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Matthew H. Samore
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Journal Articles
- 2022
- [j22]Jorie M. Butler, Bryan Smith Gibson, Olga V. Patterson, Laura J. Damschroder, Corrinne H. Halls, Daniel W. Denhalter, Matthew H. Samore, Haojia Li, Yue Zhang, Scott L. DuVall:
Clinician documentation of patient centered care in the electronic health record. BMC Medical Informatics Decis. Mak. 22(1): 65 (2022) - 2019
- [j21]Frank A. Drews, Boaz A. Markewitz, Gregory J. Stoddard, Matthew H. Samore:
Interruptions and Delivery of Care in the Intensive Care Unit. Hum. Factors 61(4) (2019) - 2018
- [j20]Barbara Jones, Brett R. South, Y. Shao, C. C. Lu, Jianwei Leng, Brian C. Sauer, Adi V. Gundlapalli, Matthew H. Samore, Qiang Zeng:
Development and Validation of a Natural Language Processing Tool to Identify Patients Treated for Pneumonia across VA Emergency Departments. Appl. Clin. Inform. 09(01): 122-128 (2018) - 2016
- [j19]Guilherme Del Fiol, Jorie Butler, Yarden Livnat, Jeanmarie Mayer, Matthew H. Samore, Makoto Jones, Charlene R. Weir, Don Roosan:
Feasibility of population health analytics and data visualization for decision support in the infectious diseases domain. Appl. Clin. Inform. 07(02): 604-623 (2016) - [j18]Warren B. P. Pettey, Damon J. A. Toth, Andrew Redd, Marjorie E. Carter, Matthew H. Samore, Adi V. Gundlapalli:
Using network projections to explore co-incidence and context in large clinical datasets: Application to homelessness among U.S. Veterans. J. Biomed. Informatics 61: 203-213 (2016) - 2015
- [j17]Adi V. Gundlapalli, Doug Redd, Bryan Smith Gibson, Marjorie Carter, Chris Korhonen, Jonathan R. Nebeker, Matthew H. Samore, Qing Zeng-Treitler:
Maximizing clinical cohort size using free text queries. Comput. Biol. Medicine 60: 1-7 (2015) - [j16]Le-Thuy T. Tran, Guy Divita, Marjorie E. Carter, Joshua Judd, Matthew H. Samore, Adi V. Gundlapalli:
Exploiting the UMLS Metathesaurus for extracting and categorizing concepts representing signs and symptoms to anatomically related organ systems. J. Biomed. Informatics 58: 19-27 (2015) - [j15]Roosan Islam, Charlene R. Weir, Makoto Jones, Guilherme Del Fiol, Matthew H. Samore:
Understanding complex clinical reasoning in infectious diseases for improving clinical decision support design. BMC Medical Informatics Decis. Mak. 15: 101 (2015) - 2014
- [j14]Stéphane M. Meystre, Óscar Ferrández, F. Jeffrey Friedlin, Brett R. South, Shuying Shen, Matthew H. Samore:
Text de-identification for privacy protection: A study of its impact on clinical text information content. J. Biomed. Informatics 50: 142-150 (2014) - 2013
- [j13]Óscar Ferrández, Brett R. South, Shuying Shen, F. Jeffrey Friedlin, Matthew H. Samore, Stéphane M. Meystre:
BoB, a best-of-breed automated text de-identification system for VHA clinical documents. J. Am. Medical Informatics Assoc. 20(1): 77-83 (2013) - 2012
- [j12]Yarden Livnat, Theresa-Marie Rhyne, Matthew H. Samore:
Epinome: A Visual-Analytics Workbench for Epidemiology Data. IEEE Computer Graphics and Applications 32(2): 89-95 (2012) - [j11]Jennifer H. Garvin, Scott L. DuVall, Brett R. South, Bruce E. Bray, Daniel Bolton, Julia Heavirland, Steve Pickard, Paul Heidenreich, Shuying Shen, Charlene R. Weir, Matthew H. Samore, Mary K. Goldstein:
Automated extraction of ejection fraction for quality measurement using regular expressions in Unstructured Information Management Architecture (UIMA) for heart failure. J. Am. Medical Informatics Assoc. 19(5): 859-866 (2012) - [j10]Per H. Gesteland, Yarden Livnat, Nathan Galli, Matthew H. Samore, Adi V. Gundlapalli:
The EpiCanvas infectious disease weather map: an interactive visual exploration of temporal and spatial correlations. J. Am. Medical Informatics Assoc. 19(6): 954-959 (2012) - [j9]Makoto Jones, Scott L. DuVall, Joshua Spuhl, Matthew H. Samore, Christopher D. Nielson, Michael A. Rubin:
Identification of methicillin-resistant Staphylococcus aureus within the Nation's Veterans Affairs Medical Centers using natural language processing. BMC Medical Informatics Decis. Mak. 12: 34 (2012) - 2010
- [j8]Deepthi Rajeev, Catherine J. Staes, R. Scott Evans, Susan Mottice, Robert T. Rolfs, Matthew H. Samore, Jon Whitney, Richard Kurzban, Stanley M. Huff:
Application of information technology: Development of an electronic public health case report using HL7 v2.5 to meet public health needs. J. Am. Medical Informatics Assoc. 17(1): 34-41 (2010) - [j7]Deepthi Rajeev, Catherine J. Staes, R. Scott Evans, Susan Mottice, Robert T. Rolfs, Matthew H. Samore, Jon Whitney, Richard Kurzban, Stanley M. Huff:
Letter: In response to letter to the editor: 'Concerning SNOMED-CT content for public health case reports'. J. Am. Medical Informatics Assoc. 17(5): 613-614 (2010) - 2009
- [j6]Brett R. South, Shuying Shen, Makoto Jones, Jennifer H. Garvin, Matthew H. Samore, Wendy Webber Chapman, Adi V. Gundlapalli:
Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease. BMC Bioinform. 10(S-9): 12 (2009) - [j5]Catherine J. Staes, Wu Xu, Samuel D. LeFevre, Ronald C. Price, Scott P. Narus, Adi V. Gundlapalli, Robert T. Rolfs, Barry Nangle, Matthew H. Samore, Julio C. Facelli:
A case for using grid architecture for state public health informatics: the Utah perspective. BMC Medical Informatics Decis. Mak. 9: 32 (2009) - 2008
- [j4]R. Scott Evans, Carrie Jane Wallace, James F. Lloyd, Caroline W. Taylor, Rouett H. Abouzelof, Sharon Sumner, Kyle V. Johnson, Amyanne Wuthrich, Stephan Harbarth, Matthew H. Samore:
Application of Information Technology: Rapid Identification of Hospitalized Patients at High Risk for MRSA Carriage. J. Am. Medical Informatics Assoc. 15(4): 506-512 (2008) - 2006
- [j3]Michael A. Rubin, Kim Bateman, Sharon Donnelly, Gregory J. Stoddard, Kurt Stevenson, Reed M. Gardner, Matthew H. Samore:
Research Paper: Use of a Personal Digital Assistant for Managing Antibiotic Prescribing for Outpatient Respiratory Tract Infections in Rural Communities. J. Am. Medical Informatics Assoc. 13(6): 627-634 (2006) - 2005
- [j2]Nancy C. Nelson, R. Scott Evans, Matthew H. Samore, Reed M. Gardner:
Application of Information Technology: Detection and Prevention of Medication Errors Using Real-Time Bedside Nurse Charting. J. Am. Medical Informatics Assoc. 12(4): 390-397 (2005) - 2002
- [j1]Jonathan R. Nebeker, John F. Hurdle, Jennifer M. Hoffman, Beverly Roth, Charlene R. Weir, Matthew H. Samore:
Developing a Taxonomy for Research in Adverse Drug Events: Potholes and Signposts. J. Am. Medical Informatics Assoc. 9(Supplement): 80-85 (2002)
Conference and Workshop Papers
- 2023
- [c42]Alec B. Chapman, Kelly S. Peterson, Elizabeth Rutter, McKenna Nevers, Jian Ying, David C. Classen, Makoto Jones, Matthew H. Samore, Barbara Jones:
A Linguistic Analysis Examining the Impact of COVID-19 on Pneumonia Diagnosis and Disease Models. MedInfo 2023: 1444-1445 - 2021
- [c41]Jeffrey Humpherys, Ahmad Halwani, Barbara Jones, Makoto M. Jones, Matthew H. Samore, Sadiqa Mahmood, Dale Sanders:
Topic-to-Topic Modeling for COVID-19 Mortality. ICHI 2021: 258-264 - 2018
- [c40]Barbara Jones, Jason Carr, Sean J. Piad, Jesse Sutton, Stacey Slager, Peter Yarbrough, Emily Spivak, Adi V. Gundlapalli, Matthew H. Samore, Charlene R. Weir:
Timing is Everything: Information Sequencing in the Design of Computerized Decision Support for Pneumonia. AMIA 2018 - 2017
- [c39]Carl J. Grafe, Catherine J. Staes, Kensaku Kawamoto, Matthew H. Samore, R. Scott Evans:
State-level adoption of national guidelines for norovirus outbreaks in healthcare settings: implications for decision support. AMIA 2017 - [c38]Adi V. Gundlapalli, Audrey L. Jones, Andrew Redd, Ying Suo, Warren B. P. Pettey, April F. Mohanty, Emily Brignone, Lori Gawron, Megan Vanneman, Matthew H. Samore, Jamison D. Fargo:
Characteristics of the Highest Users of Emergency Services in Veterans Affairs Hospitals: Homeless and Non-Homeless. ICIMTH 2017: 24-27 - [c37]Adi V. Gundlapalli, Emily Brignone, Guy Divita, Audrey L. Jones, Andrew Redd, Ying Suo, Warren B. P. Pettey, April F. Mohanty, Lori Gawron, Rebecca Blais, Matthew H. Samore, Jamison D. Fargo:
Using Structured and Unstructured Data to Refine Estimates of Military Sexual Trauma Status Among US Military Veterans. ICIMTH 2017: 128-131 - [c36]Andrew M. Redd, Adi V. Gundlapalli, Guy Divita, Le-Thuy T. Tran, Warren B. P. Pettey, Matthew H. Samore:
Comparison of Grouping Methods for Template Extraction from VA Medical Record Text. ICIMTH 2017: 136-139 - [c35]Guy Divita, Emily Brignone, Marjorie E. Carter, Ying Suo, Rebecca K. Blais, Matthew H. Samore, Jamison D. Fargo, Adi V. Gundlapalli:
Extracting Sexual Trauma Mentions from Electronic Medical Notes Using Natural Language Processing. MedInfo 2017: 351-355 - [c34]Guy Divita, Gang Luo, Le-Thuy T. Tran, Terri Elizabeth Workman, Adi V. Gundlapalli, Matthew H. Samore:
General Symptom Extraction from VA Electronic Medical Notes. MedInfo 2017: 356-360 - 2016
- [c33]Don Roosan, Matthew H. Samore, Makoto Jones, Yarden Livnat, Justin Clutter:
Big-Data Based Decision-Support Systems to Improve Clinicians' Cognition. ICHI 2016: 285-288 - [c32]Guy Divita, Terri Elizabeth Workman, Marjorie E. Carter, Andrew Redd, Matthew H. Samore, Adi V. Gundlapalli:
PlateRunner: A Search Engine to Identify EMR Boilerplates. ICIMTH 2016: 33-36 - [c31]Marjorie E. Carter, Guy Divita, Andrew Redd, Michael A. Rubin, Matthew H. Samore, Kalpana Gupta, Barbara W. Trautner, Adi V. Gundlapalli:
Finding 'Evidence of Absence' in Medical Notes: Using NLP for Clinical Inferencing. ICIMTH 2016: 79-82 - 2015
- [c30]Andrew Redd, Guy Divita, Adi V. Gundlapalli, Le-Thuy T. Tran, Matthew H. Samore:
Novel Template Identification from VA Text Integration Utility Notes. AMIA 2015 - [c29]Le-Thuy T. Tran, Guy Divita, Andrew Redd, Marjorie E. Carter, Matthew H. Samore, Adi V. Gundlapalli:
Scaling Out and Evaluation of OBSecAn, an Automated Section Annotator for Semi-Structured Clinical Documents, on a Large VA Clinical Corpus. AMIA 2015 - [c28]Adi V. Gundlapalli, Guy Divita, Marjorie E. Carter, Andrew Redd, Matthew H. Samore, Kalpana Gupta, Barbara W. Trautner:
Taming Big Data: An Information Extraction Strategy for Large Clinical Text Corpora. ICIMTH 2015: 175-178 - [c27]Guy Divita, Marjorie E. Carter, Begum Durgahee, Warren E. Pettey, Andrew Redd, Matthew H. Samore, Adi V. Gundlapalli:
Nora: A Vocabulary Discovery Tool for Concept Extraction. ICIMTH 2015: 179-182 - 2014
- [c26]Guy Divita, Qing T. Zeng, Adi V. Gundlapalli, Scott L. DuVall, Jonathan R. Nebeker, Matthew H. Samore:
Sophia: An Expedient UMLS Concept Extraction Annotator. AMIA 2014 - [c25]Adi V. Gundlapalli, Marjorie E. Carter, Guy Divita, Shuying Shen, Miland N. Palmer, Brett R. South, Begum Durgahee, Matthew H. Samore:
Extracting Concepts Related to a Homelessness from the Free Text of VA Electronic Medical Records. AMIA 2014 - [c24]Charlene R. Weir, Bryan Smith Gibson, Alan H. Morris, Jorie Butler, Matthew H. Samore, Jonathan R. Nebeker:
Considerations of Dual Process Theories for EHR Design. AMIA 2014 - [c23]Guy Divita, Shuying Shen, Marjorie Carter, Andrew Redd, Tyler Forbush, Miland N. Palmer, Matthew H. Samore, Adi V. Gundlapalli:
Recognizing Questions and Answers in EMR Templates Using Natural Language Processing. ICIMTH 2014: 149-152 - [c22]Andrew Redd, Marjorie Carter, Guy Divita, Shuying Shen, Miland N. Palmer, Matthew H. Samore, Adi V. Gundlapalli:
Detecting Earlier Indicators of Homelessness in the Free Text of Medical Records. ICIMTH 2014: 153-156 - [c21]Adi V. Gundlapalli, Andrew Redd, Marjorie Carter, Miland N. Palmer, Rachel Peterson, Matthew H. Samore:
Exploring Patterns in Resource Utilization Prior to the Formal Identification of Homelessness in Recently Returned Veterans. ICIMTH 2014: 265-268 - 2013
- [c20]Jorie Butler, Marjorie Carter, Candace Hayden, Bryan Smith Gibson, Charlene R. Weir, Laverne A. Snow, José R. Morales, Anne Smith, Kim Bateman, Adi V. Gundlapalli, Matthew H. Samore:
Understanding Adoption of a Personal Health Record in Rural Health Care Clinics: Revealing Barriers and Facilitators of Adoption including Attributions about Potential Patient Portal Users and Self-reported Characteristics of Early Adopting Users. AMIA 2013 - [c19]Adi V. Gundlapalli, Marjorie Carter, Miland N. Palmer, Thomas Ginter, Andrew Redd, Steve Pickard, Shuying Shen, Brett R. South, Guy Divita, Scott L. DuVall, Thien M. Nguyen, Leonard W. D'Avolio, Matthew H. Samore:
Using Natural Language Processing on the Free Text of Clinical Documents to Screen for Evidence of Homelessness Among US Veterans. AMIA 2013 - [c18]Kristina Doing-Harris, Stéphane M. Meystre, Matthew H. Samore, Werner Ceusters:
Applying Ontological Realism to Medically Unexplained Syndromes. MedInfo 2013: 97-101 - 2012
- [c17]Kristina Doing-Harris, Stéphane M. Meystre, Matthew H. Samore, Werner Ceusters:
Domain and Application Ontologies for Medically Unexplained Syndromes. AMIA 2012 - [c16]Óscar Ferrández, Brett R. South, Shuying Shen, F. Jeffrey Friedlin, Matthew H. Samore, Stéphane M. Meystre:
Generalizability and Comparison of Automatic Clinical Text De-Identification Methods and Resources. AMIA 2012 - [c15]Neil Nokes, Stéphane M. Meystre, Brett R. South, Jeffrey Scehnet, Shuying Shen, Óscar Ferrández, F. Jeffrey Friedlin, Matthew Maw, Matthew H. Samore:
A Survey of VHA Privacy Officers for the External Use of Automatically De-Identified Clinical Documents. AMIA 2012 - 2011
- [c14]Scott L. DuVall, Keith W. Boone, Adi V. Gundlapalli, Brett R. South, Shuying Shen, Jonathan R. Nebeker, Leonard W. D'Avolio, Matthew H. Samore:
Creating Reusable Annotated Corpora with the Clinical Document Architecture. HICSS 2011: 1-10 - 2009
- [c13]Adi V. Gundlapalli, Xiulian Ma, Jose Benuzillo, Warren B. P. Pettey, Richard Greenberg, Joseph Hales, Molly Leecaster, Matthew H. Samore:
Social Network Analyses of Patient-Healthcare Worker Interactions: Implications for Disease Transmission. AMIA 2009 - [c12]Jeanmarie Mayer, Shuying Shen, Brett R. South, Stéphane M. Meystre, F. Jeff Friedlin, William R. Ray, Matthew H. Samore:
Inductive Creation of an Annotation Schema and a Reference Standard for De-identification of VA Electronic Clinical Notes. AMIA 2009 - [c11]Amanda L. Parks, Brett Walker, Warren B. P. Pettey, Jose Benuzillo, Per H. Gesteland, Juliana Grant, James Koopman, Frank Drews, Matthew H. Samore:
Interactive Agent Based Modeling of Public Health Decision-Making. AMIA 2009 - 2008
- [c10]Per H. Gesteland, Mandy A. Allison, Catherine J. Staes, Matthew H. Samore, Michael A. Rubin, Marjorie Carter, Amyanne Wuthrich, Anita Y. Kinney, Susan Mottice, Carrie L. Byington:
Clinician Use and Acceptance of Population-Based Data about Respiratory Pathogens: Implications for Enhancing Population-Based Clinical Practice. AMIA 2008 - [c9]Michael A. Rubin, Jeanmarie Mayer, Tom Greene, Brian C. Sauer, Bala Hota, William E. Trick, John A. Jernigan, Matthew H. Samore:
An Agent-Based Model for Evaluating Surveillance Methods for Catheter-Related Bloodstream Infection. AMIA 2008 - [c8]Brett R. South, Wendy W. Chapman, Sylvain Delisle, Shuying Shen, Ericka Kalp, Trish Perl, Matthew H. Samore, Adi V. Gundlapalli:
Optimizing A Syndromic Surveillance Text Classifier for Influenza-like Illness: Does Document Source Matter? AMIA 2008 - 2007
- [c7]Per H. Gesteland, Matthew H. Samore, Andrew T. Pavia, Rajendu Srivastava, Kent Korgenski, Kristine Gerber, Judy A. Daly, Michael B. Mundorff, Robert T. Rolfs, Brent C. James, Carrie L. Byington:
Informing the Front Line about Common Respiratory Viral Epidemics. AMIA 2007 - [c6]Adi V. Gundlapalli, Hongying Tang, Claude Tonnierre, Gregory J. Stoddard, Robert T. Rolfs, R. Scott Evans, Matthew H. Samore:
Validity of Electronic Medical Record-based Rules For the Early Detection of Meningitis and Encephalitis. AMIA 2007 - 2004
- [c5]R. Scott Evans, James F. Lloyd, Rouett H. Abouzelof, Caroline W. Taylor, Vickie R. Anderson, Matthew H. Samore:
System-wide Surveillance for Clinical Encounters by Patients Previously Identified with MRSA and VRE. MedInfo 2004: 212-216 - 2002
- [c4]Adi V. Gundlapalli, Jonathan Olson, Sean P. Smith, Michael Baza, Robert R. Hausam, Louise J. Eutropius, Stanley L. Pestotnik, Karen Duncan, Nancy Staggers, Pierre Pincetl, Matthew H. Samore:
A Rule-based Computer System to Facilitate Public Health Surveillance during the 2002 Olympic Winter Games. AMIA 2002 - 2001
- [c3]Jonathan R. Nebeker, John F. Hurdle, Jennifer M. Hoffman, Beverly Roth, Charlene R. Weir, Matthew H. Samore:
Developing a taxonomy for research in adverse drug events: potholes and signposts. AMIA 2001 - 1997
- [c2]David P. Delaney, Joseph D. Zibrak, Matthew H. Samore, Mark Peterson:
Use of relational database management system by clinicians to create automated MICU progress note from existent data sources. AMIA 1997 - [c1]Matthew H. Samore, Deborah Lichtenberg, Lisa Saubermann, Catherine Kawachi, Yehuda Carmeli:
A clinical data repository enhances hospital infection control. AMIA 1997
Informal and Other Publications
- 2023
- [i1]Marc Lipsitch, Mary T. Bassett, John S. Brownstein, Paul Elliott, David Eyre, M. Kate Grabowski, James A. Hay, Michael A. Johansson, Stephen M. Kissler, Daniel B. Larremore, Jennifer Layden, Justin Lessler, Ruth Lynfield, Duncan MacCannell, Lawrence C. Madoff, C. Jessica E. Metcalf, Lauren Ancel Meyers, Sylvia K. Ofori, Celia Quinn, Ana I. Ramos Bento, Nick Reich, Steven Riley, Roni Rosenfeld, Matthew H. Samore, Rangarajan Sampath, Rachel B. Slayton, David L. Swerdlow, Shaun Truelove, Jay K. Varma, Yonatan H. Grad:
Infectious disease surveillance needs for the United States: lessons from COVID-19. CoRR abs/2311.13724 (2023)
Coauthor Index
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