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Honglin Li
This is just a disambiguation page, and is not intended to be the bibliography of an actual person. The links to all actual bibliographies of persons of the same or a similar name can be found below. Any publication listed on this page has not been assigned to an actual author yet. If you know the true author of one of the publications listed below, you are welcome to contact us.
Person information
Other persons with the same name
- Honglin Li 0001 — Zhejiang University, College of Computer Science and Technology, China (and 1 more)
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2020 – today
- 2024
- [j56]Lingyan Zheng, Shuiyang Shi, Xiuna Sun, Mingkun Lu, Yang Liao, Sisi Zhu, Hongning Zhang, Ziqi Pan, Pan Fang, Zhenyu Zeng, Honglin Li, Zhaorong Li, Weiwei Xue, Feng Zhu:
MoDAFold: a strategy for predicting the structure of missense mutant protein based on AlphaFold2 and molecular dynamics. Briefings Bioinform. 25(2) (2024) - [c20]Yuxuan Sun, Chenglu Zhu, Sunyi Zheng, Kai Zhang, Lin Sun, Zhongyi Shui, Yunlong Zhang, Honglin Li, Lin Yang:
PathAsst: A Generative Foundation AI Assistant towards Artificial General Intelligence of Pathology. AAAI 2024: 5034-5042 - 2023
- [j55]Yanyan Diao, Feng Hu, Zihao Shen, Honglin Li:
MacFrag: segmenting large-scale molecules to obtain diverse fragments with high qualities. Bioinform. 39(1) (2023) - [j54]Honglin Li, Qinghua Huang:
MAF-Net: multidimensional attention fusion network for multichannel speech separation. Multim. Syst. 29(6): 3703-3720 (2023) - [j53]Yunxia Wang, Zhen Chen, Ziqi Pan, Shijie Huang, Jin Liu, Weiqi Xia, Hongning Zhang, Mingyue Zheng, Honglin Li, Tingjun Hou, Feng Zhu:
RNAincoder: a deep learning-based encoder for RNA and RNA-associated interaction. Nucleic Acids Res. 51(W1): 509-519 (2023) - [c19]Chen Li, Yixin Dai, Honglin Li, Pui Yin Yip:
Remote art therapy in collaborative virtual environment: a pilot study on feasibility and usability. VRW 2023: 665-666 - 2022
- [j52]Mingyang Wang, Huiyong Sun, Jike Wang, Jinping Pang, Xin Chai, Lei Xu, Honglin Li, Dongsheng Cao, Tingjun Hou:
Comprehensive assessment of deep generative architectures for de novo drug design. Briefings Bioinform. 23(1) (2022) - [j51]Ziyan Feng, Zihao Shen, Honglin Li, Shiliang Li:
e-TSN: an interactive visual exploration platform for target-disease knowledge mapping from literature. Briefings Bioinform. 23(6) (2022) - [j50]Jie Wang, Zihao Shen, Yichen Liao, Zhen Yuan, Shiliang Li, Gaoqi He, Man Lan, Xuhong Qian, Kai Zhang, Honglin Li:
Multi-modal chemical information reconstruction from images and texts for exploring the near-drug space. Briefings Bioinform. 23(6) (2022) - [j49]Hanyu Zhang, Yunxia Wang, Ziqi Pan, Xiuna Sun, Minjie Mou, Bing Zhang, Zhaorong Li, Honglin Li, Feng Zhu:
ncRNAInter: a novel strategy based on graph neural network to discover interactions between lncRNA and miRNA. Briefings Bioinform. 23(6) (2022) - [j48]Shun Liu, Jianchao Zhou, Ziyan Feng, Jiawen Zhang, Shuang Li, Zilong Jin, Chenfei Zhang, Shiliang Li, Gaoqi He, Honglin Li:
VRPharmer: bringing virtual reality into pharmacophore-based virtual screening with interactive exploration and realistic visualization. Bioinform. 38(21): 4953-4955 (2022) - [j47]Weiqi Xia, Lingyan Zheng, Jiebin Fang, Fengcheng Li, Ying Zhou, Zhenyu Zeng, Bing Zhang, Zhaorong Li, Honglin Li, Feng Zhu:
PFmulDL: a novel strategy enabling multi-class and multi-label protein function annotation by integrating diverse deep learning methods. Comput. Biol. Medicine 145: 105465 (2022) - [j46]Ruifan Cai, Honglin Li, Jun Xie, Xiaogang Jin:
Accurate floorplan reconstruction using geometric priors. Comput. Graph. 102: 360-369 (2022) - [j45]Hongling Zhu, Jinsheng Lai, Bingqiang Liu, Ziyuan Wen, Yulong Xiong, Honglin Li, Yuhua Zhou, Qiuyun Fu, Guoyi Yu, Xiaoxiang Yan, Xiaoyun Yang, Jianmin Zhang, Chao Wang, Hesong Zeng:
Automatic pulmonary auscultation grading diagnosis of Coronavirus Disease 2019 in China with artificial intelligence algorithms: A cohort study. Comput. Methods Programs Biomed. 213: 106500 (2022) - [j44]Zhanpeng Xu, Jianhua Li, Zhaopeng Yang, Shiliang Li, Honglin Li:
SwinOCSR: end-to-end optical chemical structure recognition using a Swin Transformer. J. Cheminformatics 14(1): 41 (2022) - [j43]Mingyang Wang, Jike Wang, Gaoqi Weng, Yu Kang, Peichen Pan, Dan Li, Yafeng Deng, Honglin Li, Chang-Yu Hsieh, Tingjun Hou:
ReMODE: a deep learning-based web server for target-specific drug design. J. Cheminformatics 14(1): 84 (2022) - [j42]Tongdan Jin, Honglin Li, Siva Prashanth Kumar Prabha:
Supply chain design for transactive energy operations in the nexus of manufacturing, microgrid and climate. J. Oper. Res. Soc. 73(11): 2395-2411 (2022) - [j41]Jianhua Li, Guanlong Liu, Zhiyuan Zhen, Zihao Shen, Shiliang Li, Honglin Li:
Molecular Docking for Ligand-Receptor Binding Process Based on Heterogeneous Computing. Sci. Program. 2022: 9197606:1-9197606:13 (2022) - [c18]Honglin Li, Chen Li:
Dive In! Computer World Action: A Platform Game for Secondary School Students to Learn Boolean Operations in Computer Science. CHI PLAY 2022: 279-285 - [c17]Tim Grams, Honglin Li, Bo Tong, Ali Shaban, Tobias Weller:
Semantic Video Entity Linking. ESWC (Satellite Events) 2022: 129-132 - 2021
- [j40]Luyuan Wang, Honglin Li, Qinjie Xiao, Xinran Yao, Xiaoyu Pan, Yuqing Zhang, Xiaogang Jin:
Automatic pose and wrinkle transfer for aesthetic garment display. Comput. Aided Geom. Des. 89: 102020 (2021) - [j39]Ruifan Cai, Yingying Lin, Honglin Li, Yuzhen Zhu, Xiangjun Tang, Yanjun Weng, Lihua You, Xiaogang Jin:
Wowtao: A personalized pottery-making system. Comput. Ind. 124: 103325 (2021) - [j38]Zhaoqi Wang, Xiang Liu, Hao Wang, Kai Zheng, Honglin Li, Gaini Wang, Zhifang An:
Monitoring Vegetation Greenness in Response to Climate Variation along the Elevation Gradient in the Three-River Source Region of China. ISPRS Int. J. Geo Inf. 10(3): 193 (2021) - [j37]Yuxia Mao, Shiliang Li, Bojie Gong, Luhua Lai, Gaoqi He, Honglin Li:
ePharmer: An integrated and graphical software for pharmacophore-based virtual screening. J. Comput. Chem. 42(30): 2181-2195 (2021) - [j36]Yuxia Mao, Shiliang Li, Bojie Gong, Luhua Lai, Gaoqi He, Honglin Li:
Cover Image. J. Comput. Chem. 42(30): i (2021) - [j35]Xiaoyu Pan, Jiancong Huang, Jiaming Mai, He Wang, Honglin Li, Tongkui Su, Wenjun Wang, Xiaogang Jin:
HeterSkinNet: A Heterogeneous Network for Skin Weights Prediction. Proc. ACM Comput. Graph. Interact. Tech. 4(1): 10:1-10:19 (2021) - [j34]Zhaoqi Wang, Guolong Cui, Xiang Liu, Kai Zheng, Zhiyuan Lu, Honglin Li, Gaini Wang, Zhifang An:
Greening of the Qinghai-Tibet Plateau and Its Response to Climate Variations along Elevation Gradients. Remote. Sens. 13(18): 3712 (2021) - [j33]Honglin Li, Payam M. Barnaghi, Shirin Enshaeifar, Frieder Ganz:
Continual Learning Using Bayesian Neural Networks. IEEE Trans. Neural Networks Learn. Syst. 32(9): 4243-4252 (2021) - [j32]Honglin Li, Xiaoyang Mao, Mengdi Xu, Xiaogang Jin:
Deep-based Self-refined Face-top Coordination. ACM Trans. Multim. Comput. Commun. Appl. 17(3): 95:1-95:23 (2021) - [j31]Xinyang Guan, Likang Luo, Honglin Li, He Wang, Chen Liu, Su Wang, Xiaogang Jin:
Automatic embroidery texture synthesis for garment design and online display. Vis. Comput. 37(9-11): 2553-2565 (2021) - [c16]Honglin Li, Tao Zhang, Yu Huang:
Digital Twin Technology for Integrated Energy System and Its Application. DTPI 2021: 422-425 - [i10]Honglin Li, Roonak Rezvani, Magdalena Anita Kolanko, David J. Sharp, Maitreyee Wairagkar, Ravi Vaidyanathan, Ramin Nilforooshan, Payam M. Barnaghi:
An attention model to analyse the risk of agitation and urinary tract infections in people with dementia. CoRR abs/2101.07007 (2021) - [i9]Xiaoyu Pan, Jiancong Huang, Jiaming Mai, He Wang, Honglin Li, Tongkui Su, Wenjun Wang, Xiaogang Jin:
HeterSkinNet: A Heterogeneous Network for Skin Weights Prediction. CoRR abs/2103.10602 (2021) - [i8]Francesca Palermo, Honglin Li, Alexander Capstick, Nan Fletcher-Lloyd, Yuchen Zhao, Samaneh Kouchaki, Ramin Nilforooshan, David J. Sharp, Payam M. Barnaghi:
Designing A Clinically Applicable Deep Recurrent Model to Identify Neuropsychiatric Symptoms in People Living with Dementia Using In-Home Monitoring Data. CoRR abs/2110.09868 (2021) - 2020
- [j30]Yue Chen, Junhao Li, Zengrui Wu, Guixia Liu, Honglin Li, Yun Tang, Weihua Li:
Computational Insight into the Allosteric Activation Mechanism of Farnesoid X Receptor. J. Chem. Inf. Model. 60(3): 1540-1550 (2020) - [j29]Qingxia Yang, Yunxia Wang, Ying Zhang, Fengcheng Li, Weiqi Xia, Ying Zhou, Yunqing Qiu, Honglin Li, Feng Zhu:
NOREVA: enhanced normalization and evaluation of time-course and multi-class metabolomic data. Nucleic Acids Res. 48(Webserver-Issue): W436-W448 (2020) - [c15]Honglin Li, Yifei Fan, Frieder Ganz, Anthony J. Yezzi, Payam M. Barnaghi:
Verifying the Causes of Adversarial Examples. ICPR 2020: 6750-6757 - [i7]Honglin Li, Payam M. Barnaghi, Shirin Enshaeifar, Frieder Ganz:
Continual Learning Using Task Conditional Neural Networks. CoRR abs/2005.05080 (2020) - [i6]Honglin Li, Yifei Fan, Frieder Ganz, Anthony J. Yezzi, Payam M. Barnaghi:
Verifying the Causes of Adversarial Examples. CoRR abs/2010.09633 (2020) - [i5]Yuchen Zhao, Hanyang Liu, Honglin Li, Payam M. Barnaghi, Hamed Haddadi:
Semi-supervised Federated Learning for Activity Recognition. CoRR abs/2011.00851 (2020) - [i4]Honglin Li, Payam M. Barnaghi, Severin Skillman, David J. Sharp, Ramin Nilforooshan, Helen Rostill:
Machine learning for risk analysis of Urinary Tract Infection in people with dementia. CoRR abs/2011.13916 (2020)
2010 – 2019
- 2019
- [j28]Gaoqi He, Yiping Song, Wenhao Wei, Xia Wang, Xingjian Lu, Honglin Li:
eSHAFTS: Integrated and graphical drug design software based on 3D molecular similarity. J. Comput. Chem. 40(6): 826-838 (2019) - [j27]Wen Yang, Xia Wang, Kenan Li, Yuanru Liu, Ying Liu, Rui Wang, Honglin Li:
Pharmacodynamics simulation of HOEC by a computational model of arachidonic acid metabolic network. Quant. Biol. 7(1): 30-41 (2019) - [j26]Honglin Li, Masahiro Toyoura, Xiaoyang Mao:
Caricature synthesis with feature deviation matching under example-based framework. Vis. Comput. 35(5): 653-666 (2019) - [c14]Honglin Li, Ying Wang, Ruijin Sun, Shan Guo, Hong Wang:
Delay-Based Congestion Control for Multipath TCP in Heterogeneous Wireless Networks. WCNC Workshops 2019: 1-6 - [c13]Hong Wang, Ying Wang, Ruijin Sun, Shan Guo, Honglin Li:
Joint Video Caching and User Association With Mobile Edge Computing. WCNC Workshops 2019: 1-6 - [i3]Honglin Li, Shirin Enshaeifar, Frieder Ganz, Payam M. Barnaghi:
Continual Learning in Deep Neural Network by Using a Kalman Optimiser. CoRR abs/1905.08119 (2019) - [i2]Honglin Li, Payam M. Barnaghi, Shirin Enshaeifar, Frieder Ganz:
Continual Learning Using Bayesian Neural Networks. CoRR abs/1910.04112 (2019) - 2018
- [j25]Junming Li, Jinfeng Wang, Nannan Wang, Honglin Li:
A Bayesian Space-Time Hierarchical Model for Remotely Sensed Lattice Data Based on Multiscale Homogeneous Statistical Units. IEEE J. Sel. Top. Appl. Earth Obs. Remote. Sens. 11(7): 2151-2161 (2018) - [c12]Rungtai Lin, Honglin Li, Jun Wu, Wei Bi:
Cross-Cultural Communication in Design Collaboration. HCI (11) 2018: 31-42 - [c11]John G. Kreifeldt, Honglin Li, Ming-Xean Sun, Wei Bi, Rungtai Lin:
S.A.D in Education and CHEER in Practice: A Case Study of DTIT Program at NTUA. HCI (12) 2018: 160-171 - [i1]Honglin Li, Frieder Ganz, Shirin Enshaeifar, Payam M. Barnaghi:
Kalman Filter Modifier for Neural Networks in Non-stationary Environments. CoRR abs/1811.02361 (2018) - 2017
- [j24]Wei Xiao, Zenghui He, Meijian Sun, Shiliang Li, Honglin Li:
Statistical Analysis, Investigation, and Prediction of the Water Positions in the Binding Sites of Proteins. J. Chem. Inf. Model. 57(7): 1517-1528 (2017) - [j23]Xia Wang, Yihang Shen, Shiwei Wang, Shiliang Li, Weilin Zhang, Xiaofeng Liu, Luhua Lai, Jianfeng Pei, Honglin Li:
PharmMapper 2017 update: a web server for potential drug target identification with a comprehensive target pharmacophore database. Nucleic Acids Res. 45(Webserver-Issue): W356-W360 (2017) - [c10]Caie Xu, Shota Fushimi, Masahiro Toyoura, Jiayi Xu, Honglin Li, Xiaoyang Mao:
Synthesis of Facial Images Based on Relevance Feedback. CW 2017: 210-213 - 2016
- [j22]Meijian Sun, Xia Wang, Chuanxin Zou, Zenghui He, Wei Liu, Honglin Li:
Accurate prediction of RNA-binding protein residues with two discriminative structural descriptors. BMC Bioinform. 17: 231 (2016) - [j21]Xia Wang, Chenxu Pan, Jiayu Gong, Xiaofeng Liu, Honglin Li:
Enhancing the Enrichment of Pharmacophore-Based Target Prediction for the Polypharmacological Profiles of Drugs. J. Chem. Inf. Model. 56(6): 1175-1183 (2016) - [j20]Honglin Li, Masahiro Toyoura, Kazumi Shimizu, Wei Yang, Xiaoyang Mao:
Retrieval of clothing images based on relevance feedback with focus on collar designs. Vis. Comput. 32(10): 1351-1363 (2016) - [c9]Honglin Li, Zhiguo Gong:
Breaking the Top-k Restriction of the kNN Hidden Databases. CCBD 2016: 302-307 - [c8]Honglin Li, Wei Yang, Hongchang Sun, Masahiro Toyoura, Xiaoyang Mao:
Example-based Caricature Synthesis via Feature Deviation Matching. CGI (Short Papers) 2016: 81-84 - 2015
- [j19]Fang Bai, Sha Liao, Junfeng Gu, Hualiang Jiang, Xicheng Wang, Honglin Li:
An Accurate Metalloprotein-Specific Scoring Function and Molecular Docking Program Devised by a Dynamic Sampling and Iteration Optimization Strategy. J. Chem. Inf. Model. 55(4): 833-847 (2015) - 2014
- [j18]Xia Wang, Haipeng Chen, Feng Yang, Jiayu Gong, Shiliang Li, Jianfeng Pei, Xiaofeng Liu, Hualiang Jiang, Luhua Lai, Honglin Li:
iDrug: a web-accessible and interactive drug discovery and design platform. J. Cheminformatics 6(1): 28 (2014) - 2013
- [j17]Jiayu Gong, Xiaofeng Liu, Xianwen Cao, Yanyan Diao, Daqi Gao, Honglin Li, Xuhong Qian:
PTID: an integrated web resource and computational tool for agrochemical discovery. Bioinform. 29(2): 292-294 (2013) - [j16]Jiayu Gong, Chaoqian Cai, Xiaofeng Liu, Xin Ku, Hualiang Jiang, Daqi Gao, Honglin Li:
ChemMapper: a versatile web server for exploring pharmacology and chemical structure association based on molecular 3D similarity method. Bioinform. 29(14): 1827-1829 (2013) - [j15]Chuanxin Zou, Jiayu Gong, Honglin Li:
An improved sequence based prediction protocol for DNA-binding proteins using SVM and comprehensive feature analysis. BMC Bioinform. 14: 90 (2013) - [j14]Chaoqian Cai, Jiayu Gong, Xiaofeng Liu, Daqi Gao, Honglin Li:
SimG: An Alignment Based Method for Evaluating the Similarity of Small Molecules and Binding Sites. J. Chem. Inf. Model. 53(8): 2103-2115 (2013) - 2011
- [j13]Fei Peng, Honglin Li:
A Steganalysis Method for 2D Engineering Graphics Based on the Statistic of Geometric Features. Int. J. Digit. Crime Forensics 3(2): 35-40 (2011) - [j12]Xiaofeng Liu, Hualiang Jiang, Honglin Li:
SHAFTS: A Hybrid Approach for 3D Molecular Similarity Calculation. 1. Method and Assessment of Virtual Screening. J. Chem. Inf. Model. 51(9): 2372-2385 (2011) - [j11]Shiliang Li, Yi Zhou, Weiqiang Lu, Ye Zhong, Wenlong Song, Kangdong Liu, Jin Huang, Zhenjiang Zhao, Yufang Xu, Xiaofeng Liu, Honglin Li:
Identification of Inhibitors against p90 Ribosomal S6 Kinase 2 (RSK2) through Structure-Based Virtual Screening with the Inhibitor-Constrained Refined Homology Model. J. Chem. Inf. Model. 51(11): 2939-2947 (2011) - 2010
- [j10]Fang Bai, Xiaofeng Liu, Jiabo Li, Haoyun Zhang, Hualiang Jiang, Xicheng Wang, Honglin Li:
Bioactive Conformational Generation of Small Molecules: A Comparative Analysis between Force-Field and Multiple Empirical Criteria Based Methods. BMC Bioinform. 11: 545 (2010) - [j9]Xiaofeng Liu, Sisheng Ouyang, Biao Yu, Yabo Liu, Kai Huang, Jiayu Gong, Siyuan Zheng, Zhihua Li, Honglin Li, Hualiang Jiang:
PharmMapper server: a web server for potential drug target identification using pharmacophore mapping approach. Nucleic Acids Res. 38(Web-Server-Issue): 609-614 (2010)
2000 – 2009
- 2009
- [j8]Honglin Li, Hailei Zhang, Mingyue Zheng, Jie Luo, Ling Kang, Xiaofeng Liu, Xicheng Wang, Hualiang Jiang:
An effective docking strategy for virtual screening based on multi-objective optimization algorithm. BMC Bioinform. 10 (2009) - [j7]Xiaofeng Liu, Fang Bai, Sisheng Ouyang, Xicheng Wang, Honglin Li, Hualiang Jiang:
Cyndi: a multi-objective evolution algorithm based method for bioactive molecular conformational generation. BMC Bioinform. 10 (2009) - [j6]Ling Kang, Honglin Li, Hualiang Jiang, Xicheng Wang:
An improved adaptive genetic algorithm for protein-ligand docking. J. Comput. Aided Mol. Des. 23(1): 1-12 (2009) - [j5]Junfeng Gu, Honglin Li, Hualiang Jiang, Xicheng Wang:
Optimizing Energy Potential for Protein Fold Recognition with Parametric Evaluation Function. J. Comput. Biol. 16(3): 427-442 (2009) - 2008
- [j4]Zhenting Gao, Honglin Li, Hailei Zhang, Xiaofeng Liu, Ling Kang, Xiaomin Luo, Weiliang Zhu, Kaixian Chen, Xicheng Wang, Hualiang Jiang:
PDTD: a web-accessible protein database for drug target identification. BMC Bioinform. 9 (2008) - [j3]Xiaoyu Zhao, Xiaofeng Liu, Yuanyuan Wang, Zhi Chen, Ling Kang, Hailei Zhang, Xiaomin Luo, Weiliang Zhu, Kaixian Chen, Honglin Li, Xicheng Wang, Hualiang Jiang:
An Improved PMF Scoring Function for Universally Predicting the Interactions of a Ligand with Protein, DNA, and RNA. J. Chem. Inf. Model. 48(7): 1438-1447 (2008) - [j2]Xinli Liu, Yechun Xu, Honglin Li, Xicheng Wang, Hualiang Jiang, Francisco J. Barrantes:
Mechanics of Channel Gating of the Nicotinic Acetylcholine Receptor. PLoS Comput. Biol. 4(1) (2008) - 2006
- [j1]Honglin Li, Zhenting Gao, Ling Kang, Hailei Zhang, Kun Yang, Kunqian Yu, Xiaomin Luo, Weiliang Zhu, Kaixian Chen, Jianhua Shen, Xicheng Wang, Hualiang Jiang:
TarFisDock: a web server for identifying drug targets with docking approach. Nucleic Acids Res. 34(Web-Server-Issue): 219-224 (2006) - [c7]Aijuan Dong, Honglin Li:
Integrated Documentary Video Access for Education. CATA 2006: 168-173 - [c6]Taufik Fuadi Abidin, Aijuan Dong, Honglin Li, William Perrizo:
Efficient Image Classification on Vertically Decomposed Data. ICDE Workshops 2006: 14 - [c5]Aijuan Dong, Honglin Li:
Semantic Segmentation of Documentary Video using Music Breaks. ICME 2006: 1825-1828 - [c4]Aijuan Dong, Honglin Li:
Multi-ontology Based Multimedia Annotation for Domain-specific Information Retrieval. SUTC (2) 2006: 158-165 - 2005
- [c3]Aijuan Dong, Honglin Li:
Ontology- Based Information Integration in Virtual Learning Environment. Web Intelligence 2005: 762-765 - 2004
- [c2]Yi Zhao, Honglin Li, Stanley C. Ahalt:
Optimized packet interleaving for streaming applications on burst-lossy channels. Visual Information Processing 2004: 241-251 - 2002
- [c1]Yi Zhao, Honglin Li, Stanley C. Ahalt:
Multiclass kernel-based feature extraction. Data Mining and Knowledge Discovery: Theory, Tools, and Technology 2002: 9-16
Coauthor Index
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