
Guixia Liu
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2020 – today
- 2020
- [j34]Jiazhi Song
, Yanchun Liang
, Guixia Liu
, Rongquan Wang
, Liyan Sun
, Ping Zhang:
A Novel Prediction Method for ATP-Binding Sites From Protein Primary Sequences Based on Fusion of Deep Convolutional Neural Network and Ensemble Learning. IEEE Access 8: 21485-21495 (2020) - [j33]Liyan Sun
, Guixia Liu
, Rongquan Wang
:
SHEIB-AGM: A Novel Stochastic Approach for Detecting High-Order Epistatic Interactions Using Bioinformation With Automatic Gene Matrix in Genome-Wide Association Studies. IEEE Access 8: 21676-21693 (2020) - [j32]Rongquan Wang, Caixia Wang, Guixia Liu:
A novel graph clustering method with a greedy heuristic search algorithm for mining protein complexes from dynamic and static PPI networks. Inf. Sci. 522: 275-298 (2020) - [j31]Yue Chen, Junhao Li, Zengrui Wu, Guixia Liu, Honglin Li, Yun Tang, Weihua Li
:
Computational Insight into the Allosteric Activation Mechanism of Farnesoid X Receptor. J. Chem. Inf. Model. 60(3): 1540-1550 (2020) - [j30]Dan Teng, Jianhui Chen, Dongping Li, Zengrui Wu, Weihua Li
, Yun Tang, Guixia Liu:
Computational Insights into Molecular Activation and Positive Cooperative Mechanisms of FFAR1 Modulators. J. Chem. Inf. Model. 60(6): 3214-3230 (2020) - [j29]Zengrui Wu, Yayuan Peng, Zhuohang Yu, Weihua Li
, Guixia Liu, Yun Tang:
NetInfer: A Web Server for Prediction of Targets and Therapeutic and Adverse Effects via Network-Based Inference Methods. J. Chem. Inf. Model. 60(8): 3687-3691 (2020)
2010 – 2019
- 2019
- [j28]Hongbin Yang
, Chaofeng Lou, Lixia Sun, Jie Li, Yingchun Cai
, Zhuang Wang, Weihua Li, Guixia Liu, Yun Tang:
admetSAR 2.0: web-service for prediction and optimization of chemical ADMET properties. Bioinform. 35(6): 1067-1069 (2019) - [j27]Rongquan Wang
, Guixia Liu, Caixia Wang:
Identifying protein complexes based on an edge weight algorithm and core-attachment structure. BMC Bioinform. 20(1): 471:1-471:20 (2019) - [j26]Lixia Sun
, Hongbin Yang
, Yingchun Cai, Weihua Li
, Guixia Liu, Yun Tang
:
In Silico Prediction of Endocrine Disrupting Chemicals Using Single-Label and Multilabel Models. J. Chem. Inf. Model. 59(3): 973-982 (2019) - [j25]Yingchun Cai, Hongbin Yang
, Weihua Li
, Guixia Liu, Philip W. Lee, Yun Tang
:
Computational Prediction of Site of Metabolism for UGT-Catalyzed Reactions. J. Chem. Inf. Model. 59(3): 1085-1095 (2019) - [j24]Feixiong Cheng, Weihua Li, Yadi Zhou, Jie Shen, Zengrui Wu, Guixia Liu, Philip W. Lee, Yun Tang
:
Correction to "admetSAR: A Comprehensive Source and Free Tool for Assessment of Chemical ADMET Properties". J. Chem. Inf. Model. 59(11): 4959 (2019) - [j23]Ping Zhang, Guixia Liu, Wanfu Gao:
Distinguishing two types of labels for multi-label feature selection. Pattern Recognit. 95: 72-82 (2019) - [j22]Xinzhe Xiao, Zehui Chen, Zengrui Wu, Tianduanyi Wang, Weihua Li, Guixia Liu, Bo Zhang, Yun Tang:
Insights into the antineoplastic mechanism of Chelidonium majus via systems pharmacology approach. Quant. Biol. 7(1): 42-53 (2019) - [c13]Chuyi Song, Guixia Liu, Jiazhi Song, Jingqing Jiang:
A Novel Prediction Method of ATP Binding Residues from Protein Primary Sequence. ISNN (2) 2019: 548-555 - 2018
- [j21]Ping Zhang, Wanfu Gao, Guixia Liu:
Feature selection considering weighted relevancy. Appl. Intell. 48(12): 4615-4625 (2018) - [j20]Lingtao Su, Guixia Liu, Tian Bai, Xiangyu Meng, Qingshan Ma:
MGOGP: a gene module-based heuristic algorithm for cancer-related gene prioritization. BMC Bioinform. 19(1): 215:1-215:12 (2018) - [j19]Rongquan Wang, Guixia Liu, Caixia Wang, Lingtao Su, Liyan Sun:
Predicting overlapping protein complexes based on core-attachment and a local modularity structure. BMC Bioinform. 19(1): 305:1-305:15 (2018) - [j18]Yingchun Cai
, Hongbin Yang
, Weihua Li
, Guixia Liu, Philip W. Lee, Yun Tang
:
Multiclassification Prediction of Enzymatic Reactions for Oxidoreductases and Hydrolases Using Reaction Fingerprints and Machine Learning Methods. J. Chem. Inf. Model. 58(6): 1169-1181 (2018) - [j17]Hongbin Yang
, Lixia Sun, Zhuang Wang, Weihua Li
, Guixia Liu, Yun Tang
:
ADMETopt: A Web Server for ADMET Optimization in Drug Design via Scaffold Hopping. J. Chem. Inf. Model. 58(10): 2051-2056 (2018) - 2017
- [j16]Zengrui Wu, Feixiong Cheng
, Jie Li, Weihua Li, Guixia Liu, Yun Tang:
SDTNBI: an integrated network and chemoinformatics tool for systematic prediction of drug-target interactions and drug repositioning. Briefings Bioinform. 18(2): 333-347 (2017) - [j15]Hanwen Du, Junhao Li, Yingchun Cai, Hongxiao Zhang, Guixia Liu, Yun Tang
, Weihua Li
:
Computational Investigation of Ligand Binding to the Peripheral Site in CYP3A4: Conformational Dynamics and Inhibitor Discovery. J. Chem. Inf. Model. 57(3): 616-626 (2017) - [j14]Dac-Trung Nguyen
, Stephen L. Mathias, Cristian Bologa, Søren Brunak
, Nicolas F. Fernandez, Anna Gaulton, Anne Hersey, Jayme Holmes, Lars Juhl Jensen
, Anneli Karlsson, Guixia Liu, Avi Ma'ayan
, Geetha Mandava, Subramani Mani, Saurabh Mehta
, John P. Overington
, Juhee Patel, Andrew D. Rouillard
, Stephan C. Schürer, Timothy Sheils
, Anton Simeonov, Larry A. Sklar, Noel Southall
, Oleg Ursu, Dusica Vidovic, Anna Waller, Jeremy J. Yang, Ajit Jadhav
, Tudor I. Oprea
, Rajarshi Guha:
Pharos: Collating protein information to shed light on the druggable genome. Nucleic Acids Res. 45(Database-Issue): D995-D1002 (2017) - [c12]Lingtao Su, Dong Xu, Guixia Liu:
A new method for disease-related gene prioritization. BIBM 2017: 2315 - 2016
- [j13]Zhihui Zhou, Guixia Liu, Lingtao Su:
A new approach to detect epistasis utilizing parallel implementation of ant colony optimization by MapReduce framework. Int. J. Comput. Math. 93(3): 511-523 (2016) - 2014
- [j12]Xiao Li
, Lei Chen, Feixiong Cheng
, Zengrui Wu, Hanping Bian, Congying Xu, Weihua Li, Guixia Liu, Xu Shen, Yun Tang:
In Silico Prediction of Chemical Acute Oral Toxicity Using Multi-Classification Methods. J. Chem. Inf. Model. 54(4): 1061-1069 (2014) - [c11]Zhihui Zhou, Guixia Liu, Lingtao Su, Liang Han, Lun Yan:
A New Epistasis Detecting Algorithm Based on Ant Colony Optimization. ICIMCS 2014: 226 - 2013
- [j11]Feixiong Cheng
, Weihua Li, Zengrui Wu, Xichuan Wang, Chen Zhang, Jie Li, Guixia Liu, Yun Tang:
Prediction of Polypharmacological Profiles of Drugs by the Integration of Chemical, Side Effect, and Therapeutic Space. J. Chem. Inf. Model. 53(4): 753-762 (2013) - [c10]Zhihui Zhou, Guixia Liu, Lingtao Su, Lun Yan, Liang Han:
CChi: An efficient cloud epistasis test model in human genome wide association studies. BMEI 2013: 787-791 - 2012
- [j10]Feixiong Cheng
, Yutaka Ikenaga, Yadi Zhou, Yue Yu, Weihua Li, Jie Shen, Zheng Du, Lei Chen, Congying Xu, Guixia Liu, Philip W. Lee, Yun Tang:
In Silico Assessment of Chemical Biodegradability. J. Chem. Inf. Model. 52(3): 655-669 (2012) - [j9]Guoping Hu, Guanglin Kuang
, Wen Xiao, Weihua Li, Guixia Liu, Yun Tang:
Performance Evaluation of 2D Fingerprint and 3D Shape Similarity Methods in Virtual Screening. J. Chem. Inf. Model. 52(5): 1103-1113 (2012) - [j8]Congying Xu, Feixiong Cheng
, Lei Chen, Zheng Du, Weihua Li, Guixia Liu, Philip W. Lee, Yun Tang:
In silico Prediction of Chemical Ames Mutagenicity. J. Chem. Inf. Model. 52(11): 2840-2847 (2012) - [j7]Weihua Li, Jing Fu, Feixiong Cheng
, Mingyue Zheng
, Jian Zhang, Guixia Liu, Yun Tang:
Unbinding Pathways of GW4064 from Human Farnesoid X Receptor As Revealed by Molecular Dynamics Simulations. J. Chem. Inf. Model. 52(11): 3043-3052 (2012) - [j6]Feixiong Cheng
, Weihua Li, Yadi Zhou, Jie Shen, Zengrui Wu, Guixia Liu, Philip W. Lee, Yun Tang:
admetSAR: A Comprehensive Source and Free Tool for Assessment of Chemical ADMET Properties. J. Chem. Inf. Model. 52(11): 3099-3105 (2012) - [j5]Feixiong Cheng
, Chuang Liu, Jing Jiang, Weiqiang Lu
, Weihua Li, Guixia Liu, Wei-Xing Zhou
, Jin Huang
, Yun Tang:
Prediction of Drug-Target Interactions and Drug Repositioning via Network-Based Inference. PLoS Comput. Biol. 8(5) (2012) - 2011
- [j4]Feixiong Cheng
, Yue Yu, Jie Shen, Lei Yang, Weihua Li, Guixia Liu, Philip W. Lee, Yun Tang:
Classification of Cytochrome P450 Inhibitors and Noninhibitors Using Combined Classifiers. J. Chem. Inf. Model. 51(5): 996-1011 (2011) - [j3]Feixiong Cheng
, Yue Yu, Yadi Zhou, Zhonghua Shen, Wen Xiao, Guixia Liu, Weihua Li, Philip W. Lee, Yun Tang:
Insights into Molecular Basis of Cytochrome P450 Inhibitory Promiscuity of Compounds. J. Chem. Inf. Model. 51(10): 2482-2495 (2011) - 2010
- [j2]Ming Zheng, Guixia Liu, Chunguang Zhou, Yanchun Liang, Yan Wang:
Gravitation field algorithm and its application in gene cluster. Algorithms Mol. Biol. 5: 32 (2010) - [j1]Yaozong Li, Jie Shen, Xianqiang Sun, Weihua Li, Guixia Liu, Yun Tang:
Accuracy Assessment of Protein-Based Docking Programs against RNA Targets. J. Chem. Inf. Model. 50(6): 1134-1146 (2010) - [c9]Ming Zheng, Guixia Liu, Deping Wang, Yan Wang, Chunguang Zhou, Yuan Tian:
Gene Regulatory Network Reconstruction with Multiple Dataset Fusion and Differential Equation. FCST 2010: 454-458
2000 – 2009
- 2009
- [c8]Shanhong Zheng, Chunguang Zhou, Guixia Liu:
Signaling Pathway Reconstruction by Fusing Priori Knowledge. ICIC (1) 2009: 55-64 - [c7]Lan Huang, Guixia Liu, Rongxing Wang, Bin Yang, Chunguang Zhou:
Improved Clonal Selection Algorithm for Protein Contact Map Prediction. NCM 2009: 1170-1175 - 2008
- [c6]Shanhong Zheng, Chunguang Zhou, Yanwen Li, Guixia Liu:
Research on Signaling Pathway Reconstruction Based on HMM. ICYCS 2008: 994-999 - 2006
- [c5]Wengang Zhou, Chunguang Zhou, Hong Zhu, Guixia Liu, Xiaoyu Chang:
Feature Selection for Microarray Data Analysis Using Mutual Information and Rough Set Theory. ICIC (3) 2006: 424-432 - [c4]Wengang Zhou, Chunguang Zhou, Guixia Liu, Hong Zhu:
Feature Selection for Microarray Data Analysis Using Mutual Information and Rough Set Theory. AIAI 2006: 492-499 - [c3]Guixia Liu, Yuanxian Zhu, Wengang Zhou, Chunguang Zhou, Rongxing Wang:
Prediction of Contact Maps Using Modified Transiently Chaotic Neural Network. ISNN (2) 2006: 696-701 - 2005
- [c2]Guixia Liu, Chunguang Zhou, Yuanxian Zhu, Wengang Zhou:
Prediction of Contact Maps in Proteins Based on Recurrent Neural Network with Bias Units. ISNN (3) 2005: 686-690 - [c1]Wengang Zhou, Chunguang Zhou, Guixia Liu, Yanxin Huang:
Identification of Transcription Factor Binding Sites Using Hybrid Particle Swarm Optimization. RSFDGrC (2) 2005: 438-445
Coauthor Index

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