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2020 – today
- 2022
[j27]Pengpai Li, Zhi-Ping Liu:
PST-PRNA: prediction of RNA-binding sites using protein surface topography and deep learning. Bioinform. 38(8): 2162-2168 (2022)- [j26]Yijuan Wang, Zhi-Ping Liu
:
Identifying biomarkers for breast cancer by gene regulatory network rewiring. BMC Bioinform. 22-S(12): 308 (2022) - [i2]Zhi-Ping Liu, Min-Gang Zhou, Wen-Bo Liu, Chen-Long Li, Jie Gu, Hua-Lei Yin, Zeng-Bing Chen:
Automated machine learning for secure key rate in discrete-modulated continuous-variable quantum key distribution. CoRR abs/2201.09419 (2022) - 2021
- [j25]Pengpai Li, Yongmei Hu, Zhi-Ping Liu:
Prediction of cardiovascular diseases by integrating multi-modal features with machine learning methods. Biomed. Signal Process. Control. 66: 102474 (2021) - [j24]Haixia Shang, Zhi-Ping Liu:
Prioritizing Type 2 Diabetes Genes by Weighted PageRank on Bilayer Heterogeneous Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 18(1): 336-346 (2021) - [c10]Na Yu, Zhi-Ping Liu, Rui Gao:
A Semi-Supervised Learning Algorithm for Predicting MiRNA-Disease Association. BIBM 2021: 771-774 - [c9]Guangyi Chen, Zhi-Ping Liu:
Inference of Gene Regulatory Network from Time Series Expression Data by Combining Local Geometric Similarity and Multivariate Regression. ICIC (3) 2021: 345-355 - 2020
- [j23]Haixia Shang, Zhi-Ping Liu:
Network-based prioritization of cancer genes by integrative ranks from multi-omics data. Comput. Biol. Medicine 119: 103692 (2020) - [c8]Yaohua Chang, Zhi-Ping Liu:
iNOA: An Improvement of Network Ontology Analysis with GO Semantic Similarity. ICBIP 2020: 56-61
2010 – 2019
- 2019
- [c7]Zishuang Zhang, Zhi-Ping Liu:
Identifying Cancer Biomarkers from High-Throughput RNA Sequencing Data by Machine Learning. ICIC (2) 2019: 517-528 - 2018
- [j22]Zhi-Ping Liu, Rui Gao:
Detecting pathway biomarkers of diabetic progression with differential entropy. J. Biomed. Informatics 82: 143-153 (2018) - [j21]Zhi-Ping Liu:
Towards precise reconstruction of gene regulatory networks by data integration. Quant. Biol. 6(2): 113-128 (2018) - 2017
- [j20]Zhi-Ping Liu, Shutang Liu, Ruitang Chen, Xiaopeng Huang, Ling-Yun Wu:
Structure alignment-based classification of RNA-binding pockets reveals regional RNA recognition motifs on protein surfaces. BMC Bioinform. 18(1): 27:1-27:13 (2017) - [j19]Xu Qiao, Xiaoqing Liu, Yen-Wei Chen, Zhi-Ping Liu:
Multi-dimensional data representation using linear tensor coding. IET Image Process. 11(7): 492-501 (2017) - 2016
- [j18]Guangyong Zheng, Yaochen Xu, Xiujun Zhang, Zhi-Ping Liu, Zhuo Wang, Luonan Chen, Xin-Guang Zhu:
CMIP: a software package capable of reconstructing genome-wide regulatory networks using gene expression data. BMC Bioinform. 17(S-17): 137-144 (2016) - [j17]Zhi-Ping Liu, Hongyu Miao:
Prediction of protein-RNA interactions using sequence and structure descriptors. Neurocomputing 206: 28-34 (2016) - 2015
- [j16]Zhi-Ping Liu, Canglin Wu, Hongyu Miao, Hulin Wu:
RegNetwork: an integrated database of transcriptional and post-transcriptional regulatory networks in human and mouse. Database J. Biol. Databases Curation 2015 (2015) - [j15]Xindong Zhang, Lin Gao, Zhi-Ping Liu, Luonan Chen:
Identifying module biomarker in type 2 diabetes mellitus by discriminative area of functional activity. BMC Bioinform. 16: 92:1-92:10 (2015) - [i1]Hui-Jia Li, Junhua Zhang, Zhi-Ping Liu, Luonan Chen, Xiang-Sun Zhang:
Identifying overlapping communities in social networks using multi-scale local information expansion. CoRR abs/1503.08024 (2015) - 2014
- [j14]Zhi-Ping Liu, Hulin Wu, Jian Zhu, Hongyu Miao:
Systematic identification of transcriptional and post-transcriptional regulations in human respiratory epithelial cells during influenza A virus infection. BMC Bioinform. 15: 336 (2014) - 2013
- [j13]Xiujun Zhang, Keqin Liu, Zhi-Ping Liu, Béatrice Duval, Jean-Michel Richer, Xing-Ming Zhao, Jin-Kao Hao, Luonan Chen:
NARROMI: a noise and redundancy reduction technique improves accuracy of gene regulatory network inference. Bioinform. 29(1): 106-113 (2013) - [j12]Zhenshu Wen, Zhi-Ping Liu, Zhengrong Liu, Yan Zhang, Luonan Chen:
Research and applications: An integrated approach to identify causal network modules of complex diseases with application to colorectal cancer. J. Am. Medical Informatics Assoc. 20(4): 659-667 (2013) - 2012
- [j11]Xiujun Zhang, Xing-Ming Zhao, Kun He, Le Lu, Yongwei Cao, Jingdong Liu, Jin-Kao Hao, Zhi-Ping Liu, Luonan Chen:
Inferring gene regulatory networks from gene expression data by path consistency algorithm based on conditional mutual information. Bioinform. 28(1): 98-104 (2012) - [j10]Keqin Liu, Zhi-Ping Liu, Jin-Kao Hao, Luonan Chen, Xing-Ming Zhao:
Identifying dysregulated pathways in cancers from pathway interaction networks. BMC Bioinform. 13: 126 (2012) - [j9]Zhi-Ping Liu, Jiguang Wang, Yu-Qing Qiu, Ross K. K. Leung, Xiang-Sun Zhang, Stephen Kwok-Wing Tsui, Luonan Chen:
Inferring a protein interaction map of Mycobacterium tuberculosis based on sequences and interologs. BMC Bioinform. 13(S-7): S6 (2012) - [j8]Guanying Piao, Shigeru Saito, Yidan Sun, Zhi-Ping Liu, Yong Wang, Xiao Han, Jiarui Wu, Huarong Zhou, Luonan Chen, Katsuhisa Horimoto:
A computational procedure for identifying master regulator candidates: a case study on diabetes progression in Goto-Kakizaki rats. BMC Syst. Biol. 6(S-1): S2 (2012) - [j7]Jianghua Zhang, Jin Li, Zhi-Ping Liu:
Multiple-resource and multiple-depot emergency response problem considering secondary disasters. Expert Syst. Appl. 39(12): 11066-11071 (2012) - [j6]Xiaoping Liu, Zhi-Ping Liu, Xing-Ming Zhao, Luonan Chen:
Identifying disease genes and module biomarkers by differential interactions. J. Am. Medical Informatics Assoc. 19(2): 241-248 (2012) - [c6]Zhi-Ping Liu, Wanwei Zhang, Katsuhisa Horimoto, Luonan Chen:
A Gaussian graphical model for identifying significantly responsive regulatory networks from time series gene expression data. ISB 2012: 142-147 - [c5]Yang Liu, Jin Zhou, Zhi-Ping Liu, Luonan Chen, Michael K. Ng:
Construction and analysis of genome-wide SNP networks. ISB 2012: 327-332 - 2011
- [j5]Huarong Zhou, Shigeru Saito, Guanying Piao, Zhi-Ping Liu, Jiguang Wang, Katsuhisa Horimoto, Luonan Chen:
Network screening of Goto-Kakizaki rat liver microarray data during diabetic progression. BMC Syst. Biol. 5(S-1): S16 (2011) - [c4]Zhi-Ping Liu, Jiguang Wang, Yu-Qing Qiu, Ross K. K. Leung, Xiang-Sun Zhang, Stephen Kwok-Wing Tsui, Luonan Chen:
Inferring Protein-Protein Interactions Based on Sequences and Interologs in Mycobacterium Tuberculosis. ICIC (3) 2011: 91-96 - 2010
- [j4]Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang, Luonan Chen:
Prediction of protein-RNA binding sites by a random forest method with combined features. Bioinform. 26(13): 1616-1622 (2010) - [j3]Zhi-Ping Liu, Yong Wang, Xiang-Sun Zhang, Luonan Chen:
Identifying dysfunctional crosstalk of pathways in various regions of Alzheimer's disease brains. BMC Syst. Biol. 4(S-2): S11 (2010) - [c3]Zhi-Ping Liu, Xiang-Sun Zhang, Luonan Chen:
Inferring gene regulatory networks from expression data with prior knowledge by linear programming. ICMLC 2010: 3067-3072
2000 – 2009
- 2009
- [c2]Zhi-Ping Liu, Yong Wang, Tieqiao Wen, Xiang-Sun Zhang, Weiming Xia, Luonan Chen:
Dynamically dysfunctional protein interactions in the development of Alzheimer's disease. SMC 2009: 4262-4267 - 2008
- [j2]Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang, Luonan Chen:
Protein cavity clustering based on community structure of pocket similarity network. Int. J. Bioinform. Res. Appl. 4(4): 445-460 (2008) - 2007
- [j1]Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Luonan Chen, Xiang-Sun Zhang:
Predicting gene ontology functions from protein's regional surface structures. BMC Bioinform. 8 (2007) - 2006
- [c1]Xiao-Yuan Wang, Hai-hong Liu, Zhi-Ping Liu:
Short-Time Traffic Flow Forecasting Based on Projection Pursuit Auto-Regression. ICICIC (1) 2006: 707-711
Coauthor Index
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