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ORCIDNúria Queralt-Rosinach
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- affiliation: Leiden Univeristy, Medical Center (LUMC), The Netherlands
- affiliation (PhD 2010): University of Rovira i Virgili, Tarragona, Spain
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Journal Articles
- 2023
[j17]César Henrique Bernabé, Núria Queralt-Rosinach, Vítor E. Silva Souza, Luiz Olavo Bonino da Silva Santos, Barend Mons, Annika Jacobsen, Marco Roos:
The use of foundational ontologies in biomedical research. J. Biomed. Semant. 14(1): 21 (2023)- 2022
- [j16]Nicolas Matentzoglu
, James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew H. Brush, Tiffany J. Callahan, Christopher G. Chute, William D. Duncan, Chris T. A. Evelo, Davera Gabriel, John Graybeal, Alasdair J. G. Gray, Benjamin M. Gyori, Melissa A. Haendel, Henriette Harmse, Nomi L. Harris, Ian Harrow, Harshad Hegde, Amelia L. Hoyt, Charles Tapley Hoyt, Dazhi Jiao, Ernesto Jiménez-Ruiz, Simon Jupp, Hyeongsik Kim, Sebastian Köhler, Thomas Liener, Qinqin Long, James Malone, James A. McLaughlin, Julie A. McMurry, Sierra A. T. Moxon, Monica C. Munoz-Torres, David Osumi-Sutherland, James A. Overton, Bjoern Peters, Tim E. Putman, Núria Queralt-Rosinach, Kent A. Shefchek, Harold Solbrig, Anne E. Thessen, Tania Tudorache, Nicole A. Vasilevsky, Alex H. Wagner, Christopher J. Mungall:
A Simple Standard for Sharing Ontological Mappings (SSSOM). Database J. Biol. Databases Curation 2022(2022) (2022) - [j15]Michael Mayers, Roger Tu, Dylan Steinecke, Tong Shu Li, Núria Queralt-Rosinach, Andrew I. Su:
Design and application of a knowledge network for automatic prioritization of drug mechanisms. Bioinform. 38(10): 2880-2891 (2022) - [j14]Rajaram Kaliyaperumal, Mark D. Wilkinson, Pablo Alarcón Moreno, Nirupama Benis, Ronald Cornet, Bruna dos Santos Vieira, Michel Dumontier, César Henrique Bernabé, Annika Jacobsen, Clémence M. A. Le Cornec, Mario Prieto Godoy, Núria Queralt-Rosinach, Leo J. Schultze Kool, Morris A. Swertz, Philip van Damme, K. Joeri van der Velde, Nawel Lalout, Shuxin Zhang, Marco Roos:
Semantic modelling of common data elements for rare disease registries, and a prototype workflow for their deployment over registry data. J. Biomed. Semant. 13(1): 9 (2022) - [j13]Núria Queralt-Rosinach, Rajaram Kaliyaperumal, César Henrique Bernabé, Qinqin Long, Simone A. Joosten, Henk Jan van der Wijk, Erik Flikkenschild, Kees Burger, Annika Jacobsen, Barend Mons, Marco Roos:
Applying the FAIR principles to data in a hospital: challenges and opportunities in a pandemic. J. Biomed. Semant. 13(1): 12 (2022) - [j12]Núria Queralt-Rosinach:
A formalization of one of the main claims of "Mutations in NGLY1 cause an inherited disorder of the endoplasmic reticulum-associated degradation pathway" by Enns et al. 20141. Data Sci. 5(1): 57-59 (2022) - 2020
- [j11]Núria Queralt-Rosinach, Gregory S. Stupp, Tong Shu Li, Michael Mayers, Maureen E. Hoatlin, Matthew Might, Benjamin M. Good, Andrew I. Su:
Structured reviews for data and knowledge-driven research. Database J. Biol. Databases Curation 2020 (2020) - 2019
- [j10]Michael Mayers, Tong Shu Li, Núria Queralt-Rosinach, Andrew I. Su:
Time-resolved evaluation of compound repositioning predictions on a text-mined knowledge network. BMC Bioinform. 20(1): 653 (2019) - 2017
- [j9]Mona Alshahrani, Mohammad Asif Khan, Omar Maddouri, Akira R. Kinjo, Núria Queralt-Rosinach, Robert Hoehndorf:
Neuro-symbolic representation learning on biological knowledge graphs. Bioinform. 33(17): 2723-2730 (2017) - [j8]Robert Hoehndorf, Núria Queralt-Rosinach:
Data Science and symbolic AI: Synergies, challenges and opportunities. Data Sci. 1(1-2): 27-38 (2017) - [j7]Janet Piñero González, Àlex Bravo, Núria Queralt-Rosinach, Alba Gutiérrez-Sacristán, Jordi Deu-Pons, Emilio Centeno, Javier García-García, Ferran Sanz, Laura I. Furlong:
DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants. Nucleic Acids Res. 45(Database-Issue): D833-D839 (2017) - 2016
- [j6]Núria Queralt-Rosinach, Janet Piñero González, Àlex Bravo, Ferran Sanz, Laura I. Furlong:
DisGeNET-RDF: harnessing the innovative power of the Semantic Web to explore the genetic basis of diseases. Bioinform. 32(14): 2236-2238 (2016) - [j5]Tobias Kuhn, Christine Chichester, Michael Krauthammer, Núria Queralt-Rosinach, Ruben Verborgh, George Giannakopoulos, Axel-Cyrille Ngonga Ngomo, Raffaele Viglianti, Michel Dumontier:
Decentralized provenance-aware publishing with nanopublications. PeerJ Comput. Sci. 2: e78 (2016) - [j4]Núria Queralt-Rosinach, Tobias Kuhn, Christine Chichester, Michel Dumontier, Ferran Sanz, Laura I. Furlong:
Publishing DisGeNET as nanopublications. Semantic Web 7(5): 519-528 (2016) - 2015
- [j3]Janet Piñero González, Núria Queralt-Rosinach, Àlex Bravo, Jordi Deu-Pons, Anna Bauer-Mehren, Martin Baron, Ferran Sanz, Laura Inés Furlong:
DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes. Database J. Biol. Databases Curation 2015 (2015) - [j2]Àlex Bravo, Janet Piñero González, Núria Queralt-Rosinach, Michael Rautschka, Laura Inés Furlong:
Extraction of relations between genes and diseases from text and large-scale data analysis: implications for translational research. BMC Bioinform. 16: 55:1-55:17 (2015) - 2014
- [j1]Michel Dumontier, Christopher J. O. Baker, Joachim Baran, Alison Callahan, Leonid L. Chepelev, Jose Cruz-Toledo, Nicholas R. Del Rio, Geraint Duck, Laura Inés Furlong, Nichealla Keath, Dana Klassen, Jamie P. McCusker, Núria Queralt-Rosinach, Matthias Samwald, Natalia Villanueva-Rosales, Mark D. Wilkinson, Robert Hoehndorf:
The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery. J. Biomed. Semant. 5: 14 (2014)
Conference and Workshop Papers
- 2023
- [c15]Pablo Perdomo-Quinteiro, Sergiu Siminiuc, Paraskevi Sakellariou, Marco Roos, Pietro Spitali, Núria Queralt-Rosinach:
FAIRification and semantic modelling for Duchenne and Becker Muscular Dystrophy rare diseases. SWAT4HCLS 2023: 130-132 - [c14]Karolis Cremers, Marco Roos, Katy Wolstencroft, Eleni Mina, Núria Queralt-Rosinach:
Structured review on Huntington's disease iron hypothesis. SWAT4HCLS 2023: 147-148 - [c13]Núria Queralt-Rosinach, Paul N. Schofield, Marco Roos, Robert Hoehndorf:
Updating the CEMO ontology for future epidemiological challenges. SWAT4HCLS 2023: 151-152 - 2022
- [c12]Rajaram Kaliyaperumal, Gurnoor Singh, Núria Queralt-Rosinach, Jumamurat Bayjanov, Peter Bram 't Hoen, Marco Roos:
Phenopackets for the Semantic Web. SWAT4HCLS 2022: 29-33 - [c11]César Henrique Bernabé, Núria Queralt-Rosinach, Vítor E. Silva Souza, Luiz Olavo Bonino da Silva Santos, Annika Jacobsen, Barend Mons, Marco Roos:
The Use of Foundational Ontologies in Bioinformatics. SWAT4HCLS 2022: 34-43 - 2021
- [c10]Rajaram Kaliyaperumal, Núria Queralt Rosinach, Kees Burger, Luiz Olavo Bonino da Silva Santos, Marc Hanauer, Marco Roos:
Enabling FAIR Discovery of Rare Disease Digital Resources. dHealth 2021: 144-146 - [c9]Núria Queralt-Rosinach, César Henrique Bernabé, Qinqin Long, Rajaram Kaliyaperumal, Marco Roos:
LUMC Clinical Ontology for Biomedical Research. ICBO 2021: 84-88 - [c8]Núria Queralt-Rosinach, Mark D. Wilkinson, Rajaram Kaliyaperumal, César Henrique Bernabé, Qinqin Long, Michel Dumontier, Paul N. Schofield, Marco Roos:
Reuse of Design Pattern Measurements for Health Data. JOWO 2021 - 2020
- [c7]Núria Queralt Rosinach, Rajaram Kaliyaperumal, César Henrique Bernabé, Qinqin Long, Henk Jan van der Wijk, Barend Mons, Marco Roos:
FAIR Data Management to Access Patient Data. DaMaLOS 2020: 1-10 - 2018
- [c6]Tobias Kuhn, Albert Meroño-Peñuela, Alexander Malic, Jorrit H. Poelen, Allen H. Hurlbert, Emilio Centeno Ortiz, Laura I. Furlong, Núria Queralt-Rosinach, Christine Chichester, Juan M. Banda, Egon L. Willighagen, Friederike Ehrhart, Chris T. A. Evelo, Tareq B. Malas, Michel Dumontier:
Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data. eScience 2018: 83-92 - 2017
- [c5]Tobias Kuhn, Egon L. Willighagen, Chris T. A. Evelo, Núria Queralt-Rosinach, Emilio Centeno, Laura I. Furlong:
Reliable Granular References to Changing Linked Data. ISWC (1) 2017: 436-451 - 2016
- [c4]Andra Waagmeester, Egon L. Willighagen, Núria Queralt Rosinach, Elvira Mitraka, Sebastian Burgstaller-Muehlbacher, Tim E. Putman, Julia Turner, Lynn M. Schriml, Paul Pavlidis, Andrew I. Su, Benjamin M. Good:
Linking Wikidata to the Rest of the Semantic Web. SWAT4LS 2016 - 2015
- [c3]Gang Fu, Evan Bolton, Núria Queralt-Rosinach, Laura Inés Furlong, Vinh Nguyen, Amit P. Sheth, Olivier Bodenreider, Michel Dumontier:
Exposing Provenance Metadata Using Different RDF Models. SWAT4LS 2015: 167-176 - 2013
- [c2]Núria Queralt-Rosinach, Laura Inés Furlong:
DisGeNET RDF: A Gene-Disease Association Linked Open Data Resource. SWAT4LS 2013 - 2012
- [c1]Núria Queralt-Rosinach, Laura Inés Furlong:
DisGeNET: from MySQL to Nanopublication, Modelling Gene-Disease Associations for the Semantic Web. SWAT4LS 2012
Informal and Other Publications
- 2021
- [i8]Nicolas Matentzoglu, James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew H. Brush, Tiffany J. Callahan, Christopher G. Chute, William D. Duncan, Chris T. A. Evelo, Davera Gabriel, John Graybeal, Alasdair J. G. Gray, Benjamin M. Gyori, Melissa A. Haendel, Henriette Harmse, Nomi L. Harris, Ian Harrow, Harshad Hegde, Amelia L. Hoyt, Charles Tapley Hoyt, Dazhi Jiao, Ernesto Jiménez-Ruiz, Simon Jupp, Hyeongsik Kim, Sebastian Köhler, Thomas Liener, Qinqin Long, James Malone, James A. McLaughlin, Julie A. McMurry, Sierra A. T. Moxon, Monica C. Munoz-Torres, David Osumi-Sutherland, James A. Overton, Bjoern Peters, Tim E. Putman, Núria Queralt-Rosinach, Kent A. Shefchek, Harold Solbrig, Anne E. Thessen, Tania Tudorache, Nicole A. Vasilevsky, Alex H. Wagner, Christopher J. Mungall:
A Simple Standard for Sharing Ontological Mappings (SSSOM). CoRR abs/2112.07051 (2021) - 2020
- [i7]Rutger A. Vos, Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim, Yuki Moriya, Toshiaki Tokimatsu, Atsuko Yamaguchi, Yasunori Yamamoto, Hongyan Wu, Peter Amstutz, Erick Antezana, Nobuyuki P. Aoki, Kazuharu Arakawa, Jerven T. Bolleman, Evan E. Bolton, Raoul Jean Pierre Bonnal, Hidemasa Bono, Kees Burger, Hirokazu Chiba, Kevin Bretonnel Cohen, Eric W. Deutsch, Jesualdo Tomás Fernández-Breis, Gang Fu, Takatomo Fujisawa, Atsushi Fukushima, Alexander García Castro, Naohisa Goto, Tudor Groza, Colin Hercus, Robert Hoehndorf, Kotone Itaya, Nick S. Juty, Takeshi Kawashima, Jee-Hyub Kim, Akira R. Kinjo, Masaaki Kotera, Kouji Kozaki, Sadahiro Kumagai, Tatsuya Kushida, Thomas Lütteke, Masaaki Matsubara, Joe Miyamoto, Attayeb Mohsen, Hiroshi Mori, Yuki Naito, Takeru Nakazato, Jeremy NguyenXuan, Kozo Nishida, Naoki Nishida, Hiroyo Nishide, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Benedict Paten, Jean-Luc Perret, Philip Prathipati, Pjotr Prins, Núria Queralt-Rosinach, Daisuke Shinmachi, Shinya Suzuki, Tsuyosi Tabata, Terue Takatsuki, Kieron R. Taylor, Mark Thompson, Ikuo Uchiyama, Bruno Vieira, Chih-Hsuan Wei, Mark D. Wilkinson, Issaku Yamada, Ryota Yamanaka, Kazutoshi Yoshitake, Akiyasu C. Yoshizawa, Michel Dumontier, Kenjiro Kosaki, Toshihisa Takagi:
BioHackathon 2015: Semantics of data for life sciences and reproducible research. F1000Research 9: 136 (2020) - 2018
- [i6]Tobias Kuhn, Albert Meroño-Peñuela, Alexander Malic, Jorrit H. Poelen, Allen H. Hurlbert, Emilio Centeno, Laura I. Furlong, Núria Queralt-Rosinach, Christine Chichester, Juan M. Banda, Egon L. Willighagen, Friederike Ehrhart, Chris T. A. Evelo, Tareq B. Malas, Michel Dumontier:
Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data. CoRR abs/1809.06532 (2018) - 2017
- [i5]Tobias Kuhn, Egon L. Willighagen, Chris T. A. Evelo, Núria Queralt-Rosinach, Emilio Centeno, Laura I. Furlong:
Reliable Granular References to Changing Linked Data. CoRR abs/1708.09193 (2017) - 2016
- [i4]Mona Alshahrani, Mohammad Asif Khan, Omar Maddouri, Akira R. Kinjo, Núria Queralt-Rosinach, Robert Hoehndorf:
Neuro-symbolic representation learning on biological knowledge graphs. CoRR abs/1612.04256 (2016) - [i3]Tobias Kuhn, Christine Chichester, Michael Krauthammer, Núria Queralt-Rosinach, Ruben Verborgh, George Giannakopoulos, Axel-Cyrille Ngonga Ngomo, Raffaele Viglianti, Michel Dumontier:
Decentralized provenance-aware publishing with nanopublications. PeerJ Prepr. 4: e1760 (2016) - 2015
- [i2]Gang Fu, Evan Bolton, Núria Queralt Rosinach, Laura Inés Furlong, Vinh Nguyen, Amit P. Sheth, Olivier Bodenreider, Michel Dumontier:
Exposing Provenance Metadata Using Different RDF Models. CoRR abs/1509.02822 (2015) - [i1]Vinh Nguyen, Olivier Bodenreider, Krishnaprasad Thirunarayan, Gang Fu, Evan Bolton, Núria Queralt Rosinach, Laura Inés Furlong, Michel Dumontier, Amit P. Sheth:
On Reasoning with RDF Statements about Statements using Singleton Property Triples. CoRR abs/1509.04513 (2015)
Coauthor Index
aka: Laura I. Furlong
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