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ORCIDGuohua Wang 0001
Person information
- affiliation: Northeast Forestry University, Harbin, Helongjiang, China
Other persons with the same name
- Guohua Wang — disambiguation page
- Guohua Wang 0002
![[0000-0002-8844-4663]](https://dblp1.uni-trier.de/img/orcid-mark.12x12.png "0000-0002-8844-4663")
— Hertzwell Pte Ltd, Singapore - Guohua Wang 0003 — South China University of Technology, Guangzhou, China
- Guohua Wang 0004 — South China University of Technology, Guangzhou, China
- Guohua Wang 0005 — South China Agricultural University, Guangzhou, China
- Guohua Wang 0006 — Lanzhou Jiaotong University, Lanzhou, China
- Guohua Wang 0007 — Southwest Petroleum University, Chengdu, China
- Guohua Wang 0008 — PLA Army Artillery and Air Defense Academy, China
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2020 – today
- 2025
[j71]Jilong Bian, Hao Lu, Limin Wei, Yang Li, Guohua Wang:
Relational similarity-based graph contrastive learning for DTI prediction. Briefings Bioinform. 26(2) (2025)- [j70]Runtian Gao, Heng Hu, Zhongjun Jiang, Shuqi Cao, Guohua Wang, Yuming Zhao, Tao Jiang:
SVHunter: long-read-based structural variation detection through the transformer model. Briefings Bioinform. 26(3) (2025) - [j69]Zhixia Teng, Zhaowen Tian, Murong Zhou, Guohua Wang, Zhen Tian, Yuming Zhao:
Enhancing LncRNA-miRNA interaction prediction with multimodal contrastive representation learning. Briefings Bioinform. 26(3) (2025) - [j68]Zhixia Teng, Yongliang Li, Zhen Tian, Yingjian Liang, Guohua Wang:
Drug repositioning by collaborative learning based on graph convolutional inductive network. Future Gener. Comput. Syst. 162: 107491 (2025) - [j67]Yang Li, Zhengxin Wei, Chang Liu, Guohua Wang:
Fine-grained multimodal molecular pretraining via prompt learning. Knowl. Based Syst. 329: 114381 (2025) - [j66]Murong Zhou, Baifu Zuo, Guohua Wang, Gongning Luo, Fanding Li, Suyu Dong, Wei Wang, Kuanquan Wang, Xiangyu Li, Lifeng Xu:
Adjacency-Aware Fuzzy Label Learning for Skin Disease Diagnosis. IEEE Trans. Fuzzy Syst. 33(5): 1429-1440 (2025) - 2024
- [j65]Yan Miao, Zhenyuan Sun, Chenjing Ma, Chen Lin, Guohua Wang, Chunxue Yang:
VirGrapher: a graph-based viral identifier for long sequences from metagenomes. Briefings Bioinform. 25(2) (2024) - [j64]Tianjiao Zhang, Zhenao Wu, Liangyu Li, Jixiang Ren, Ziheng Zhang, Guohua Wang:
CPPLS-MLP: a method for constructing cell-cell communication networks and identifying related highly variable genes based on single-cell sequencing and spatial transcriptomics data. Briefings Bioinform. 25(3) (2024) - [j63]Jilong Bian, Hao Lu, Guanghui Dong, Guohua Wang:
Hierarchical multimodal self-attention-based graph neural network for DTI prediction. Briefings Bioinform. 25(4) (2024) - [j62]Heng Hu, Runtian Gao, Wentao Gao, Bo Gao, Zhongjun Jiang, Murong Zhou, Guohua Wang, Tao Jiang:
SVDF: enhancing structural variation detect from long-read sequencing via automatic filtering strategies. Briefings Bioinform. 25(4) (2024) - [j61]Qiang Yang, Long Xu, Weihe Dong, Xiaokun Li, Kuanquan Wang, Suyu Dong, Xianyu Zhang, Tiansong Yang, Feng Jiang, Bin Zhang, Gongning Luo, Xin Gao, Guohua Wang:
HLAIImaster: a deep learning method with adaptive domain knowledge predicts HLA II neoepitope immunogenic responses. Briefings Bioinform. 25(4) (2024) - [j60]Zhenze Liu, Yingjian Liang, Guohua Wang, Tianjiao Zhang:
scLEGA: an attention-based deep clustering method with a tendency for low expression of genes on single-cell RNA-seq data. Briefings Bioinform. 25(5) (2024) - [j59]Yan Miao, Zhenyuan Sun, Chen Lin, Haoran Gu, Chenjing Ma, Yingjian Liang, Guohua Wang:
DeePhafier: a phage lifestyle classifier using a multilayer self-attention neural network combining protein information. Briefings Bioinform. 25(5) (2024) - [j58]Chonghui Liu, Yan Zhang, Yingjian Liang, Tianjiao Zhang, Guohua Wang:
DrugReSC: targeting disease-critical cell subpopulations with single-cell transcriptomic data for drug repurposing in cancer. Briefings Bioinform. 25(6) (2024) - [j57]Xueying Xie, Lin Gui, Baixue Qiao, Guohua Wang, Shan Huang, Yuming Zhao, Shanwen Sun:
Deep learning in template-free de novo biosynthetic pathway design of natural products. Briefings Bioinform. 25(6) (2024) - [j56]Tianjiao Zhang, Ziheng Zhang, Liangyu Li, Benzhi Dong, Guohua Wang, Dandan Zhang:
GTAD: a graph-based approach for cell spatial composition inference from integrated scRNA-seq and ST-seq data. Briefings Bioinform. 25(Supplement 1) (2024) - [j55]Long Xu, Qiang Yang, Weihe Dong, Xiaokun Li, Kuanquan Wang, Suyu Dong, Xianyu Zhang, Tiansong Yang, Gongning Luo, Xingyu Liao, Xin Gao, Guohua Wang:
Meta learning for mutant HLA class I epitope immunogenicity prediction to accelerate cancer clinical immunotherapy. Briefings Bioinform. 26(1) (2024) - [j54]Tianjiao Zhang, Hao Sun, Zhenao Wu, Zhongqian Zhao, Xingjie Zhao, Hongfei Zhang, Bo Gao, Guohua Wang:
GAADE: identification spatially variable genes based on adaptive graph attention network. Briefings Bioinform. 26(1) (2024) - [j53]Tianjiao Zhang, Zhongqian Zhao, Jixiang Ren, Ziheng Zhang, Hongfei Zhang, Guohua Wang:
cfDiffusion: diffusion-based efficient generation of high quality scRNA-seq data with classifier-free guidance. Briefings Bioinform. 26(1) (2024) - [j52]Tianjiao Zhang, Xiang Zhang, Zhenao Wu, Jixiang Ren, Zhongqian Zhao, Hongfei Zhang, Guohua Wang, Tao Wang:
VGAE-CCI: variational graph autoencoder-based construction of 3D spatial cell-cell communication network. Briefings Bioinform. 26(1) (2024) - [j51]Jinsong Ke, Jianmei Zhao, Hongfei Li, Lei Yuan, Guanghui Dong, Guohua Wang:
Prediction of protein N-terminal acetylation modification sites based on CNN-BiLSTM-attention model. Comput. Biol. Medicine 174: 108330 (2024) - [j50]Jianan Wang, Zhenyuan Sun, Guohua Wang, Yan Miao:
TransGINmer: Identifying viral sequences from metagenomes with self-attention and Graph Isomorphism Network. Future Gener. Comput. Syst. 161: 445-453 (2024) - [j49]Zhanshi Zhu, Xinghua Ma, Wei Wang, Suyu Dong, Kuanquan Wang, Lianming Wu, Gongning Luo, Guohua Wang, Shuo Li:
Boosting knowledge diversity, accuracy, and stability via tri-enhanced distillation for domain continual medical image segmentation. Medical Image Anal. 94: 103112 (2024) - [j48]Qiaoming Liu, Dandan Zhang, Dong Wang, Guohua Wang, Yadong Wang:
Automatically Detecting Anchor Cells and Clustering for scRNA-Seq Data Using scTSNN. IEEE J. Biomed. Health Informatics 28(11): 7015-7027 (2024) - 2023
- [j47]Jilong Bian, Xi Zhang, Xiying Zhang, Dali Xu, Guohua Wang:
MCANet: shared-weight-based MultiheadCrossAttention network for drug-target interaction prediction. Briefings Bioinform. 24(2) (2023) - [j46]Lingyu Cui, Hongfei Li, Jilong Bian, Guohua Wang, Yingjian Liang:
Unsupervised construction of gene regulatory network based on single-cell multi-omics data of colorectal cancer. Briefings Bioinform. 24(2) (2023) - [j45]Yang Li, Zihou Guo, Keqi Wang, Xin Gao, Guohua Wang:
End-to-end interpretable disease-gene association prediction. Briefings Bioinform. 24(3) (2023) - [j44]Xin Wang, Xin Gao, Guohua Wang, Dan Li:
miProBERT: identification of microRNA promoters based on the pre-trained model BERT. Briefings Bioinform. 24(3) (2023) - [j43]Tianjiao Zhang, Liangyu Li, Hailong Sun, Dali Xu, Guohua Wang:
DeepICSH: a complex deep learning framework for identifying cell-specific silencers and their strength from the human genome. Briefings Bioinform. 24(5) (2023) - [j42]Jianmei Zhao, Fengcui Qian, Xuecang Li, Zhengmin Yu, Jiang Zhu, Rui Yu, Yue Zhao, Ke Ding, Yanyu Li, Yongsan Yang, Qi Pan, Jiaxin Chen, Chao Song, Qiuyu Wang, Jian Zhang, Guohua Wang, Chunquan Li:
CanMethdb: a database for genome-wide DNA methylation annotation in cancers. Bioinform. 39(1) (2023) - [j41]Yang Li, Zihou Guo, Xin Gao, Guohua Wang:
MMCL-CDR: enhancing cancer drug response prediction with multi-omics and morphology images contrastive representation learning. Bioinform. 39(12) (2023) - [j40]Tongtong Ren, Shan Huang, Qiaoming Liu, Guohua Wang:
scWECTA: A weighted ensemble classification framework for cell type assignment based on single cell transcriptome. Comput. Biol. Medicine 152: 106409 (2023) - [j39]Yanan Liu, Xudong Zhao, Jilong Bian, Guohua Wang:
Feature selection combined with top-down and bottom-up strategies for survival analysis: A case of prognostic prediction in glioblastoma. Comput. Biol. Medicine 153: 106486 (2023) - [j38]Ping Meng, Guohua Wang, Hongzhe Guo, Tao Jiang:
Identifying cancer driver genes using a two-stage random walk with restart on a gene interaction network. Comput. Biol. Medicine 158: 106810 (2023) - [j37]Lili Dong, Jianan Wang, Guohua Wang:
ASAS-EGB: A statistical framework for estimating allele-specific alternative splicing events using transcriptome data. Comput. Biol. Medicine 160: 106981 (2023) - [j36]BenZhi Dong, Weidong Sun, Dali Xu, Guohua Wang, Tianjiao Zhang:
MDformer: A transformer-based method for predicting miRNA-Disease associations using multi-source feature fusion and maximal meta-path instances encoding. Comput. Biol. Medicine 167: 107585 (2023) - [j35]Ke Ding, Shanwen Sun, Yang Luo, Chaoyue Long, Jingwen Zhai, Yixiao Zhai, Guohua Wang:
PlantCADB: A Comprehensive Plant Chromatin Accessibility Database. Genom. Proteom. Bioinform. 21(2): 311-323 (2023) - [j34]Fang Wang, Fan Yang, Longkai Huang, Wei Li, Jiangning Song, Robin B. Gasser, Ruedi Aebersold, Guohua Wang, Jianhua Yao:
Deep domain adversarial neural network for the deconvolution of cell type mixtures in tissue proteome profiling. Nat. Mac. Intell. 5(11): 1236-1249 (2023) - [j33]Qiaoming Liu, Xudong Zhao, Guohua Wang:
A Clustering Ensemble Method for Cell Type Detection by Multiobjective Particle Optimization. IEEE ACM Trans. Comput. Biol. Bioinform. 20(1): 1-14 (2023) - [j32]Qiaoming Liu, Dong Wang, Li Zhou, Jie Li, Guohua Wang:
MTGDC: A Multi-Scale Tensor Graph Diffusion Clustering for Single-Cell RNA Sequencing Data. IEEE ACM Trans. Comput. Biol. Bioinform. 20(5): 3056-3067 (2023) - [j31]Xin Wang, Jie Li, Guohua Wang:
MicroRNA Promoter Identification in Human With a Three-level Prediction Method. IEEE ACM Trans. Comput. Biol. Bioinform. 20(6): 3600-3608 (2023) - 2022
- [j30]Hongfei Li, Yue Gong, Yifeng Liu, Hao Lin, Guohua Wang:
Detection of transcription factors binding to methylated DNA by deep recurrent neural network. Briefings Bioinform. 23(1) (2022) - [j29]Yang Li, Guanyu Qiao, Keqi Wang, Guohua Wang:
Drug-target interaction predication via multi-channel graph neural networks. Briefings Bioinform. 23(1) (2022) - [j28]Qiaoming Liu, Jun Wan, Guohua Wang:
A survey on computational methods in discovering protein inhibitors of SARS-CoV-2. Briefings Bioinform. 23(1) (2022) - [j27]Qiaoming Liu, Ximei Luo, Jie Li, Guohua Wang:
scESI: evolutionary sparse imputation for single-cell transcriptomes from nearest neighbor cells. Briefings Bioinform. 23(5) (2022) - [j26]Tianjiao Zhang, Yuran Jia, Hongfei Li, Dali Xu, Jie Zhou, Guohua Wang:
CRISPRCasStack: a stacking strategy-based ensemble learning framework for accurate identification of Cas proteins. Briefings Bioinform. 23(5) (2022) - [j25]Tianjiao Zhang, Jie Zhou, Wentao Gao, Yuran Jia, Yanan Wei, Guohua Wang:
Complex genome assembly based on long-read sequencing. Briefings Bioinform. 23(5) (2022) - [j24]Xudong Zhao, Tong Liu, Guohua Wang:
Ensemble classification based signature discovery for cancer diagnosis in RNA expression profiles across different platforms. Briefings Bioinform. 23(5) (2022) - [j23]Xudong Zhao, Jingwen Zhai, Tong Liu, Guohua Wang:
Ensemble classification based feature selection: a case of identification on plant pentatricopeptide repeat proteins. Briefings Bioinform. 23(6) (2022) - [j22]Yang Li, Guanyu Qiao, Xin Gao, Guohua Wang:
Supervised graph co-contrastive learning for drug-target interaction prediction. Bioinform. 38(10): 2847-2854 (2022) - [j21]Xin Wang, Yadong Liu, Jie Li, Guohua Wang:
StackCirRNAPred: computational classification of long circRNA from other lncRNA based on stacking strategy. BMC Bioinform. 23(1): 563 (2022) - [j20]Xudong Zhao, Yuanyuan He, Youlin Wu, Tong Liu, Guohua Wang:
IOFS-SA: An interactive online feature selection tool for survival analysis. Comput. Biol. Medicine 150: 106121 (2022) - [j19]Longxi Zhou, Xianglin Meng, Yuxin Huang, Kai Kang, Juexiao Zhou, Yuetan Chu, Haoyang Li, Dexuan Xie, Jiannan Zhang, Weizhen Yang, Na Bai, Yi Zhao, Mingyan Zhao, Guohua Wang, Lawrence Carin, Xigang Xiao, Kaijiang Yu, Zhaowen Qiu, Xin Gao:
An interpretable deep learning workflow for discovering subvisual abnormalities in CT scans of COVID-19 inpatients and survivors. Nat. Mach. Intell. 4(5): 494-503 (2022) - 2021
- [j18]Jianan Wang, Su Chen, Lili Dong, Guohua Wang:
CHTKC: a robust and efficient k-mer counting algorithm based on a lock-free chaining hash table. Briefings Bioinform. 22(3) (2021) - [j17]Yongzhuang Liu, Yalin Huang, Guohua Wang, Yadong Wang:
A deep learning approach for filtering structural variants in short read sequencing data. Briefings Bioinform. 22(4) (2021) - [j16]Shien Huang, Xinyu He, Guohua Wang, Ergude Bao:
AlignGraph2: similar genome-assisted reassembly pipeline for PacBio long reads. Briefings Bioinform. 22(5) (2021) - [j15]Xin Wang, Yang Yang, Jian Liu, Guohua Wang:
The stacking strategy-based hybrid framework for identifying non-coding RNAs. Briefings Bioinform. 22(5) (2021) - [j14]Shanwen Sun, Lei Xu, Quan Zou, Guohua Wang:
BP4RNAseq: a babysitter package for retrospective and newly generated RNA-seq data analyses using both alignment-based and alignment-free quantification method. Bioinform. 37(9): 1319-1321 (2021) - [j13]Yang Li, Keqi Wang, Guohua Wang:
Evaluating disease similarity based on gene network reconstruction and representation. Bioinform. 37(20): 3579-3587 (2021) - [j12]Zhixia Teng, Zitong Zhang, Zhen Tian, Yanjuan Li, Guohua Wang:
ReRF-Pred: predicting amyloidogenic regions of proteins based on their pseudo amino acid composition and tripeptide composition. BMC Bioinform. 22(1): 545 (2021) - [j11]Dengfeng Guan, Shane A. McCarthy, Zemin Ning, Guohua Wang, Yadong Wang, Richard Durbin:
Efficient iterative Hi-C scaffolder based on N-best neighbors. BMC Bioinform. 22(1): 569 (2021) - [j10]Dengfeng Guan, Shane A. McCarthy, Zemin Ning, Guohua Wang, Yadong Wang, Richard Durbin:
Correction to: Efficient iterative Hi-C scaffolder based on N-best neighbors. BMC Bioinform. 22(1): 612 (2021) - 2020
- [j9]Liran Juan, Yongtian Wang, Jingyi Jiang, Qi Yang, Guohua Wang, Yadong Wang:
Evaluating individual genome similarity with a topic model. Bioinform. 36(18): 4757-4764 (2020) - [j8]Lili Dong, Jianan Wang, Guohua Wang:
BYASE: a Python library for estimating gene and isoform level allele-specific expression. Bioinform. 36(19): 4955-4956 (2020) - [j7]Xudong Zhao, Qing Jiao, Hangyu Li, Yiming Wu, Hanxu Wang, Shan Huang, Guohua Wang:
ECFS-DEA: an ensemble classifier-based feature selection for differential expression analysis on expression profiles. BMC Bioinform. 21(1): 43 (2020) - [c5]Xudong Zhao, Weiqi Su, Hangyu Li, Tong Liu, Denan Kong, Guohua Wang:
AFS-DEA: An automatic feature selection platform for differential expression analysis. BIBM 2020: 236-239
2010 – 2019
- 2018
- [j6]Guohua Wang, Ximei Luo, Jianan Wang, Jun Wan, Shuli Xia, Heng Zhu, Jiang Qian, Yadong Wang:
MeDReaders: a database for transcription factors that bind to methylated DNA. Nucleic Acids Res. 46(Database-Issue): D146-D151 (2018) - 2017
- [j5]Sheng Liu, Cristina Zibetti, Jun Wan, Guohua Wang, Seth Blackshaw, Jiang Qian:
Assessing the model transferability for prediction of transcription factor binding sites based on chromatin accessibility. BMC Bioinform. 18(1): 355 (2017) - 2016
- [c4]Yadong Wang, Kevin Burrage, Yunlong Liu, Shinichi Morishita, Tianhai Tian, Qinghua Jiang, Jiangning Song, Guohua Wang, Qian Zhu, Xiaohua Tony Hu:
Preface. BIBM 2016: 1-2 - [e1]Tianhai Tian, Qinghua Jiang, Yunlong Liu, Kevin Burrage, Jiangning Song, Yadong Wang, Xiaohua Hu, Shinichi Morishita, Qian Zhu, Guohua Wang:
IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016, Shenzhen, China, December 15-18, 2016. IEEE Computer Society 2016, ISBN 978-1-5090-1611-2 [contents] - 2015
- [j4]Quan Zou, Qinghua Hu, Maozu Guo, Guohua Wang:
HAlign: Fast multiple similar DNA/RNA sequence alignment based on the centre star strategy. Bioinform. 31(15): 2475-2481 (2015) - 2011
- [j3]Changyu Shen, Yi-Wen Huang, Yunlong Liu, Guohua Wang, Yuming Zhao, Zhiping Wang, Mingxiang Teng, Yadong Wang, David A. Flockhart, Todd C. Skaar, Pearlly Yan, Kenneth P. Nephew, Tim Hui-Ming Huang, Lang Li:
A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer. BMC Syst. Biol. 5: 67 (2011) - 2010
- [j2]Qinghua Jiang, Yangyang Hao, Guohua Wang, Liran Juan, Tianjiao Zhang, Mingxiang Teng, Yunlong Liu, Yadong Wang:
Prioritization of disease microRNAs through a human phenome-microRNAome network. BMC Syst. Biol. 4(S-1): S2 (2010)
2000 – 2009
- 2009
- [j1]Qinghua Jiang, Yadong Wang, Yangyang Hao, Liran Juan, Mingxiang Teng, Xinjun Zhang, Meimei Li, Guohua Wang, Yunlong Liu:
miR2Disease: a manually curated database for microRNA deregulation in human disease. Nucleic Acids Res. 37(Database-Issue): 98-104 (2009) - 2008
- [c3]Xin Wang, Kejun Wang, Guohua Wang, Jeremy Sanford, Yunlong Liu:
Model-based prediction of cis-acting RNA elements regulating tissue-specific alternative splicing. BIBE 2008: 1-6 - 2007
- [c2]Guohua Wang, Xin Wang, Lang Li, Kenneth P. Nephew, Howard J. Edenberg, Feng Zhou, Yunlong Liu:
Identification of Transcription Factor and microRNA Binding Sites from Array-derived Gene Expression Data. BIOCOMP 2007: 657-663 - [c1]Xin Wang, Guohua Wang, Changyu Shen, Lang Li, Xinguo Wang, Sean D. Mooney, Howard J. Edenberg, Jeremy Sanford, Yunlong Liu:
Refining Detection of RNA-Protein Binding Regions by Pyrosequencing of RNA Fragments. BIOCOMP 2007: 664-672
Coauthor Index
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