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Wendy W. Chapman
Wendy Webber Chapman
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- affiliation: University of Utah, Department of Biomedical Informatics
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2020 – today
- 2023
- [j49]Tamara Vagg, Kevin F. Deasy, Wendy W. Chapman, Sarath C. Ranganathan, Barry J. Plant, Shivanthan Shanthikumar:
Virtual monitoring in CF - the importance of continuous monitoring in a multi-organ chronic condition. Frontiers Digit. Health 5 (2023) - [j48]Christopher McMaster
, Julia Chan, David F. L. Liew
, Elizabeth Su
, Albert G. Frauman, Wendy W. Chapman, Douglas E. V. Pires
:
Developing a deep learning natural language processing algorithm for automated reporting of adverse drug reactions. J. Biomed. Informatics 137: 104265 (2023) - 2022
- [j47]Dawn Choo, Sathana Dushyanthen
, Kathleen Gray, Daniel Capurro
, Mark Merolli, Brian E. Chapman, Douglas Pires, Graeme K. Hart, Kit Huckvale, Wendy W. Chapman, Kayley M. Lyons:
Designing a professional development online short course to foster Learning Healthcare Systems. Int. J. Medical Informatics 158(February): 104666 (2022) - [c90]Kit Huckvale, Wendy W. Chapman, Daniel Capurro:
The Validitron Sandbox: a cloud environment to support prototyping, workflow design and integration testing of data-focused digital health applications. AMIA 2022 - 2021
- [j46]Adela Grando
, Jessica S. Ancker
, Donghua Tao, Rachael Howe, Clare Coonan, Merida L. Johns, Wendy W. Chapman:
Design and evaluation of a Women in American Medical Informatics Association (AMIA) leadership program. J. Am. Medical Informatics Assoc. 29(1): 163-170 (2021) - [j45]Ruth M. Reeves
, Lee M. Christensen
, Jeremiah R. Brown
, Michael Conway, Maxwell Levis
, Glenn T. Gobbel
, Rashmee U. Shah, Christine Goodrich, Iben Ricket, Freneka F. Minter
, Andrew Bohm, Bruce E. Bray
, Michael E. Matheny, Wendy W. Chapman:
Adaptation of an NLP system to a new healthcare environment to identify social determinants of health. J. Biomed. Informatics 120: 103851 (2021) - [c89]Jia-Wen Guo, Katherine A. Sward, Ann M. Lyons, Susan L. Beck, Gary W. Donaldson, Wendy W. Chapman, Lewis J. Frey:
Impact of Comorbidity Profiles on Pain Trajectories in Breast Cancer Patients by Using Electronic Health Record Data. AMIA 2021 - 2020
- [c88]Wendy W. Chapman, Adela Grando, Merida L. Johns, Guergana Savova, Maia Hightower:
Training Women for Leadership in Informatics and Digital Health: A Report from the Inaugural Women in AMIA Leadership Program. AMIA 2020 - [c87]Jia-Wen Guo, Christina L. Radloff, Katherine A. Sward, Susan L. Beck, Wendy W. Chapman, Gary W. Donaldson, Lewis J. Frey:
A Corpus Analysis of Social Isolation from Clinical Notes of Patients with Cancer. AMIA 2020
2010 – 2019
- 2019
- [j44]Gaurav Trivedi
, Esmaeel R. Dadashzadeh, Robert M. Handzel
, Wendy W. Chapman, Shyam Visweswaran, Harry Hochheiser:
Interactive NLP in Clinical Care: Identifying Incidental Findings in Radiology Reports. Appl. Clin. Inform. 10(04): 655-669 (2019) - [j43]Mike Conway
, Salomeh Keyhani, Lee M. Christensen, Brett R. South, Marzieh Vali, Louise C. Walter, Danielle L. Mowery, Samir E. AbdelRahman, Wendy W. Chapman:
Moonstone: a novel natural language processing system for inferring social risk from clinical narratives. J. Biomed. Semant. 10(1): 6:1-6:10 (2019) - [j42]Uwe Aickelin
, Wendy W. Chapman, Graeme K. Hart:
Health Informatics - Ambitions and Purpose. Frontiers Digit. Health 1: 2 (2019) - [c86]Brian T. Bucher, Jianlin Shi, Robert J. Pettit, Jeffrey P. Ferraro, Wendy W. Chapman, Adi V. Gundlapalli:
Determination of Marital Status of Patients from Structured and Unstructured Electronic Healthcare Data. AMIA 2019 - [c85]Jia-Wen Guo, Christina L. Radloff, Susan L. Beck, Gary W. Donaldson, Wendy W. Chapman, Katherine A. Sward, Lewis J. Frey:
Researchers' Perspectives on Symptoms related to Cancer Pain: A Network Analysis of Literatures. AMIA 2019 - [c84]Jianlin Shi, Kensaku Kawamoto, Wendy Kohlmann, Danielle L. Mowery, Richard L. Bradshaw, Subhadeep Deep, Wendy W. Chapman, Guilherme Del Fiol:
Extracting Disease Onset from Family History Comments in the Electronic Health Record using Fast Healthcare Interoperability Resources. AMIA 2019 - [c83]Jianlin Shi, Siru Liu, Liese C. Pruitt, Carolyn Luppens, Jeffrey P. Ferraro, Adi V. Gundlapalli, Wendy W. Chapman, Brian T. Bucher:
Using Natural Language Processing to improve EHR Structured Data-based Surgical Site Infection Surveillance. AMIA 2019 - 2018
- [j41]Gaurav Trivedi, Phuong Pham, Wendy W. Chapman, Rebecca Hwa
, Janyce Wiebe, Harry Hochheiser:
NLPReViz: an interactive tool for natural language processing on clinical text. J. Am. Medical Informatics Assoc. 25(1): 81-87 (2018) - [j40]Sumithra Velupillai
, Hanna Suominen
, Maria Liakata, Angus Roberts
, Anoop D. Shah
, Katherine Morley
, David Osborn
, Joseph Hayes, Robert Stewart, Johnny Downs
, Wendy W. Chapman, Rina Dutta
:
Using clinical Natural Language Processing for health outcomes research: Overview and actionable suggestions for future advances. J. Biomed. Informatics 88: 11-19 (2018) - [c82]Rebecca Crowley Jacobson, Wendy W. Chapman, Hongfang Liu, Olga V. Patterson, Daniel S. Zisook:
Natural Language Processing at Scale - Perspectives from Five Healthcare Organizations. AMIA 2018 - [c81]Siru Liu, Jeffrey P. Ferraro, Adi V. Gundlapalli, Wendy W. Chapman, Brian T. Bucher:
Detection of Healthcare-Associated Infections Using Electronic Health Record Data. AMIA 2018 - [c80]Danielle L. Mowery, Luke Martin, Brett R. South, Ellen Morrow, William Peche, Eric Wiesner, Wendy W. Chapman, Benjamin S. Brooke:
Detecting Current Episodes of Cholecystitis-related Pain from Veterans Affairs Clinical Notes using Natural Language Processing. AMIA 2018 - [c79]Ruth M. Reeves, Brett R. South, Glenn T. Gobbel, Lee M. Christensen, Paul Thompson, Wendy W. Chapman, Michael E. Matheny, Jeremiah R. Brown:
Annotating Social Determinants of Health and Functional Status Information Using Publicly Accessible Corpora. AMIA 2018 - [c78]Gaurav Trivedi, Robert M. Handzel
, Shyam Visweswaran, Wendy W. Chapman, Harry Hochheiser:
An Interactive NLP Tool for Signout Note Preparation. ICHI 2018: 426-428 - 2017
- [c77]Wendy W. Chapman, Murielle S. Beene, Omolola Ogunyemi, Genevieve B. Melton, Laura K. Wiley:
"My work will surely speak for itself: " Visibility, Networking, and Self Promotion in Informatics. AMIA 2017 - [c76]Alec B. Chapman, Danielle L. Mowery, Douglas S. Swords, Wendy W. Chapman, Brian T. Bucher:
Detecting Evidence of Intra-abdominal Surgical Site Infections from Radiology Reports Using Natural Language Processing. AMIA 2017 - [c75]Danielle L. Mowery, Brent D. Hill, Mingyuan Zhang, Wendy W. Chapman, Lisa A. Cannon-Albright, Jennifer Majersik:
A Comparison of Stroke Classifiers Leveraging Hospital Billing Codes versus Natural Language Processing. AMIA 2017 - [c74]Brian T. Bucher, Danielle L. Mowery, Melissa Castine, Wendy W. Chapman:
Towards Automatic Detection of Surgical Site Infections. CRI 2017 - [c73]Elizabeth Cary, Aaron M. Secrest, Chrissy Daniels, Wendy W. Chapman, Mike Conway, Danielle L. Mowery:
Classifying Sentiment of Free-Text Comments in Patient Satisfaction Surveys. CRI 2017 - [c72]Danielle L. Mowery, Melissa Castine, Erin Madden, Salomeh Keyhani, Wendy W. Chapman:
Developing and Assessing the Complexity of a Knowledge Base for Extracting Indications from Carotid Ultrasounds for the Veterans Health Administration. CRI 2017 - [c71]Brett R. South, Lee M. Christensen, Danielle L. Mowery, Melissa Castine, Marzieh Vali, Marjorie Carter, Mike Conway, Adi V. Gundlapalli, Wendy W. Chapman, Salomeh Keyhani:
Automatic Extraction of Social Determinants of Health from Veterans Affairs Clinical Documents using Natural Language Processing. CRI 2017 - [c70]Jianlin Shi, Danielle L. Mowery, Mingyuan Zhang, Jessica Sanders, Wendy W. Chapman, Lori Gawron
:
Extracting Intrauterine Device Usage from Clinical Texts Using Natural Language Processing. ICHI 2017: 568-571 - [i1]Gaurav Trivedi, Phuong Pham, Wendy W. Chapman, Rebecca Hwa, Janyce Wiebe, Harry Hochheiser:
An Interactive Tool for Natural Language Processing on Clinical Text. CoRR abs/1707.01890 (2017) - 2016
- [j39]Mike Conway, Artem Khojoyan, Fariba Fana, William Scuba, Melissa Castine, Danielle L. Mowery, Wendy W. Chapman, Simon Jupp
:
Developing a web-based SKOS editor. J. Biomed. Semant. 7: 5 (2016) - [j38]Danielle L. Mowery, Brian E. Chapman, Mike Conway, Brett R. South, Erin Madden, Salomeh Keyhani, Wendy W. Chapman:
Extracting a stroke phenotype risk factor from Veteran Health Administration clinical reports: an information content analysis. J. Biomed. Semant. 7: 26 (2016) - [j37]William Scuba, Melissa Tharp, Danielle L. Mowery, Eugene Tseytlin, Yang Liu, Frank A. Drews, Wendy W. Chapman:
Knowledge Author: facilitating user-driven, domain content development to support clinical information extraction. J. Biomed. Semant. 7: 42 (2016) - [j36]Danielle L. Mowery, Brett R. South, Lee M. Christensen, Jianwei Leng, Laura-Maria Peltonen
, Sanna Salanterä
, Hanna Suominen
, David Martínez
, Sumithra Velupillai
, Noémie Elhadad, Guergana Savova, Sameer Pradhan, Wendy W. Chapman:
Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2. J. Biomed. Semant. 7: 43 (2016) - [c69]Kristina Doing-Harris, Danielle L. Mowery, Chrissy Daniels, Wendy W. Chapman, Mike Conway:
Understanding patient satisfaction with received healthcare services: A natural language processing approach. AMIA 2016 - [c68]Thomas Ginter, Lalindra De Silva, Olga V. Patterson, William Scuba, Wendy W. Chapman, Scott L. DuVall:
VIP: A Framework for Mining Clinical Concepts Using Knowledge Author Ontologies and Apache UIMA. AMIA 2016 - [c67]Rebecca Jacobson, Suzanne Bakken, Wendy W. Chapman, Valerie Florance, Jessica D. Tenenbaum:
Women in Informatics Leadership Forum. AMIA 2016 - [c66]Danielle L. Mowery, Kristina M. Doing-Harris, Wendy W. Chapman, Chrissy Daniels, Mike Conway:
A Characterization of Emotional Valence to Support Review of Free-Text Press-Ganey Patient Satisfaction Survey Responses. AMIA 2016 - [c65]Ruth M. Reeves, Marcus Verhagen, Cynthia Brandt, Wendy W. Chapman, Michael E. Matheny, Steven H. Brown, Brian Marx, Theodore Speroff:
Event Coreference in Support of Temporal Reasoning in Mental Health Notes. AMIA 2016 - [c64]Brian E. Chapman, Danielle L. Mowery, Evan Narasimhan, Neel Patel, Wendy W. Chapman, Marta E. Heilbrun:
Assessing the Feasibility of an Automated Suggestion System for Communicating Critical Findings from Chest Radiology Reports to Referring Physicians. BioNLP@ACL 2016: 181-185 - 2015
- [j35]Sameer Pradhan, Noémie Elhadad, Brett R. South, David Martínez
, Lee M. Christensen, Amy Vogel, Hanna Suominen
, Wendy W. Chapman, Guergana Savova:
Evaluating the state of the art in disorder recognition and normalization of the clinical narrative. J. Am. Medical Informatics Assoc. 22(1): 143-154 (2015) - [c63]Glenn T. Gobbel, Ruth M. Reeves, Brett R. South, Wendy W. Chapman, Jay Jarman, Steven Lay, Michael E. Matheny:
RapTAT: A Tool for Assisted Annotation and Reviewer Training via Online Machine Learning. AMIA 2015 - [c62]Ruth M. Reeves, Wendy W. Chapman, Dezon Finch, Jennifer H. Garvin, Glenn T. Gobbel:
Developing Natural Language Processing Systems for Healthcare. AMIA 2015 - [c61]Brett R. South, Danielle L. Mowery, Lee M. Christensen, Adi V. Gundlapalli, Melissa Tharp, Marzieh Vali, Marjorie E. Carter, Mike Conway, Salomeh Keyhani, Wendy W. Chapman:
Annotating ADLs and IADLs in Veterans Affairs Clinical Documents. AMIA 2015 - [c60]Sumithra Velupillai, Danielle L. Mowery, Samir E. AbdelRahman, Lee M. Christensen, Wendy W. Chapman:
Towards a Generalizable Time Expression Model for Temporal Reasoning in Clinical Notes. AMIA 2015 - [c59]Noémie Elhadad, Sameer Pradhan, Sharon Lipsky Gorman, Suresh Manandhar, Wendy W. Chapman, Guergana K. Savova:
SemEval-2015 Task 14: Analysis of Clinical Text. SemEval@NAACL-HLT 2015: 303-310 - [c58]Sumithra Velupillai, Danielle L. Mowery, Samir E. AbdelRahman, Lee M. Christensen, Wendy W. Chapman:
BluLab: Temporal Information Extraction for the 2015 Clinical TempEval Challenge. SemEval@NAACL-HLT 2015: 815-819 - 2014
- [j34]Sumithra Velupillai
, Maria Skeppstedt, Maria Kvist
, Danielle L. Mowery, Brian E. Chapman, Hercules Dalianis, Wendy W. Chapman:
Cue-based assertion classification for Swedish clinical text - Developing a lexicon for pyConTextSwe. Artif. Intell. Medicine 61(3): 137-144 (2014) - [j33]Brett R. South, Danielle L. Mowery, Ying Suo, Jianwei Leng, Óscar Ferrández, Stéphane M. Meystre, Wendy W. Chapman:
Evaluating the effects of machine pre-annotation and an interactive annotation interface on manual de-identification of clinical text. J. Biomed. Informatics 50: 162-172 (2014) - [c57]Danielle L. Mowery, Daniel Franc, Shazia Ashfaq, Eric Cheng, Tania Zamora, Wendy W. Chapman, Brian E. Chapman:
Developing a Knowledge Base for Detecting Carotid Stenosis with pyConText. AMIA 2014 - [c56]Brett R. South, Danielle L. Mowery, Chris Leng, Stéphane M. Meystre, Wendy W. Chapman:
A System Usability Study Assessing a Machine-Assisted Interactive Interface to Support Annotation of Protected Health Information in Clinical Texts. AMIA 2014 - [c55]Sumithra Velupillai, Danielle L. Mowery, Lee M. Christensen, Noemie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman:
Disease/Disorder Semantic Template Filling - Information Extraction Challenge in the ShARe/CLEF eHealth Evaluation Lab 2014. AMIA 2014 - [c54]Danielle L. Mowery, Mindy K. Ross, Sumithra Velupillai, Stéphane M. Meystre, Janyce Wiebe, Wendy W. Chapman:
Generating Patient Problem Lists from the ShARe Corpus using SNOMED CT/SNOMED CT CORE Problem List. BioNLP@ACL 2014: 54-58 - [c53]Danielle L. Mowery, Sumithra Velupillai, Brett R. South, Lee M. Christensen, David Martínez, Liadh Kelly, Lorraine Goeuriot, Noémie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman:
Task 2: ShARe/CLEF eHealth Evaluation Lab 2014. CLEF (Working Notes) 2014: 31-42 - [c52]Liadh Kelly, Lorraine Goeuriot, Hanna Suominen
, Tobias Schreck, Gondy Leroy, Danielle L. Mowery, Sumithra Velupillai
, Wendy W. Chapman, David Martínez
, Guido Zuccon
, João R. M. Palotti:
Overview of the ShARe/CLEF eHealth Evaluation Lab 2014. CLEF 2014: 172-191 - [c51]Sameer Pradhan, Noémie Elhadad, Wendy W. Chapman, Suresh Manandhar, Guergana Savova:
SemEval-2014 Task 7: Analysis of Clinical Text. SemEval@COLING 2014: 54-62 - 2013
- [j32]Stephen T. Wu, Vinod Kaggal, Dmitriy Dligach, James J. Masanz
, Pei J. Chen, Lee Becker, Wendy Webber Chapman, Guergana K. Savova, Hongfang Liu, Christopher G. Chute:
A common type system for clinical natural language processing. J. Biomed. Semant. 4: 1 (2013) - [j31]Jeffrey P. Ferraro, Hal Daumé III, Scott L. DuVall
, Wendy Webber Chapman, Henk Harkema, Peter J. Haug:
Improving performance of natural language processing part-of-speech tagging on clinical narratives through domain adaptation. J. Am. Medical Informatics Assoc. 20(5): 931-939 (2013) - [j30]Mike Conway, John N. Dowling, Wendy Webber Chapman
:
Using chief complaints for syndromic surveillance: A review of chief complaint based classifiers in North America. J. Biomed. Informatics 46(4): 734-743 (2013) - [c50]Aron Henriksson, Mike Conway, Martin Duneld, Wendy Webber Chapman:
Identifying Synonymy between SNOMED Clinical Terms of Varying Length Using Distributional Analysis of Electronic Health Records. AMIA 2013 - [c49]Yan Jiao, Wei Wei, Wendy W. Chapman:
An Information Extraction Based Search System for Clinical Records. AMIA 2013 - [c48]Yang Liu, Melissa Tharp, Matthew Hong, Harry Hochheiser, Wendy W. Chapman:
Schema Builder: A Web-based User Interface for Authoring and Sharing Natural-Language Processing Schemas. AMIA 2013 - [c47]Danielle L. Mowery, Pamela W. Jordan, Janyce Wiebe, Henk Harkema, Wendy W. Chapman:
Semantic Annotation of Clinical Events for Generating a Problem List. AMIA 2013 - [c46]Danielle L. Mowery, Brett R. South, Jianwei Leng, Laura-Maria Murtola, Riitta Danielsson-Ojala, Sanna Salanterä, Wendy W. Chapman:
Creating a Reference Standard of Acronym and Abbreviation Annotations for the ShARe/CLEF eHealth Challenge 2013. AMIA 2013 - [c45]Guergana Savova, Wendy Webber Chapman, Noemie Elhadad, Martha Palmer:
Panel: Shared Resources, Shared Code, and Shared Activities in Clinical Natural Language Processing. AMIA 2013 - [c44]Wei Wei, Yan Jiao, Wendy W. Chapman:
Knowledge Representation for Topic Model Based Discharge Summary Clustering. AMIA 2013 - [c43]Danielle L. Mowery, Brett R. South, Lee M. Christensen, Laura-Maria Murtola, Sanna Salanterä, Hanna Suominen, David Martínez, Noémie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman:
Task 2: ShARe/CLEF eHealth Evaluation Lab 2013. CLEF (Working Notes) 2013 - [c42]Sameer Pradhan, Noémie Elhadad, Brett R. South, David Martínez, Lee M. Christensen, Amy Vogel, Hanna Suominen, Wendy W. Chapman, Guergana K. Savova:
Task 1: ShARe/CLEF eHealth Evaluation Lab 2013. CLEF (Working Notes) 2013 - [c41]Hanna Suominen
, Sanna Salanterä
, Sumithra Velupillai, Wendy Webber Chapman, Guergana K. Savova, Noemie Elhadad, Sameer Pradhan, Brett R. South, Danielle L. Mowery, Gareth J. F. Jones
, Johannes Leveling
, Liadh Kelly, Lorraine Goeuriot, David Martínez
, Guido Zuccon
:
Overview of the ShARe/CLEF eHealth Evaluation Lab 2013. CLEF 2013: 212-231 - [c40]Wendy Webber Chapman, Dieter Hillert, Sumithra Velupillai, Maria Kvist, Maria Skeppstedt, Brian E. Chapman, Mike Conway, Melissa Tharp, Danielle L. Mowery, Louise Deléger:
Extending the NegEx Lexicon for Multiple Languages. MedInfo 2013: 677-681 - 2012
- [j29]Lucila Ohno-Machado
, Vineet Bafna
, Aziz A. Boxwala, Brian E. Chapman, Wendy Webber Chapman
, Kamalika Chaudhuri, Michele E. Day, Claudiu Farcas, Nathaniel D. Heintzman, Xiaoqian Jiang, Hyeoneui Kim
, Jihoon Kim, Michael E. Matheny
, Frederic S. Resnic, Staal A. Vinterbo:
iDASH: integrating data for analysis, anonymization, and sharing. J. Am. Medical Informatics Assoc. 19(2): 196-201 (2012) - [j28]Jiaping Zheng, Wendy Webber Chapman
, Timothy A. Miller, Chen Lin, Rebecca S. Crowley, Guergana K. Savova:
A system for coreference resolution for the clinical narrative. J. Am. Medical Informatics Assoc. 19(4): 660-667 (2012) - [j27]Danielle L. Mowery, Janyce Wiebe, Shyam Visweswaran, Henk Harkema, Wendy Webber Chapman
:
Building an automated SOAP classifier for emergency department reports. J. Biomed. Informatics 45(1): 71-81 (2012) - [j26]Wendy Webber Chapman
, Guergana K. Savova, Jiaping Zheng, Melissa Tharp, Rebecca S. Crowley:
Anaphoric reference in clinical reports: Characteristics of an annotated corpus. J. Biomed. Informatics 45(3): 507-521 (2012) - [j25]Hyeoneui Kim
, Robert E. El-Kareh, Anupam Goel, F. N. U. Vineet, Wendy Webber Chapman
:
An approach to improve LOINC mapping through augmentation of local test names. J. Biomed. Informatics 45(4): 651-657 (2012) - [c39]Shazia Ashfaq, Amilcare Gentili, Wendy Webber Chapman, Brian E. Chapman:
A Preliminary Approach for Creating a Semi-synthetic Multimodal Clinical Data Set from a Publicly Available Image Repository. AMIA 2012 - [c38]Mike Conway, Wendy Webber Chapman:
Discovering Lexical Instantiations of Clinical Concepts using Web Services, WordNet and Corpus Resources. AMIA 2012 - [c37]Abhishek Kumar, Wendy W. Chapman:
TxtVect: A Tool for Extracting Features from Clinical Documents. AMIA 2012 - [c36]Brett R. South, Danielle L. Mowery, Óscar Ferrández, Shuying Shen, Ying Suo, Mingyuan Zhang, Annie Chen, Liqin Wang, Stéphane M. Meystre, Wendy Webber Chapman:
On the Road Towards Developing a Publicly Available Corpus of De-identified Clinical Texts. AMIA 2012 - [c35]Danielle L. Mowery, Sumithra Velupillai, Wendy W. Chapman:
Medical diagnosis lost in translation - Analysis of uncertainty and negation expressions in English and Swedish clinical texts. BioNLP@HLT-NAACL 2012: 56-64 - [c34]Brett R. South, Shuying Shen, Jianwei Leng, Tyler Forbush, Scott L. DuVall, Wendy W. Chapman:
A Prototype Tool Set to Support Machine-Assisted Annotation. BioNLP@HLT-NAACL 2012: 130-139 - [c33]Wendy Webber Chapman:
Developing Resources to Assist in Development and Application of NLP to Clinical Texts. CLEF (Online Working Notes/Labs/Workshop) 2012 - [c32]Brian E. Chapman, Wei Wei, Wendy Webber Chapman
:
The Frequency of ConText Lexical Items in Diverse Medical Texts. HISB 2012: 135 - [c31]Danielle L. Mowery, Pamela W. Jordan
, Janyce Wiebe, Wendy Webber Chapman
, Lin Liu:
Does Domain Knowledge Matter for Assertion Annotation in Clinical Texts? HISB 2012: 136 - 2011
- [j24]Guergana K. Savova, Wendy Webber Chapman
, Jiaping Zheng, Rebecca S. Crowley:
Anaphoric relations in the clinical narrative: corpus creation. J. Am. Medical Informatics Assoc. 18(4): 459-465 (2011) - [j23]Wendy Webber Chapman
, Prakash M. Nadkarni, Lynette Hirschman, Leonard W. D'Avolio, Guergana K. Savova, Özlem Uzuner:
Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions. J. Am. Medical Informatics Assoc. 18(5): 540-543 (2011) - [j22]Prakash M. Nadkarni, Lucila Ohno-Machado
, Wendy Webber Chapman
:
Natural language processing: an introduction. J. Am. Medical Informatics Assoc. 18(5): 544-551 (2011) - [j21]Henk Harkema, Wendy Webber Chapman
, Melissa I. Saul, Evan S. Dellon, Robert E. Schoen, Ateev Mehrotra
:
Developing a natural language processing application for measuring the quality of colonoscopy procedures. J. Am. Medical Informatics Assoc. 18(Supplement): 150-156 (2011) - [j20]Brian E. Chapman, Sean Lee, Hyunseok Peter Kang, Wendy Webber Chapman
:
Document-level classification of CT pulmonary angiography reports based on an extension of the ConText algorithm. J. Biomed. Informatics 44(5): 728-737 (2011) - [j19]Jiaping Zheng, Wendy Webber Chapman
, Rebecca S. Crowley, Guergana K. Savova:
Coreference resolution: A review of general methodologies and applications in the clinical domain. J. Biomed. Informatics 44(6): 1113-1122 (2011) - 2010
- [j18]Wendy Webber Chapman
, John N. Dowling, Atar Baer, David L. Buckeridge, Dennis Cochrane, Michael A. Conway, Peter L. Elkin, Jeremy U. Espino, Julia E. Gunn, Craig M. Hales
, Lori Hutwagner, Mikaela Keller, Catherine Larson, Rebecca Noe, Anya Okhmatovskaia, Karen Olson, Marc Paladini, Matthew Scholer, Carol Sniegoski, David Thompson, Bill Lober:
Developing syndrome definitions based on consensus and current use. J. Am. Medical Informatics Assoc. 17(5): 595-601 (2010) - [j17]Heather A. Piwowar
, Wendy Webber Chapman
:
Public sharing of research datasets: A pilot study of associations. J. Informetrics 4(2): 148-156 (2010)
2000 – 2009
- 2009
- [j16]Brett R. South, Shuying Shen, Makoto Jones, Jennifer H. Garvin, Matthew H. Samore, Wendy Webber Chapman, Adi V. Gundlapalli:
Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease. BMC Bioinform. 10(S-9): 12 (2009) - [j15]Wendy Webber Chapman
, K. Bretonnel Cohen:
Current issues in biomedical text mining and natural language processing. J. Biomed. Informatics 42(5): 757-759 (2009) - [j14]Dina Demner-Fushman, Wendy Webber Chapman
, Clement J. McDonald:
What can natural language processing do for clinical decision support? J. Biomed. Informatics 42(5): 760-772 (2009) - [j13]Henk Harkema, John N. Dowling, Tyler Thornblade, Wendy Webber Chapman
:
ConText: An algorithm for determining negation, experiencer, and temporal status from clinical reports. J. Biomed. Informatics 42(5): 839-851 (2009) - [c30]Jeannie Yuhaniak Irwin, Henk Harkema, Lee M. Christensen, Titus Schleyer, Peter J. Haug, Wendy Webber Chapman:
Methodology to Develop and Evaluate a Semantic Representation for NLP. AMIA 2009 - [c29]Danielle L. Mowery, Henk Harkema, John N. Dowling, Jonathan L. Lustgarten, Wendy W. Chapman:
Distinguishing Historical from Current Problems in Clinical Reports - Which Textual Features Help? BioNLP@HLT-NAACL 2009: 10-18 - [c28]Lee M. Christensen, Henk Harkema, Peter J. Haug, Jeannie Yuhaniak Irwin, Wendy W. Chapman:
ONYX: A System for the Semantic Analysis of Clinical Text. BioNLP@HLT-NAACL 2009: 19-27 - 2008
- [j12]Wendy Webber Chapman
, John N. Dowling, George Hripcsak:
Evaluation of training with an annotation schema for manual annotation of clinical conditions from emergency department reports. Int. J. Medical Informatics 77(2): 107-113 (2008) - [j11]Jagan Dara, John N. Dowling, Debbie A. Travers, Gregory F. Cooper, Wendy Webber Chapman
:
Evaluation of preprocessing techniques for chief complaint classification. J. Biomed. Informatics 41(4): 613-623 (2008) - [c27]Heather A. Piwowar, Wendy Webber Chapman:
Identifying Data Sharing in Biomedical Literature. AMIA 2008 - [c26]Brett R. South, Wendy W. Chapman, Sylvain Delisle, Shuying Shen, Ericka Kalp, Trish Perl, Matthew H. Samore, Adi V. Gundlapalli:
Optimizing A Syndromic Surveillance Text Classifier for Influenza-like Illness: Does Document Source Matter? AMIA 2008 - [c25]