D positron emission tomography image reconstruction based on biomechanical respiratory motion. 99-102
Interventional Imaging (Poster Session)
- Bor-Jeng Chen, Ziyan Wu, Shanhui Sun, Dong Zhang, Terrence Chen:
Guidewire tracking using a novel sequential segment optimization method in interventional X-ray videos. 103-106 - Mohamed Alsheakhali, Abouzar Eslami, Nassir Navab:
Detection of articulated instruments in retinal microsurgery. 107-110 - Niels Verheyen, David Robben, Daniel Ruijters, Vitor Mendes Pereira, Olivier Brina, Frederik Maes, Paul Suetens:
Inferring brain deformation during open neurosurgery using CBCT angiography. 111-114 - Nazim Haouchine, Stephane Cotin:
Segmentation and labelling of intra-operative laparoscopic images using structure from point cloud. 115-118 - Norbertus Christianus van Dongen, Fons van der Sommen, Svitlana Zinger, Erik J. Schoon, Peter H. N. de With:
Automatic assessment of informative frames in endoscopic video. 119-122
Microscopy Imaging and Reconstruction (Poster Session)
- Buda Bajic, Joakim Lindblad, Natasa Sladoje:
Blind restoration of images degraded with mixed poisson-Gaussian noise with application in transmission electron microscopy. 123-127 - Suman Kr. Maji, Catherine Dargemont, Jean Salamero, Jérôme Boulanger:
Joint denoising-deconvolution approach for fluorescence microscopy. 128-131 - Michael Bromberger, Pascal Bastian, Jan-Philip Bergeest, Christian Conrad, Vincent Heuveline, Karl Rohr, Wolfgang Karl:
FPGA-accelerated Richardson-Lucy deconvolution for 3D image data. 132-135 - Lola Bautista, Simone Rebegoldi, Laure Blanc-Féraud, Marco Prato, Luca Zanni, Arturo Plata:
Phase estimation in differential-interference-contrast (DIC) microscopy. 136-139 - Alejandro Sune-Aunon, Álvaro Jorge-Peñas, Hans Van Oosterwyck, Arrate Muñoz-Barrutia:
L1-regularized reconstruction for traction force microscopy. 140-144 - Biel Roig-Solvas, Jaydeep P. Bardhan, Deniz Erdogmus, Dana H. Brooks, Lee Makowski:
A framework to optimize protein structure from solution scattering using ADMM and an elastic subdomain network. 145-149
Musculo-Skeletal Imaging (Poster Session)
- Darko Stern, Martin Urschler:
From individual hand bone age estimates to fully automated age estimation via learning-based information fusion. 150-154 - Maria Wimmer, David Major, Alexey A. Novikov, Katja Bühler:
Local entropy-optimized texture models for semi-automatic spine labeling in various MRI protocols. 155-159 - Erkang Cheng, Yixun Liu, Henky Wibowo, Lav Rai:
Learning-based spine vertebra localization and segmentation in 3D CT image. 160-163 - Jirí Hladuvka, Asura Enkhbayar, Benjamin Norman, Richard Ljuhar:
Automated ROI placement and trabecula-driven orientation for radiographic texture analyses of calcaneus. 164-167 - Duc Fehr, Charles Ross Schmidtlein, Sinchun Hwang, Joseph O. Deasy, Harini Veeraraghavan:
Automatic detection and tracking of longitudinal changes of multiple bone metastases from dual energy CT. 168-171 - Catarina B. Carvalho, Steven Bogaerts, Lennart Scheys, Jan D'hooge, Koen Peers, Paul Suetens:
3D tendon strain estimation on high-frequency 3D ultrasound images a simulation and phantom study. 172-175 - William Kovacs, Chia-Ying Liu, Ronald M. Summers, Jianhua Yao:
Identification of muscle and subcutaneous and intermuscular adipose tissue on thigh MRI of muscular dystrophy. 176-179 - Shahin Ebrahimi, Elsa D. Angelini, Laurent Gajny, Wafa Skalli:
Lumbar spine posterior corner detection in X-rays using Haar-based features. 180-183 - Philippe Burlina, David E. Freund, Neil Joshi, Y. Wolfson, Neil M. Bressler:
Detection of age-related macular degeneration via deep learning. 184-188
Retinal Imaging - Poster (Poster Session)
- Samaneh Abbasi-Sureshjani, Iris Smit-Ockeloen, Erik J. Bekkers, Behdad Dashtbozorg, Bart M. ter Haar Romeny:
Automatic detection of vascular bifurcations and crossings in retinal images using orientation scores. 189-192 - Karthik Gopinath, Jayanthi Sivaswamy, Tarannum Mansoori:
Automatic glaucoma assessment from angio-OCT images. 193-196 - Andrew Lang, Aaron Carass, Bruno M. Jedynak, Sharon D. Solomon, Peter A. Calabresi, Jerry L. Prince:
Intensity inhomogeneity correction of macular OCT using N3 and retinal flatspace. 197-200
Segmentation Methods for Microscopy Images (Poster Session)
- Hady Ahmady Phoulady, Dmitry B. Goldgof, Lawrence O. Hall, Peter R. Mouton:
A new approach to detect and segment overlapping cells in multi-layer cervical cell volume images. 201-204 - Petter Ranefall, Sajith Kecheril Sadanandan, Carolina Wählby:
Fast adaptive local thresholding based on ellipse fit. 205-208 - Noha El-Zehiry, Oliver Hayden, Ali Kamen:
Cell segmentation in digital holographic images. 209-212 - Yousef Al-Kofahi, Christopher Sevinsky, Alberto Santamaría-Pang, Fiona Ginty, Anup Sood, Qing Li:
Multi-channel algorithm for segmentation of tumor blood vessels using multiplexed image data. 213-216 - Casper Bo Jensen, Mark Lyksborg, Jacob Hecksher-Sørensen, Anna Secher, Knut Conradsen, Anders B. Dahl:
Active appearance segmentation for intensity inhomogeneity in light sheet fluorescence microscopy. 217-220
Modeling and Simulation - Oral (Oral Session)
- Ilwoo Lyu, Sun Hyung Kim, Martin Andreas Styner:
Cortical surface shape assessment via sulcal/gyral curve-based gyrification index. 221-224 - Robert Korez, Benjamin Aubert, Thierry Cresson, Stefan Parent, Tomaz Vrtovec, Jacques A. de Guise, Samuel Kadoury:
Sparse and multi-object pose+shape modeling of the three-dimensional scoliotic spine. 225-228 - Seyhmus Guler, Moritz Dannhauer, Burak Erem, Robert S. MacLeod, Don M. Tucker, Sergei Turovets, Phan Luu, Waleed Meleis, Dana H. Brooks:
Optimizing stimulus patterns for dense array TDCS with fewer sources than electrodes using a branch and bound algorithm. 229-232 - Axelle Pillain, Lyes Rahmouni, Francesco Paolo Andriulli:
On the handling of brain tissue anisotropy in the forward EEG problem with a conformingly discretized surface integral method. 233-236 - Matteo Mancini, Marcel A. de Reus, Laura Serra, Marco Bozzali, Martijn P. van den Heuvel, Mara Cercignani, Silvia Conforto:
Network attack simulations in Alzheimer's disease: The link between network tolerance and neurodegeneration. 237-240
Microscopy Image Reconstruction (Oral Session)
- Jiaqing Huang, Mingzhai Sun, Yuejie Chi:
Super-resolution image reconstruction for high-density 3D single-molecule microscopy. 241-244 - Patrick Steffen Pedersen, Jan Østergaard, Torben Larsen:
Modelling reconstruction quality of Lissajous undersampled atomic force microscopy images. 245-248 - Denis Fortun, Paul Guichard, Ning Chu, Michael Unser:
Isotropic resolution in fluorescence imaging by single particle reconstruction. 249-252 - Kevin G. Chan, Michael Liebling:
A point-spread-function-aware filtered backprojection algorithm for focal-plane-scanning optical projection tomography. 253-256 - Bertha Mayela Toledo Acosta, Patrick Bouthemy, Charles Kervrann:
A common image representation and a patch-based search for correlative light-electron-microscopy (CLEM) registration. 257-260
Brain Segmentation (Oral Session)
- Jessica Dubois, David Germanaud, Hugo Angleys, François Leroy, Clara Fischer, Jessica Lebenberg, François Lazeyras, Ghislaine Dehaene-Lambertz, Lucie Hertz-Pannier, Jean-François Mangin, Petra S. Hüppi, Julien Lefèvre:
Exploring the successive waves of cortical folding in the developing brain using MRI and spectral analysis of gyrification. 261-264 - Tom Haeck, Frederik Maes, Paul Suetens:
An untrained and unsupervised method for MRI brain tumor segmentation. 265-268 - Mahsa Shakeri, Stavros Tsogkas, Enzo Ferrante, Sarah Lippé, Samuel Kadoury, Nikos Paragios, Iasonas Kokkinos:
Sub-cortical brain structure segmentation using F-CNN'S. 269-272 - Veronika Cheplygina, Annegreet van Opbroek, Mohammad Arfan Ikram, Meike W. Vernooij, Marleen de Bruijne:
Asymmetric similarity-weighted ensembles for image segmentation. 273-277 - Siying Wang, Maria Kuklisova-Murgasova, Joseph V. Hajnal, Christian Ledig, Julia A. Schnabel:
Regression analysis for assessment of myelination status in preterm brains with magnetic resonance imaging. 278-281
Motion Tracking (Poster Session)
- Christopher Gilliam, Thomas Kustner, Thierry Blu:
3D motion flow estimation using local all-pass filters. 282-285 - Christine Tanner, Minglei Yang, Golnoosh Samei, Gábor Székely:
Influence of inter-subject correspondences on liver motion predictions from population models. 286-289 - Yang Liu, Hua Zhang, Jianhua Ma, Zhaoying Bian, Qianjin Feng, Wufan Chen:
Four dimensional cone-beam computed tomography reconstruction using motion tracking induced regional spatiotemporal sparsity. 290-293 - Yixun Liu, Erkang Cheng, Henky Wibowo, Lav Rai:
A GPU-based method in recovering the full 3D deformation field using multiple 2D fluoroscopic views in lung navigation. 294-297 - Orcun Goksel, Valery Vishnevsky, Alvaro Gomariz Carrillo, Christine Tanner:
Imaging of sliding visceral interfaces during breathing. 298-301
MR Acquisition - Poster (Poster Session)
- Arun Kumar, Lin Feng, Jagath C. Rajapakse:
Mixed spectrum analysis in spatial context: Application to fMRI. 302-305 - Cagdas Ulas, Pedro A. Gómez, Jonathan I. Sperl, Christine Preibisch, Bjoern H. Menze:
Spatio-temporal MRI reconstruction by enforcing local and global regularity via dynamic total variation and nuclear norm minimization. 306-309 - Eric Van Reeth, Helene Rafiney, Michael Tesch, Steffen J. Glaser, Dominique Sugny:
Optimizing MRI contrast with B1 pulses using optimal control theory. 310-313 - Eun Ju Cha, Kyong Hwan Jin, Dongwook Lee, Eung-Yeop Kim, Seung Hong Choi, Jong Chul Ye:
Improved temporal resolution of twist imaging using annihilating filter-based low rank Hankel matrix approach. 314-317 - Zhongxing Peng, Zheng Xu, Junzhou Huang:
RSPIRIT: Robust self-consistent parallel imaging reconstruction based on generalized Lasso. 318-321
Neuron Image Analysis (Poster Session)
- Ludovica Acciai, Irene Costantini, Francesco Saverio Pavone, Valerio Conti, Renzo Guerrini, Paolo Soda, Giulio Iannello:
Towards automated neuron tracing via global and local 3D image analysis. 322-325 - Julia M. Buhmann, Stephan Gerhard, Matthew Cook, Jan Funke:
Tracking of microtubules in anisotropic volumes of neural tissue. 326-329 - Gadea Mata, Miroslav Radojevic, Ihor Smal, Miguel Morales, Erik Meijering, Julio Rubio:
Automatic detection of neurons in high-content microscope images using machine learning approaches. 330-333 - Sepehr Farhand, Sarun Gulyanon, Nima Sharifai, Michael D. Kim, Akira Chiba, Gavriil Tsechpenakis:
Temporal neurite registration using hierarchical alignments. 334-338 - Muhammad Usman Ghani, Ali Ozgur Argunsah, Inbal Israely, Devrim Ünay, Tolga Tasdizen, Müjdat Çetin:
On comparison of manifold learning techniques for dendritic spine classification. 339-342 - Ertunc Erdil, Lavdie Rada, Ali Ozgur Argunsah, Inbal Israely, Devrim Ünay, Tolga Tasdizen, Müjdat Çetin:
Nonparametric joint shape and feature priors for segmentation of dendritic spines. 343-346 - Muhammad Usman Ghani, Fitsum Mesadi, Sumeyra Demir Kanik, Ali Ozgur Argunsah, Inbal Israely, Devrim Ünay, Tolga Tasdizen, Müjdat Çetin:
Dendritic spine shape analysis using disjunctive normal shape models. 347-350 - Yinxue Wang, Guilai Shi, David J. Miller, Yizhi Wang, Gerard Broussard, Yue Wang, Lin Tian, Guoqiang Yu:
FASP: A machine learning approach to functional astrocyte phenotyping from time-lapse calcium imaging data. 351-354
Optical Imaging - Poster (Poster Session)
- Michael Gadermayr, Sebastian Hegenbart, Roland Kwitt, Andreas Uhl, Andreas Vécsei:
Narrow band imaging versus white-light: What is best for computer-assisted diagnosis of celiac disease? 355-359 - Henryk Blasinski, Jeff Caves, Joyce E. Farrell, Brian A. Wandell, Paul Wang:
Multispectral imaging of tissue ablation. 360-363 - Sergey Demyanov, Rajib Chakravorty, Mani Abedini, Alan Halpern, Rahil Garnavi:
Classification of dermoscopy patterns using deep convolutional neural networks. 364-368 - Samuel Ortega, Gustavo Marrero Callicó, Maria De La Luz Plaza, Rafael Camacho, Himar Fabelo, Roberto Sarmiento:
Hyperspectral database of pathological in-vitro human brain samples to detect carcinogenic tissues. 369-372 - William Meiniel, Yu Gan, Christine P. Hendon, Jean-Christophe Olivo-Marin, Andrew F. Laine, Elsa D. Angelini:
Sparsity-based simplification of spectral-domain optical coherence tomography images of cardiac samples. 373-376 - Bibiana Cuervo-Soto, Javier Herrera-Vega, José Alfonso del Carmen Garcés-Báez, Carlos G. Treviño-Palacios, Felipe Orihuela-Espina:
MOCARTS: A lightweight radiation transport simulator for easy handling of complex sensing geometries. 377-380
Segmentation and Quantification of Biological Images (Poster Session)
- Shekoufeh Gorgi Zadeh, Max Hermann, Elisa Merklingen, Jan-Gero Schloetel, Thomas Schultz:
Quantifying image structures in high-throughput microscopy with total variation flow. 381-385 - Amit Suveer, Natasa Sladoje, Joakim Lindblad, Anca Dragomir, Ida-Maria Sintorn:
Automated detection of cilia in low magnification transmission electron microscopy images using template matching. 386-390 - Kaisa Liimatainen, Pekka Ruusuvuori, Leena Latonen, Heikki Huttunen:
Supervised method for cell counting from bright field focus stacks. 391-394 - Virginie Uhlmann, Ricard Delgado-Gonzalo, Michael Unser, Patrik Olavi Michel, Lucia Baldi, Florian Maria Wurm:
USER-friendly image-based segmentation and analysis of chromosomes. 395-398 - Shiri Gordon, Irit Dolgopyat, Itamar Kahn, Tammy Riklin Raviv:
Co-segmentation of multiple images into multiple regions: Application to mouse brain MRI. 399-402
Segmentation I (Poster Session)
- Shuqing Chen, Yanye Lu, Christian Hopfgartner, Michael Sühling, Stefan Steidl, Joachim Hornegger, Andreas K. Maier:
3-D printing based production of head and neck masks for radiation therapy using CT volume data: A fully automatic framework. 403-406 - Hélène Urien, Irène Buvat, Nicolas Rougon, Sarah Boughdad, Isabelle Bloch:
3D PET-driven multi-phase segmentation of meningiomas in MRI. 407-410 - Pierre-Henri Conze, Vincent Noblet, François Rousseau, Fabrice Heitz, Riccardo Memeo, Patrick Pessaux:
Random forests on hierarchical multi-scale supervoxels for liver tumor segmentation in dynamic contrast-enhanced CT scans. 416-419 - Vishwa S. Parekh, Michael A. Jacobs:
A multidimensional data visualization and clustering method: Consensus similarity mapping. 420-423 - Anthony Paproki, Katharine J. Wilson, Rachel K. Surowiec, Charles P. Ho, Abinash Pant, Pierrick Bourgeat, Craig Engstrom, Stuart Crozier, Jurgen Fripp:
Automated segmentation and T2-mapping of the posterior cruciate ligament from MRI of the knee: Data from the osteoarthritis initiative. 424-427 - Esther Alberts, Markus Rempfler, Georgina Alber, Thomas Huber, Jan Kirschke, Claus Zimmer, Bjoern H. Menze:
Uncertainty quantification in brain tumor segmentation using CRFs and random perturbation models. 428-431 - Fahmi Khalifa, Ahmed Soliman, Ali E. Takieldeen, Mohamed Shehata, Mahmoud Mostapha, Ahmed Shaffie, Rosemary Ouseph, Adel Elmaghraby, Ayman El-Baz:
Kidney segmentation from CT images using a 3D NMF-guided active contour model. 432-435
Tissue Quantification (Poster Session)
- Muhammad Asad, Guang Yang, Gregory G. Slabaugh:
Supervised partial volume effect unmixing for brain tumor characterization using multi-voxel MR spectroscopic imaging. 436-439 - Marco Pizzolato, Timothé Boutelier, Rutger Fick, Rachid Deriche:
Elucidating dispersion effects in perfusion MRI by means of dispersion-compliant bases. 440-443 - El-Sayed Ibrahim, Scott Swanson, Jadranka Stojanovska, Claire Duvernoy, Rodica Pop-Busui:
Harmonic phase versus sine-wave modulation for measuring regional heart function from tagged MRI images. 444-447 - Jadranka Stojanovska, El-Sayed Ibrahim, Slavica Nikolovska, Thomas L. Chenevert:
Identifying cardiac magnetic resonance signatures of obesity phenotypes in metabolic syndrome using multi-echo DIXON imaging. 448-451 - Saurabh Jain, Diana Maria Sima, Faezeh Sanaei Nezhad, Steve Williams, Sabine Van Huffel, Frederik Maes, Dirk Smeets:
Patch based super-resolution of MR spectroscopic images. 452-456 - Yanye Lu