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Marco Brandizi
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2010 – 2019
- 2018
- [j13]Marco Brandizi
, Ajit Singh
, Christopher J. Rawlings
, Keywan Hassani-Pak
:
Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach. J. Integr. Bioinform. 15(3) (2018) - [c3]Marco Brandizi, Ajit Singh, Keywan Hassani-Pak:
Getting the best of Linked Data and Property Graphs: rdf2neo and the KnetMiner use case. SWAT4LS 2018 - 2017
- [j12]Marco Brandizi
, Olga Melnichuk, Raffael Bild, Florian Kohlmayer
, Benedicto Rodriguez-Castro, Helmut Spengler, Klaus A. Kuhn, Wolfgang Kuchinke
, Christian Ohmann, Timo Mustonen, Mikael Linden, Tommi H. Nyrönen
, Ilkka Lappalainen
, Alvis Brazma
, Ugis Sarkans
:
Orchestrating differential data access for translational research: a pilot implementation. BMC Medical Informatics Decis. Mak. 17(1): 30:1-30:14 (2017) - 2015
- [j11]Nikolay Kolesnikov, Emma Hastings
, Maria Keays
, Olga Melnichuk, Y. Amy Tang
, Eleanor Williams, Miroslaw Dylag, Natalja Kurbatova
, Marco Brandizi, Tony Burdett
, Karyn Megy
, Ekaterina Pilicheva, Gabriella Rustici
, Andrew Tikhonov, Helen E. Parkinson
, Robert Petryszak
, Ugis Sarkans
, Alvis Brazma
:
ArrayExpress update - simplifying data submissions. Nucleic Acids Res. 43(Database-Issue): 1113-1116 (2015) - 2014
- [j10]Simon Jupp
, James Malone, Jerven T. Bolleman
, Marco Brandizi, Mark Davies, Leyla J. García
, Anna Gaulton
, Sebastien Gehant
, Camille Laibe
, Nicole Redaschi
, Sarala M. Wimalaratne
, Maria Jesus Martin
, Nicolas Le Novère, Helen E. Parkinson, Ewan Birney, Andrew M. Jenkinson
:
The EBI RDF platform: linked open data for the life sciences. Bioinform. 30(9): 1338-1339 (2014) - [j9]Adam Faulconbridge
, Tony Burdett
, Marco Brandizi, Mikhail Gostev, Rui Pedro Pereira, Drashtti Vasant, Ugis Sarkans
, Alvis Brazma
, Helen E. Parkinson
:
Updates to BioSamples database at European Bioinformatics Institute. Nucleic Acids Res. 42(Database-Issue): 50-52 (2014) - 2013
- [j8]Gabriella Rustici
, Nikolay Kolesnikov
, Marco Brandizi
, Tony Burdett
, Miroslaw Dylag, Ibrahim Emam
, Anna Farne, Emma Hastings
, Jon C. Ison
, Maria Keays
, Natalja Kurbatova
, James Malone, Roby Mani, Annalisa Mupo
, Rui Pedro Pereira, Ekaterina Pilicheva, Johan Rung
, Anjan Sharma, Y. Amy Tang
, Tobias Ternent
, Andrew Tikhonov, Danielle Welter
, Eleanor Williams
, Alvis Brazma
, Helen E. Parkinson
, Ugis Sarkans
:
ArrayExpress update - trends in database growth and links to data analysis tools. Nucleic Acids Res. 41(Database-Issue): 987-990 (2013) - 2012
- [j7]Marco Brandizi
, Natalja Kurbatova
, Ugis Sarkans
, Philippe Rocca-Serra:
graph2tab, a library to convert experimental workflow graphs into tabular formats. Bioinform. 28(12): 1665-1667 (2012) - [j6]Mikhail Gostev, Adam Faulconbridge
, Marco Brandizi
, Julio Fernandez-Banet
, Ugis Sarkans
, Alvis Brazma
, Helen E. Parkinson
:
The BioSample Database (BioSD) at the European Bioinformatics Institute. Nucleic Acids Res. 40(Database-Issue): 64-70 (2012) - 2011
- [j5]Andrea Splendiani
, Michaela Gündel, Jonathan M. Austyn, Duccio Cavalieri
, Ciro Scognamiglio, Marco Brandizi
:
Knowledge sharing and collaboration in translational research, and the DC-THERA Directory. Briefings Bioinform. 12(6): 562-575 (2011) - [j4]Helen E. Parkinson
, Ugis Sarkans
, Nikolay Kolesnikov
, Niran Abeygunawardena, Tony Burdett
, Miroslaw Dylag, Ibrahim Emam
, Anna Farne, Emma Hastings
, Ele Holloway, Natalja Kurbatova
, Margus Lukk
, James Malone, Roby Mani, Ekaterina Pilicheva, Gabriella Rustici
, Anjan Sharma, Eleanor Williams
, Tomasz Adamusiak
, Marco Brandizi
, Nataliya Sklyar, Alvis Brazma
:
ArrayExpress update - an archive of microarray and high-throughput sequencing-based functional genomics experiments. Nucleic Acids Res. 39(Database-Issue): 1002-1004 (2011) - 2010
- [j3]Philippe Rocca-Serra, Marco Brandizi
, Eamonn Maguire, Nataliya Sklyar, Chris F. Taylor, Kimberly Begley, Dawn Field, Stephen C. Harris, Winston Hide
, Oliver Hofmann
, Steffen Neumann, Peter Sterk
, Weida Tong, Susanna-Assunta Sansone
:
ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level. Bioinform. 26(18): 2354-2356 (2010)
2000 – 2009
- 2009
- [j2]Helen E. Parkinson
, Misha Kapushesky, Nikolay Kolesnikov
, Gabriella Rustici
, Mohammadreza Shojatalab, Niran Abeygunawardena, Hugo Bérubé, Miroslaw Dylag, Ibrahim Emam
, Anna Farne, Ele Holloway, Margus Lukk
, James Malone, Roby Mani, Ekaterina Pilicheva, Tim F. Rayner
, Faisal Ibne Rezwan
, Anjan Sharma, Eleanor Williams
, Xiangqun Zheng Bradley
, Tomasz Adamusiak
, Marco Brandizi
, Tony Burdett
, Richard Coulson, Maria Krestyaninova
, Pavel Kurnosov, Eamonn Maguire, Sudeshna Guha Neogi, Philippe Rocca-Serra, Susanna-Assunta Sansone, Nataliya Sklyar, Mengyao Zhao, Ugis Sarkans
, Alvis Brazma
:
ArrayExpress update - from an archive of functional genomics experiments to the atlas of gene expression. Nucleic Acids Res. 37(Database-Issue): 868-872 (2009) - [c2]Marco Brandizi, Michaela Gündel, Ciro Scognamiglio, Andrea Splendiani:
DC-THERA Directory, a Knowledge Management System for the support of the European Dendritic Cell Immunology Community. SWAT4LS 2009 - 2008
- [c1]Michaela Gündel, Ciro Scognamiglio, Marco Brandizi, Andrea Splendiani:
The DC-THERA Directory: A Knowledge Management System to Support Collaboration on Dendritic Cell and Immunology Research. SWAT4LS 2008 - 2007
- [j1]Andrea Splendiani
, Marco Brandizi
, Gael Even, Ottavio Beretta, Norman Pavelka
, Mattia Pelizzola
, Manuel Mayhaus, Maria Foti
, Giancarlo Mauri
, Paola Ricciardi-Castagnoli:
The Genopolis Microarray Database. BMC Bioinform. 8(S-1) (2007)
Coauthor Index
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