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Journal Articles
- 2024
[j11]Chih-Wei Chung, Seng-Cho Chou, Tzu-Hung Hsiao, Grace Joyce Zhang, Yu-Fang Chung, Yi-Ming Chen:
Machine learning approaches to identify systemic lupus erythematosus in anti-nuclear antibody-positive patients using genomic data and electronic health records. BioData Min. 17(1) (2024)- [j10]Yu-Ching Hsu, Yu-Chiao Chiu, Tzu-Pin Lu, Tzu-Hung Hsiao, Yidong Chen:
Predicting drug response through tumor deconvolution by cancer cell lines. Patterns 5(4): 100949 (2024) - 2023
- [j9]Amrita Chattopadhyay, Chien-Yueh Lee, Ying-Cheng Shen, Kuan-Chen Lu, Tzu-Hung Hsiao, Ching-Heng Lin, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu
, Eric Y. Chuang:
Multi-ethnic Imputation System (MI-System): A genotype imputation server for high-dimensional data. J. Biomed. Informatics 143: 104423 (2023) - 2021
- [j8]Chih-Wei Chung, Tzu-Hung Hsiao, Chih-Jen Huang, Yen-Ju Chen, Hsin-Hua Chen, Ching-Heng Lin, Seng-Cho Chou, Tzer-Shyong Chen, Yu-Fang Chung, Hwai-I Yang, Yi-Ming Chen:
Machine learning approaches for the genomic prediction of rheumatoid arthritis and systemic lupus erythematosus. BioData Min. 14(1) (2021) - 2020
- [j7]Amanda Brucker, Wenbin Lu, Rachel Marceau West, Qi-You Yu, Chuhsing Kate Hsiao, Tzu-Hung Hsiao, Ching-Heng Lin, Patrik K. E. Magnusson, Patrick F. Sullivan, Jin P. Szatkiewicz, Tzu-Pin Lu, Jung-Ying Tzeng:
Association test using Copy Number Profile Curves (CONCUR) enhances power in rare copy number variant analysis. PLoS Comput. Biol. 16(5) (2020) - 2018
- [j6]Yu-Chiao Chiu, Tzu-Hung Hsiao, Li-Ju Wang, Yidong Chen, Eric Y. Chuang:
Analyzing Differential Regulatory Networks Modulated by Continuous-State Genomic Features in Glioblastoma Multiforme. IEEE ACM Trans. Comput. Biol. Bioinform. 15(6): 1754-1764 (2018) - 2017
- [j5]Yu-Chiao Chiu, Li-Ju Wang, Tzu-Pin Lu, Tzu-Hung Hsiao, Eric Y. Chuang, Yidong Chen:
Differential correlation analysis of glioblastoma reveals immune ceRNA interactions predictive of patient survival. BMC Bioinform. 18(1): 132:1-132:11 (2017) - 2016
- [j4]Yu-Ching Hsu, Yu-Chiao Chiu, Yidong Chen, Tzu-Hung Hsiao, Eric Y. Chuang:
A simple gene set-based method accurately predicts the synergy of drug pairs. BMC Syst. Biol. 10(S-3): 66 (2016) - 2014
- [j3]Yufei Xiao, Tzu-Hung Hsiao, Uthra Suresh, Hung-I Harry Chen, Xiaowu Wu, Steven E. Wolf, Yidong Chen:
A novel significance score for gene selection and ranking. Bioinform. 30(6): 801-807 (2014) - 2013
- [j2]Mario Flores, Tzu-Hung Hsiao, Yu-Chiao Chiu, Eric Y. Chuang, Yufei Huang, Yidong Chen:
Gene Regulation, Modulation, and Their Applications in Gene Expression Data Analysis. Adv. Bioinformatics 2013: 360678:1-360678:11 (2013) - [j1]Tzu-Hung Hsiao, Hung-I Harry Chen, Stephanie Roessler, Xin Wei Wang, Yidong Chen:
Identification of genomic functional hotspots with copy number alteration in liver cancer. EURASIP J. Bioinform. Syst. Biol. 2013: 14 (2013)
Conference and Workshop Papers
- 2020
- [c12]Kuan-Hung Yeh, Ching-Heng Lin, Tzu-Hung Hsiao, Tzu-Pin Lu:
Genome-Wide Association Study (GWAS) on Metabolic Syndrome in Subjects with Abdominal Obesity in a Taiwanese Population. BIBM 2020: 1403-1407 - 2015
- [c11]Yu-Chiao Chiu, Kai-Wen Liang, Tzu-Hung Hsiao, Yidong Chen, Eric Y. Chuang:
Analyzing differential regulatory networks modulated by continuous-state genomic features in glioblastoma multiforme. BIBM 2015: 171-176 - [c10]Chin-Ting Wu, Tzu-Hung Hsiao, Yu-Chiao Chiu, Yu-Ching Hsu, Eric Y. Chuang, Yidong Chen:
Patho-finder - A fast and accurate program for pathogen identification through RNA-seq. BIBM 2015: 1148-1151 - 2013
- [c9]Yu-Chiao Chiu, Eric Y. Chuang, Tzu-Hung Hsiao, Yidong Chen:
Modeling competing endogenous RNA regulatory networks in glioblastoma multiforme. BIBM 2013: 201-204 - [c8]Yu-Chiao Chiu, Eric Y. Chuang, Tzu-Hung Hsiao, Yidong Chen:
Characterization of conditions for competing endogenous RNA regulation in GBM. GENSiPS 2013: 23 - 2012
- [c7]Tzu-Hung Hsiao, Hung-I Harry Chen, Yidong Chen, Yu-Heng Chen, Eric Y. Chuang:
Using gene sets to identify putative drugs for breast cancer. BIBM 2012: 1-4 - [c6]Lin Zhang, Hui Liu, Tzu-Hung Hsiao, Yidong Chen, Yufei Huang:
An investigation of clinical outcome prediction from integrative genomic profiles in ovarian cancer. GENSiPS 2012: 103-106 - [c5]Tzu-Hung Hsiao, Hung-I Harry Chen, Yidong Chen:
Identification of functional genomic regions with copy number alteration in liver cancer. GENSiPS 2012: 155-158 - 2011
- [c4]Tzu-Hung Hsiao, Hung-I Harry Chen, Patricia C. Sanchez-Diaz, Jaclyn Y. Hung, Yidong Chen, Yufei Huang:
Gene sets enrichment analysis of miRNA expression profile. BIBM Workshops 2011: 449-454 - [c3]Fang-Han Hsu, Erchin Serpedin, Tzu-Hung Hsiao, Alexander J. R. Bishop, Edward R. Dougherty, Yidong Chen:
Identifying genes associated with chemotherapy response in ovarian carcinomas based on DNA copy number and expression profiles. GENSiPS 2011: 46-49 - [c2]Hung-I Harry Chen, Tzu-Hung Hsiao, Yidong Chen, Charles Keller:
S-score: A novel scoring method of gene signatures for molecular classification. GENSiPS 2011: 154-157 - 2000
- [c1]Ren C. Luo, Tzu-Hung Hsiao:
Development of an intelligent electrical walking rehabilitation system. IROS 2000: 559-564
Coauthor Index
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