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Boris Lenhard
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2020 – today
- 2023
[j24]Sarvesh Nikumbh
, Boris Lenhard
:
Identifying promoter sequence architectures via a chunking-based algorithm using non-negative matrix factorisation. PLoS Comput. Biol. 19(11) (2023)- 2022
[j23]Jaime Abraham Castro-Mondragón
, Rafael Riudavets Puig
, Ieva Rauluseviciute
, Roza Berhanu lemma
, Laura Turchi
, Romain Blanc-Mathieu
, Jeremy Lucas
, Paul Boddie, Aziz Khan
, Nicolás Manosalva Pérez
, Oriol Fornes
, Tiffany Y. Leung
, Alejandro Aguirre
, Fayrouz Hammal
, Daniel Schmelter, Damir Baranasic
, Benoît Ballester
, Albin Sandelin
, Boris Lenhard
, Klaas Vandepoele
, Wyeth W. Wasserman
, François Parcy
, Anthony Mathelier
:
JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles. Nucleic Acids Res. 50(D1): 165-173 (2022)- 2020
[j22]Oriol Fornes
, Jaime Abraham Castro-Mondragón
, Aziz Khan
, Robin van der Lee
, Xi Zhang
, Phillip Andrew Richmond
, Bhavi P. Modi
, Solenne Correard
, Marius Gheorghe
, Damir Baranasic
, Walter Santana-Garcia
, Ge Tan
, Jeanne Chèneby
, Benoît Ballester
, François Parcy, Albin Sandelin
, Boris Lenhard
, Wyeth W. Wasserman
, Anthony Mathelier
:
JASPAR 2020: update of the open-access database of transcription factor binding profiles. Nucleic Acids Res. 48(Database-Issue): D87-D92 (2020)
2010 – 2019
- 2019
[j21]Alexander J. Nash
, Boris Lenhard
:
A novel measure of non-coding genome conservation identifies genomic regulatory blocks within primates. Bioinform. 35(14): 2354-2361 (2019)
[j20]Ge Tan
, Dimitris Polychronopoulos
, Boris Lenhard
:
CNEr: A toolkit for exploring extreme noncoding conservation. PLoS Comput. Biol. 15(8) (2019)- 2018
[j19]Aziz Khan
, Oriol Fornes, Arnaud Stigliani, Marius Gheorghe, Jaime Abraham Castro-Mondragón, Robin van der Lee, Adrien Bessy, Jeanne Chèneby, Shubhada R. Kulkarni, Ge Tan, Damir Baranasic, David J. Arenillas, Albin Sandelin
, Klaas Vandepoele
, Boris Lenhard, Benoît Ballester
, Wyeth W. Wasserman
, François Parcy
, Anthony Mathelier
:
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Res. 46(Database-Issue): D1284 (2018)
[j18]Aziz Khan
, Oriol Fornes
, Arnaud Stigliani
, Marius Gheorghe, Jaime Abraham Castro-Mondragón
, Robin van der Lee
, Adrien Bessy, Jeanne Chèneby
, Shubhada R. Kulkarni
, Ge Tan
, Damir Baranasic
, David J. Arenillas, Albin Sandelin
, Klaas Vandepoele
, Boris Lenhard
, Benoît Ballester
, Wyeth W. Wasserman
, François Parcy
, Anthony Mathelier
:
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Res. 46(Database-Issue): D260-D266 (2018)- 2016
[j17]Ge Tan, Boris Lenhard
:
TFBSTools: an R/bioconductor package for transcription factor binding site analysis. Bioinform. 32(10): 1555-1556 (2016)
[j16]Anthony Mathelier
, Oriol Fornes
, David J. Arenillas, Chih-Yu Chen
, Grégoire Denay
, Jessica J. Y. Lee
, Wenqiang Shi, Casper Shyr, Ge Tan, Rebecca Worsley-Hunt, Allen W. Zhang, François Parcy
, Boris Lenhard
, Albin Sandelin
, Wyeth W. Wasserman
:
JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res. 44(Database-Issue): 110-115 (2016)- 2014
[j15]Anthony Mathelier
, Xiaobei Zhao, Allen W. Zhang, François Parcy
, Rebecca Worsley-Hunt, David J. Arenillas, Sorana Buchman, Chih-Yu Chen
, Alice Yi Chou, Hans Ienasescu, Jonathan S. Lim, Casper Shyr, Ge Tan
, Michelle Zhou, Boris Lenhard
, Albin Sandelin
, Wyeth W. Wasserman
:
JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic Acids Res. 42(Database-Issue): 142-147 (2014)
[j14]Vanja Haberle
, Nan Li, Yavor Hadzhiev
, Charles Plessy
, Christopher Previti, Chirag Nepal
, Jochen Gehrig
, Xianjun Dong
, Altuna Akalin
, Ana Maria Suzuki, Wilfred F. J. van IJcken
, Olivier Armant
, Marco Ferg, Uwe Strähle, Piero Carninci
, Ferenc Müller
, Boris Lenhard
:
Two independent transcription initiation codes overlap on vertebrate core promoters. Nat. 507(7492): 381-385 (2014)- 2013
[j13]Gemma B. Danks
, Coen Campsteijn, Mrutyunjaya Parida, Stephen Butcher, Harsha Doddapaneni, Bolei Fu, Raul Petrin, Raghu Metpally, Boris Lenhard
, Patrick Wincker, Daniel Chourrout, Eric M. Thompson, J. Robert Manak:
OikoBase: a genomics and developmental transcriptomics resource for the urochordate Oikopleura dioica. Nucleic Acids Res. 41(Database-Issue): 845-853 (2013)- 2010
[j12]Xianjun Dong
, Altuna Akalin
, Yogita Sharma
, Boris Lenhard
:
Translog, a web browser for studying the expression divergence of homologous genes. BMC Bioinform. 11(S-1): 59 (2010)
[j11]Elodie Portales-Casamar
, Supat Thongjuea
, Andrew T. Kwon
, David J. Arenillas, Xiaobei Zhao, Eivind Valen
, Dimas Yusuf, Boris Lenhard
, Wyeth W. Wasserman
, Albin Sandelin
:
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles. Nucleic Acids Res. 38(Database-Issue): 105-110 (2010)
2000 – 2009
- 2008
[j10]Jan Christian Bryne, Eivind Valen
, Man-Hung Eric Tang
, Troels Torben Marstrand
, Ole Winther
, Isabelle da Piedade, Anders Krogh
, Boris Lenhard
, Albin Sandelin
:
JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update. Nucleic Acids Res. 36(Database-Issue): 102-106 (2008)
[j9]Malin C. Andersen, Pär G. Engström
, Stuart Lithwick, David J. Arenillas, Per Eriksson
, Boris Lenhard
, Wyeth W. Wasserman
, Jacob Odeberg
:
In Silico Detection of Sequence Variations Modifying Transcriptional Regulation. PLoS Comput. Biol. 4(1) (2008)- 2007
[j8]Ken C. Pang
, Stuart Stephen, Marcel E. Dinger
, Pär G. Engström
, Boris Lenhard
, John S. Mattick
:
RNAdb 2.0 - an expanded database of mammalian non-coding RNAs. Nucleic Acids Res. 35(Database-Issue): 178-182 (2007)- 2006
[j7]Dominique Vlieghe, Albin Sandelin
, Pieter J. De Bleser, Kris Vleminckx, Wyeth W. Wasserman
, Frans van Roy, Boris Lenhard
:
A new generation of JASPAR, the open-access repository for transcription factor binding site profiles. Nucleic Acids Res. 34(Database-Issue): 95-97 (2006)- 2005
[j6]Ken C. Pang
, Stuart Stephen, Pär G. Engström
, Khairina Tajul-Arifin, Weisan Chen, Claes Wahlestedt, Boris Lenhard
, Yoshihide Hayashizaki, John S. Mattick
:
RNAdb - a comprehensive mammalian noncoding RNA database. Nucleic Acids Res. 33(Database-Issue): 125-130 (2005)- 2004
[j5]Albin Sandelin
, Wynand Alkema
, Pär G. Engström
, Wyeth W. Wasserman
, Boris Lenhard
:
JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic Acids Res. 32(Database-Issue): 91-94 (2004)
[j4]D. Fredman, G. Munns, Daniel Rios, F. Sjöholm, Marianne Siegfried, Boris Lenhard
, Heikki Lehväslaiho, Anthony J. Brookes:
HGVbase: a curated resource describing human DNA variation and phenotype relationships. Nucleic Acids Res. 32(Database-Issue): 516-519 (2004)
[j3]Albin Sandelin
, Wyeth W. Wasserman
, Boris Lenhard
:
ConSite: web-based prediction of regulatory elements using cross-species comparison. Nucleic Acids Res. 32(Web-Server-Issue): 249-252 (2004)
[j2]Johan Geijer, Boris Lenhard
, Roxana Merino-Martinez, Gunnar Norstedt, Amilcar Flores-Morales:
Grid Computing For The Analysis Of Regulatory Elements In Co-Regulated Sets Of Genes. Parallel Process. Lett. 14(2): 137-150 (2004)- 2002
[j1]Boris Lenhard
, Wyeth W. Wasserman
:
TFBS: Computational framework for transcription factor binding site analysis. Bioinform. 18(8): 1135-1136 (2002)
Coauthor Index

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last updated on 2025-11-22 04:58 CET by the dblp team
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