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2020 – today
- 2025
[j3]Maximilian Zenk
, David Zimmerer, Fabian Isensee, Jeremias Traub, Tobias Norajitra, Paul F. Jäger, Klaus H. Maier-Hein:
Comparative benchmarking of failure detection methods in medical image segmentation: Unveiling the role of confidence aggregation. Medical Image Anal. 101: 103392 (2025)- 2024
- [c18]Gregor Köhler, Tassilo Wald, Constantin Ulrich, David Zimmerer, Paul F. Jaeger, Jörg K. H. Franke, Simon Kohl, Fabian Isensee, Klaus H. Maier-Hein:
Abstract: RecycleNet - Latent Feature Recycling Leads to Iterative Decision Refinement. Bildverarbeitung für die Medizin 2024: 219 - [c17]Nico Disch, Robin Peretzke, Saikat Roy, Constantin Ulrich, David Zimmerer, Rainer Stiefelhagen, Jens Kleesiek, Klaus H. Maier-Hein:
Back to the Future: Challenges of Sparse and Irregular Medical Image Time Series. LDTM/MMMI/ML4MHD/ML-CDS@MICCAI 2024: 15-25 - [c16]David Zimmerer, Klaus H. Maier-Hein:
Beyond Heatmaps: A Comparative Analysis of Metrics for Anomaly Localization in Medical Images. UNSURE@MICCAI 2024: 138-148 - [c15]Tassilo Wald, Constantin Ulrich, Priyank Jaini, Gregor Köhler, David Zimmerer, Stefan Denner, Fabian Isensee, Michael Baumgartner, Klaus H. Maier-Hein:
Decoupling Semantic Similarity from Spatial Alignment for Neural Networks. NeurIPS 2024 - [c14]Gregor Köhler, Tassilo Wald, Constantin Ulrich, David Zimmerer, Paul F. Jaeger, Jörg K. H. Franke, Simon Kohl, Fabian Isensee, Klaus H. Maier-Hein:
RecycleNet: Latent Feature Recycling Leads to Iterative Decision Refinement. WACV 2024: 799-807 - [i17]Stefan Denner, David Zimmerer, Dimitrios Bounias, Markus Bujotzek, Shuhan Xiao, Lisa Kausch, Philipp Schader, Tobias Penzkofer, Paul F. Jäger, Klaus H. Maier-Hein:
Leveraging Foundation Models for Content-Based Medical Image Retrieval in Radiology. CoRR abs/2403.06567 (2024) - [i16]Maximilian Zenk, David Zimmerer, Fabian Isensee, Jeremias Traub, Tobias Norajitra, Paul F. Jäger, Klaus H. Maier-Hein:
Comparative Benchmarking of Failure Detection Methods in Medical Image Segmentation: Unveiling the Role of Confidence Aggregation. CoRR abs/2406.03323 (2024) - [i15]Stefan Denner, Markus Bujotzek, Dimitrios Bounias, David Zimmerer, Raphael Stock, Paul F. Jäger, Klaus H. Maier-Hein:
Visual Prompt Engineering for Medical Vision Language Models in Radiology. CoRR abs/2408.15802 (2024) - [i14]Tassilo Wald, Constantin Ulrich, Gregor Köhler, David Zimmerer, Stefan Denner, Michael Baumgartner, Fabian Isensee, Priyank Jaini, Klaus H. Maier-Hein:
Decoupling Semantic Similarity from Spatial Alignment for Neural Networks. CoRR abs/2410.23107 (2024) - 2023
- [c13]Carsten T. Lüth, David Zimmerer, Gregor Köhler, Paul F. Jaeger, Fabian Isensee, Klaus H. Maier-Hein:
Contrastive Representations for Unsupervised Anomaly Detection and Localization. Bildverarbeitung für die Medizin 2023: 246-252 - [c12]David Zimmerer, Peter M. Full, Fabian Isensee, Paul Jäger, Tim Adler, Jens Petersen, Gregor Köhler, Tobias Roß, Annika Reinke, Antanas Kascenas, Bjørn Sand Jensen, Alison Q. O'Neil, Jeremy Tan, Benjamin Hou, James Batten, Huaqi Qiu, Bernhard Kainz, Nina Shvetsova, Irina Fedulova, Dmitry V. Dylov, Baolun Yu, Jianyang Zhai, Jingtao Hu, Runxuan Si, Sihang Zhou, Siqi Wang, Xinyang Li, Xuerun Chen, Yang Zhao, Sergio Naval Marimont, Giacomo Tarroni, Victor Saase, Lena Maier-Hein, Klaus H. Maier-Hein:
Abstract: MOOD 2020 - A Public Benchmark for Out-of-distribution Detection and Localization on Medical Images. Bildverarbeitung für die Medizin 2023: 312 - [c11]Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Sharib Ali, Vincent Andrearczyk, Marc Aubreville, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Veronika Cheplygina, Marie Daum, Marleen de Bruijne, Adrien Depeursinge, Reuben Dorent, Jan Egger, David G. Ellis, Sandy Engelhardt, Melanie Ganz, Noha M. Ghatwary, Gabriel Girard, Patrick Godau, Anubha Gupta, Lasse Hansen, Kanako Harada, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Pierre Jannin, A. Emre Kavur, Oldrich Kodym, Michal Kozubek, Jianning Li, Hongwei Bran Li, Jun Ma, Carlos Martín-Isla, Bjoern H. Menze, J. Alison Noble, Valentin Oreiller, Nicolas Padoy, Sarthak Pati, Kelly Payette, Tim Rädsch, Jonathan Rafael-Patino, Vivek Singh Bawa, Stefanie Speidel, Carole H. Sudre, Kimberlin M. H. van Wijnen, Martin Wagner, D. Wei, Amine Yamlahi, Moi Hoon Yap, C. Yuan, Maximilian Zenk, A. Zia, David Zimmerer, Dogu Baran Aydogan, Binod Bhattarai, Louise Bloch, Raphael Brüngel, J. Cho, C. Choi, Q. Dou, Ivan Ezhov, Christoph M. Friedrich, C. Fuller, Rebati Raman Gaire, Adrian Galdran, Álvaro García-Faura, Maria Grammatikopoulou, S. Hong, Mostafa Jahanifar, I. Jang, Abdolrahim Kadkhodamohammadi, I. Kang, Florian Kofler, S. Kondo, Hugo Jaco Kuijf, M. Li, M. Luu, Tomaz Martincic, Pedro Morais, Mohamed A. Naser, Bruno Oliveira, David Owen, S. Pang, J. Park, S. Park, Szymon Plotka, Élodie Puybareau, Nasir M. Rajpoot, K. Ryu, Numan Saeed, Adam Shephard, Pengcheng Shi, Dejan Stepec, Ronast Subedi, Guillaume Tochon, Helena R. Torres, Hélène Urien, João L. Vilaça, Kareem A. Wahid, H. Wang, J. Wang, L. Wang, X. Wang, Benedikt Wiestler, Marek Wodzinski, F. Xia, J. Xie, Z. Xiong, Sen Yang, Y. Yang, Zixuan Zhao, Klaus H. Maier-Hein, Paul F. Jäger, Annette Kopp-Schneider, Lena Maier-Hein:
Why is the Winner the Best? CVPR 2023: 19955-19966 - [i13]Carsten T. Lüth, David Zimmerer, Gregor Köhler, Paul F. Jaeger, Fabian Isensee, Jens Petersen, Klaus H. Maier-Hein:
CRADL: Contrastive Representations for Unsupervised Anomaly Detection and Localization. CoRR abs/2301.02126 (2023) - [i12]Saikat Roy, Tassilo Wald, Gregor Köhler, Maximilian Rokuss, Nico Disch, Julius Holzschuh, David Zimmerer, Klaus H. Maier-Hein:
SAM.MD: Zero-shot medical image segmentation capabilities of the Segment Anything Model. CoRR abs/2304.05396 (2023) - [i11]Tassilo Wald, Constantin Ulrich, Fabian Isensee, David Zimmerer, Gregor Köhler, Michael Baumgartner, Klaus H. Maier-Hein:
Exploring new ways: Enforcing representational dissimilarity to learn new features and reduce error consistency. CoRR abs/2307.02516 (2023) - [i10]Gregor Köhler, Tassilo Wald, Constantin Ulrich, David Zimmerer, Paul F. Jaeger, Jörg K. H. Franke, Simon Kohl, Fabian Isensee, Klaus H. Maier-Hein:
RecycleNet: Latent Feature Recycling Leads to Iterative Decision Refinement. CoRR abs/2309.07513 (2023) - 2022
- [b1]David Zimmerer:
Unsupervised Learning for Anomaly Detection in Medical Images. University of Heidelberg, Germany, 2022 - [j2]David Zimmerer, Peter M. Full, Fabian Isensee, Paul Jäger, Tim Adler, Jens Petersen, Gregor Köhler, Tobias Roß, Annika Reinke, Antanas Kascenas, Bjørn Sand Jensen, Alison Q. O'Neil, Jeremy Tan, Benjamin Hou, James Batten, Huaqi Qiu, Bernhard Kainz, Nina Shvetsova, Irina Fedulova, Dmitry V. Dylov, Baolun Yu, Jianyang Zhai, Jingtao Hu, Runxuan Si, Sihang Zhou, Siqi Wang, Xinyang Li, Xuerun Chen, Yang Zhao, Sergio Naval Marimont, Giacomo Tarroni, Victor Saase, Lena Maier-Hein, Klaus H. Maier-Hein:
MOOD 2020: A Public Benchmark for Out-of-Distribution Detection and Localization on Medical Images. IEEE Trans. Medical Imaging 41(10): 2728-2738 (2022) - [c10]David Zimmerer, Daniel Paech, Carsten T. Lüth, Jens Petersen, Gregor Köhler, Klaus H. Maier-Hein:
Unsupervised Anomaly Detection in the Wild. Bildverarbeitung für die Medizin 2022: 26-31 - [c9]Maximilian Zenk, David Zimmerer, Fabian Isensee, Paul F. Jäger, Jakob Wasserthal, Klaus H. Maier-Hein:
Realistic Evaluation of FixMatch on Imbalanced Medical Image Classification Tasks. Bildverarbeitung für die Medizin 2022: 291-296 - [e1]Marc Aubreville, David Zimmerer, Mattias P. Heinrich:
Biomedical Image Registration, Domain Generalisation and Out-of-Distribution Analysis - MICCAI 2021 Challenges: MIDOG 2021, MOOD 2021, and Learn2Reg 2021, Held in Conjunction with MICCAI 2021, Strasbourg, France, September 27 - October 1, 2021, Proceedings. Lecture Notes in Computer Science 13166, Springer 2022, ISBN 978-3-030-97280-6 [contents] - 2021
- [c8]Jens Petersen, Fabian Isensee, Gregor Köhler, Paul F. Jäger, David Zimmerer, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Vollmuth, Klaus H. Maier-Hein:
Continuous-Time Deep Glioma Growth Models. MICCAI (3) 2021: 83-92 - [c7]Jens Petersen, Gregor Köhler, David Zimmerer, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein:
GP-ConvCNP: Better generalization for conditional convolutional Neural Processes on time series data. UAI 2021: 939-949 - [i9]Sarthak Pati, Ujjwal Baid, Maximilian Zenk, Brandon Edwards, Micah J. Sheller, G. Anthony Reina, Patrick Foley, Alexey Gruzdev, Jason Martin, Shadi Albarqouni, Yong Chen, Russell Taki Shinohara, Annika Reinke, David Zimmerer, John B. Freymann, Justin S. Kirby, Christos Davatzikos, Rivka R. Colen, Aikaterini Kotrotsou, Daniel S. Marcus, Mikhail Milchenko, Arash Nazeri, Hassan M. Fathallah-Shaykh, Roland Wiest, András Jakab, Marc-André Weber, Abhishek Mahajan, Lena Maier-Hein, Jens Kleesiek, Bjoern H. Menze, Klaus H. Maier-Hein, Spyridon Bakas:
The Federated Tumor Segmentation (FeTS) Challenge. CoRR abs/2105.05874 (2021) - [i8]Jens Petersen, Gregor Köhler, David Zimmerer, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein:
GP-ConvCNP: Better Generalization for Convolutional Conditional Neural Processes on Time Series Data. CoRR abs/2106.04967 (2021) - [i7]Jens Petersen, Fabian Isensee, Gregor Köhler, Paul F. Jäger, David Zimmerer, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Vollmuth, Klaus H. Maier-Hein:
Continuous-Time Deep Glioma Growth Models. CoRR abs/2106.12917 (2021) - 2020
- [c6]David Zimmerer, Fabian Isensee, Jens Petersen, Simon Kohl, Klaus H. Maier-Hein:
Abstract: Unsupervised Anomaly Localization Using Variational Auto-Encoders. Bildverarbeitung für die Medizin 2020: 199
2010 – 2019
- 2019
- [c5]Fabian Isensee, Jens Petersen, André Klein, David Zimmerer, Paul F. Jaeger, Simon Kohl, Jakob Wasserthal, Gregor Köhler, Tobias Norajitra, Sebastian J. Wirkert, Klaus H. Maier-Hein:
Abstract: nnU-Net: Self-adapting Framework for U-Net-Based Medical Image Segmentation. Bildverarbeitung für die Medizin 2019: 22 - [c4]David Zimmerer, Fabian Isensee, Jens Petersen, Simon Kohl, Klaus H. Maier-Hein:
Unsupervised Anomaly Localization Using Variational Auto-Encoders. MICCAI (4) 2019: 289-297 - [i6]David Zimmerer, Fabian Isensee, Jens Petersen, Simon Kohl, Klaus H. Maier-Hein:
Unsupervised Anomaly Localization using Variational Auto-Encoders. CoRR abs/1907.02796 (2019) - [i5]David Zimmerer, Jens Petersen, Klaus H. Maier-Hein:
High- and Low-level image component decomposition using VAEs for improved reconstruction and anomaly detection. CoRR abs/1911.12161 (2019) - [i4]David Zimmerer, Jens Petersen, Simon A. A. Kohl, Klaus H. Maier-Hein:
A Case for the Score: Identifying Image Anomalies using Variational Autoencoder Gradients. CoRR abs/1912.00003 (2019) - 2018
- [j1]Tobias Roß, David Zimmerer, Anant Suraj Vemuri, Fabian Isensee, Manuel Wiesenfarth, Sebastian Bodenstedt, Fabian Both, Philip Kessler, Martin Wagner, Beat Müller, Hannes Kenngott, Stefanie Speidel, Annette Kopp-Schneider, Klaus H. Maier-Hein, Lena Maier-Hein:
Exploiting the potential of unlabeled endoscopic video data with self-supervised learning. Int. J. Comput. Assist. Radiol. Surg. 13(6): 925-933 (2018) - [c3]Paul Jäger, Fabian Isensee, Jens Petersen, David Zimmerer, Jakob Wasserthal, Klaus Hermann Maier-Hein:
Advanced Deep Learning Methods. Bildverarbeitung für die Medizin 2018: 6 - [i3]Fabian Isensee, Jens Petersen, André Klein, David Zimmerer, Paul F. Jaeger, Simon Kohl, Jakob Wasserthal, Gregor Köhler, Tobias Norajitra, Sebastian J. Wirkert, Klaus H. Maier-Hein:
nnU-Net: Self-adapting Framework for U-Net-Based Medical Image Segmentation. CoRR abs/1809.10486 (2018) - [i2]David Zimmerer, Simon A. A. Kohl, Jens Petersen, Fabian Isensee, Klaus H. Maier-Hein:
Context-encoding Variational Autoencoder for Unsupervised Anomaly Detection. CoRR abs/1812.05941 (2018) - 2017
- [c2]Jacques Kaiser, David Zimmerer, Juan Camilo Vasquez Tieck, Stefan Ulbrich, Arne Roennau, Rüdiger Dillmann:
Spiking Convolutional Deep Belief Networks. ICANN (2) 2017: 3-11 - [i1]Tobias Roß, David Zimmerer, Anant Suraj Vemuri, Fabian Isensee, Sebastian Bodenstedt, Fabian Both, Philip Kessler, Martin Wagner, Beat Müller, Hannes Kenngott, Stefanie Speidel, Klaus H. Maier-Hein, Lena Maier-Hein:
Exploiting the potential of unlabeled endoscopic video data with self-supervised learning. CoRR abs/1711.09726 (2017) - 2016
- [c1]Florian Kuhnt, Micha Pfeiffer, Peter Zimmer, David Zimmerer, Jan-Markus Gomer, Vitali Kaiser, Ralf Kohlhaas, J. Marius Zöllner:
Robust environment perception for the Audi Autonomous Driving Cup. ITSC 2016: 1424-1431
Coauthor Index
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