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ORCIDGos Micklem
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2020 – today
- 2024
[c7]Adrián Bazaga, Pietro Lio, Gos Micklem:
Language Model Knowledge Distillation for Efficient Question Answering in Spanish. Tiny Papers @ ICLR 2024- [c6]Adrián Bazaga, Pietro Lio, Gos Micklem:
Unsupervised Pretraining for Fact Verification by Language Model Distillation. ICLR 2024 - [i11]Adrián Bazaga, Pietro Liò, Gos Micklem:
HyperBERT: Mixing Hypergraph-Aware Layers with Language Models for Node Classification on Text-Attributed Hypergraphs. CoRR abs/2402.07309 (2024) - 2023
- [i10]Adrián Bazaga, Pietro Liò, Gos Micklem:
Unsupervised Fact Verification by Language Model Distillation. CoRR abs/2309.16540 (2023) - [i9]Adrián Bazaga, Pietro Liò, Gos Micklem:
SQLformer: Deep Auto-Regressive Query Graph Generation for Text-to-SQL Translation. CoRR abs/2310.18376 (2023) - [i8]Adrián Bazaga, Pietro Liò, Gos Micklem:
Language Model Knowledge Distillation for Efficient Question Answering in Spanish. CoRR abs/2312.04193 (2023) - 2022
- [j17]Rachel Lyne
, Adrián Bazaga, Daniela Butano, Sergio Contrino, Joshua Heimbach, Fengyuan Hu, Alex Kalderimis, Mike Lyne, Kevin Herald Reierskog, Radek Stepan, Julie M. Sullivan, Archie Wise, Yo Yehudi, Gos Micklem:
HumanMine: advanced data searching, analysis and cross-species comparison. Database J. Biol. Databases Curation 2022(2022) (2022) - 2021
- [i7]Adrián Bazaga, Nupur Gunwant, Gos Micklem:
Translating synthetic natural language to database queries: a polyglot deep learning framework. CoRR abs/2104.07010 (2021) - [i6]Luca Pion-Tonachini, Kristofer E. Bouchard, Héctor García Martín, Sean Peisert, W. Bradley Holtz, Anil Aswani, Dipankar Dwivedi, Haruko M. Wainwright, Ghanshyam Pilania, Benjamin Nachman, Babetta L. Marrone, Nicola Falco, Prabhat, Daniel B. Arnold, Alejandro Wolf-Yadlin, Sarah Powers, Sharlee Climer, Quinn Jackson, Ty Carlson, Michael Sohn, Petrus H. Zwart, Neeraj Kumar, Amy Justice, Claire J. Tomlin, Daniel A. Jacobson, Gos Micklem, Georgios V. Gkoutos, Peter J. Bickel, Jean-Baptiste Cazier, Juliane Müller, Bobbie-Jo Webb-Robertson, Rick Stevens, Mark Anderson, Kenneth Kreutz-Delgado, Michael W. Mahoney, James B. Brown:
Learning from learning machines: a new generation of AI technology to meet the needs of science. CoRR abs/2111.13786 (2021)
2010 – 2019
- 2019
- [j16]Konstantinos A Kyritsis, Bing Wang, Julie M. Sullivan, Rachel Lyne, Gos Micklem:
InterMineR: an R package for InterMine databases. Bioinform. 35(17): 3206-3207 (2019) - [c5]Daniela Butano, Justin Clark-Casey, Sergio Contrino, Joshua Heimbach, Rachel Lyne, Kevin Herald Reierskog, Julie M. Sullivan, Yo Yehudi, Gos Micklem:
Implementing FAIR Principles in InterMine. SWAT4HCLS 2019: 137-138 - [i5]Toshiaki Katayama, Shuichi Kawashima, Gos Micklem, Shin Kawano, Jin-Dong Kim, Simon Kocbek, Shinobu Okamoto, Yue Wang, Hongyan Wu, Atsuko Yamaguchi, Yasunori Yamamoto, Erick Antezana, Kiyoko F. Aoki-Kinoshita, Kazuharu Arakawa, Masaki Banno, Joachim Baran, Jerven T. Bolleman, Raoul Jean Pierre Bonnal, Hidemasa Bono, Jesualdo Tomás Fernández-Breis, Robert M. Buels, Matthew P. Campbell, Hirokazu Chiba, Peter J. A. Cock, Kevin Bretonnel Cohen, Michel Dumontier, Takatomo Fujisawa, Toyofumi Fujiwara, Leyla J. García, Pascale Gaudet, Emi Hattori, Robert Hoehndorf, Kotone Itaya, Maori Ito, Daniel Jamieson, Simon Jupp, Nick S. Juty, Alex Kalderimis, Fumihiro Kato, Hideya Kawaji, Takeshi Kawashima, Akira R. Kinjo, Yusuke Komiyama, Masaaki Kotera, Tatsuya Kushida, James Malone, Masaaki Matsubara, Satoshi Mizuno, Sayaka Mizutani, Hiroshi Mori, Yuki Moriya, Katsuhiko Murakami, Takeru Nakazato, Hiroyo Nishide, Yosuke Nishimura, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Hiromasa Ono, Yasset Pérez-Riverol, Daisuke Shinmachi, Andrea Splendiani, Francesco Strozzi, Shinya Suzuki, Junichi Takehara, Mark Thompson, Toshiaki Tokimatsu, Ikuo Uchiyama, Karin Verspoor, Mark D. Wilkinson, Sarala M. Wimalaratne, Issaku Yamada, Nozomi Yamamoto, Masayuki Yarimizu, Shoko Kawamoto, Toshihisa Takagi:
BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services. F1000Research 8: 1677 (2019) - 2018
- [j15]M. Sivade Dumousseau, Diego Alonso-López, Mais G. Ammari, Glyn Bradley, Nancy H. Campbell, Arnaud Céol, Gianni Cesareni, Colin W. Combe, Javier De Las Rivas, Noemi del-Toro, Joshua Heimbach, Henning Hermjakob, Igor Jurisica, Maximilian Koch, Luana Licata, Ruth C. Lovering, David J. Lynn, Birgit H. M. Meldal, Gos Micklem, Simona Panni, Pablo Porras, Sylvie Ricard-Blum, Bernd Roechert, Lukasz Salwínski, Anjali Shrivastava, Julie M. Sullivan, Nicolas Thierry-Mieg, Yo Yehudi, Kim Van Roey, Sandra E. Orchard:
Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions. BMC Bioinform. 19(1): 134:1-134:8 (2018) - [i4]Daria Komkova, Rachel Lyne, Julie M. Sullivan, Yo Yehudi, Gos Micklem:
The InterMine Android app: Cross-organism genomic data in your pocket. F1000Research 7: 1837 (2018) - 2017
- [j14]Colin W. Combe, Marine Sivade, Henning Hermjakob, Joshua Heimbach, Birgit H. M. Meldal, Gos Micklem, Sandra E. Orchard, Juri Rappsilber:
ComplexViewer: visualization of curated macromolecular complexes. Bioinform. 33(22): 3673-3675 (2017) - [j13]Clare Pacini, James W. Ajioka, Gos Micklem:
Empirical Bayes method for reducing false discovery rates of correlation matrices with block diagonal structure. BMC Bioinform. 18(1): 213:1-213:6 (2017) - 2016
- [c4]David Rhee, Kevin R. Shieh, Julie M. Sullivan, Gos Micklem, Kami Kim, Aaron Golden:
Understanding the Systems Biology of Pathogen Virulence Using Semantic Methodologies. ICSC 2016: 314-320 - [c3]Maxime Déraspe, Kalpana Karra, Gail Binkley, Julie M. Sullivan, Gos Micklem, Jacques Corbeil, J. Michael Cherry, Michel Dumontier:
Semantic Research Platform for Model Organisms. BMDID@ISWC 2016 - [c2]Maxime Déraspe, Gail Binkley, Daniela Butano, Matthew Chadwick, J. Michael Cherry, Justin Clark-Casey, Sergio Contrino, Jacques Corbeil, Joshua Heimbach, Kalpana Karra, Rachel Lyne, Julie M. Sullivan, Yo Yehudi, Gos Micklem, Michel Dumontier:
Making Linked Data SPARQL with the InterMine Biological Data Warehouse. SWAT4LS 2016 - 2015
- [j12]David B. Rhee, Matthew McKnight Croken, Kevin R. Shieh, Julie M. Sullivan, Gos Micklem, Kami Kim, Aaron Golden:
toxoMine: an integrated omics data warehouse for Toxoplasma gondii systems biology research. Database J. Biol. Databases Curation 2015 (2015) - [j11]Vivek Krishnakumar, Matthew R. Hanlon, Sergio Contrino, Erik S. Ferlanti, Svetlana Karamycheva, Maria Kim, Benjamin D. Rosen, Chia-Yi Cheng, Walter Moreira, Stephen A. Mock, Joseph Stubbs, Julie M. Sullivan, Konstantinos Krampis, Jason R. Miller, Gos Micklem, Matthew Vaughn, Christopher D. Town:
Araport: the Arabidopsis Information Portal. Nucleic Acids Res. 43(Database-Issue): 1003-1009 (2015) - 2014
- [j10]Alex Kalderimis, Rachel Lyne, Daniela Butano, Sergio Contrino, Mike Lyne, Joshua Heimbach, Fengyuan Hu, Richard N. Smith, Radek Stepan, Julie M. Sullivan, Gos Micklem:
InterMine: extensive web services for modern biology. Nucleic Acids Res. 42(Webserver-Issue): 468-472 (2014) - [i3]Alex Kalderimis, Radek Stepan, Julie M. Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem:
BioJS InterMine List Analysis: A BioJS component for displaying graphical or statistical analysis of collections of items from InterMine endpoints. F1000Research 3: 45 (2014) - [i2]Alex Kalderimis, Radek Stepan, Julie M. Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem:
BioJS InterMineTable Component: A BioJS component for displaying data from InterMine compatible webservice endpoints. F1000Research 3: 46 (2014) - [i1]Alex Kalderimis, Radek Stepan, Julie M. Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem:
BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs. F1000Research 3: 51 (2014) - 2013
- [j9]Mike Lyne, Richard N. Smith, Rachel Lyne, Jelena Aleksic, Fengyuan Hu, Alex Kalderimis, Radek Stepan, Gos Micklem:
metabolicMine: an integrated genomics, genetics and proteomics data warehouse for common metabolic disease research. Database J. Biol. Databases Curation 2013 (2013) - 2012
- [j8]Rama Balakrishnan, Julie Park, Kalpana Karra, Benjamin C. Hitz, Gail Binkley, Eurie L. Hong, Julie M. Sullivan, Gos Micklem, J. Michael Cherry:
YeastMine - an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit. Database J. Biol. Databases Curation 2012 (2012) - [j7]Richard N. Smith, Jelena Aleksic, Daniela Butano, Adrian Carr, Sergio Contrino, Fengyuan Hu, Mike Lyne, Rachel Lyne, Alex Kalderimis, Kim Rutherford, Radek Stepan, Julie M. Sullivan, Matthew Wakeling, Xavier Watkins, Gos Micklem:
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data. Bioinform. 28(23): 3163-3165 (2012) - [j6]Sergio Contrino, Richard N. Smith, Daniela Butano, Adrian Carr, Fengyuan Hu, Rachel Lyne, Kim Rutherford, Alex Kalderimis, Julie M. Sullivan, Seth Carbon, Ellen T. Kephart, Paul Lloyd, E. O. Stinson, Nicole L. Washington, Marc D. Perry, Peter Ruzanov, Zheng Zha, Suzanna E. Lewis, Lincoln D. Stein, Gos Micklem:
modMine: flexible access to modENCODE data. Nucleic Acids Res. 40(Database-Issue): 1082-1088 (2012) - 2011
- [j5]Nicole L. Washington, E. O. Stinson, Marc D. Perry, Peter Ruzanov, Sergio Contrino, Richard N. Smith, Zheng Zha, Rachel Lyne, Adrian Carr, Paul Lloyd, Ellen T. Kephart, Sheldon J. McKay, Gos Micklem, Lincoln D. Stein, Suzanna E. Lewis:
The modENCODE Data Coordination Center: lessons in harvesting comprehensive experimental details. Database J. Biol. Databases Curation 2011 (2011) - [j4]Peter Sykacek, David P. Kreil, Lisa A. Meadows, Richard P. Auburn, Bettina Fischer, Steven Russell, Gos Micklem:
The impact of quantitative optimization of hybridization conditions on gene expression analysis. BMC Bioinform. 12: 73 (2011)
2000 – 2009
- 2007
- [j3]Peter Sykacek, R. Clarkson, Cristin G. Print, R. A. Furlong, Gos Micklem:
Bayesian modelling of shared gene function. Bioinform. 23(15): 1936-1944 (2007) - [j2]Kaj Bernhardt, Nikhilesh Chand, Elizabeth Carter, Jisun Lee, Yang Xu, Xueni Zhu, Duncan Rowe, James W. Ajioka, J. M. Gonçalves, Jim Haseloff, Gos Micklem:
New tools for self-organized pattern formation. BMC Syst. Biol. 1(S-1): S10 (2007) - 2005
- [j1]Peter Sykacek, R. A. Furlong, Gos Micklem:
A friendly statistics package for microarray analysis. Bioinform. 21(21): 4069-4070 (2005) - 2003
- [c1]David P. Kreil, Richard P. Auburn, Lisa A. Meadows, Steven Russell, Gos Micklem:
Quantitative microarray spot profile optimization: A systematic evaluation of buffer/slide combinations. German Conference on Bioinformatics 2003: 77-81
Coauthor Index
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last updated on 2024-10-07 22:14 CEST by the dblp team
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