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ORCID9. WABI 2009: Philadelphia, PA, USA
- Steven Salzberg, Tandy J. Warnow:
Algorithms in Bioinformatics, 9th International Workshop, WABI 2009, Philadelphia, PA, USA, September 12-13, 2009. Proceedings. Lecture Notes in Computer Science 5724, Springer 2009, ISBN 978-3-642-04240-9 - Paola Bonizzoni
, Gianluca Della Vedova, Riccardo Dondi, Yuri Pirola, Raffaella Rizzi:
Minimum Factorization Agreement of Spliced ESTs. 1-12 - Sebastian Böcker, Florian Rasche, Tamara Steijger:
Annotating Fragmentation Patterns. 13-24 - Hamidreza Chitsaz, Rolf Backofen, Süleyman Cenk Sahinalp:
biRNA: Fast RNA-RNA Binding Sites Prediction. 25-36 - Phuong Dao, Alexander Schönhuth, Fereydoun Hormozdiari, Iman Hajirasouliha, Süleyman Cenk Sahinalp, Martin Ester:
Quantifying Systemic Evolutionary Changes by Color Coding Confidence-Scored PPI Networks. 37-48 - Daniel DeBlasio, Jocelyne Bruand, Shaojie Zhang:
PMFastR: A New Approach to Multiple RNA Structure Alignment. 49-61 - Pietro di Lena, Piero Fariselli, Luciano Margara, Marco Vassura, Rita Casadio:
On the Upper Bound of the Prediction Accuracy of Residue Contacts in Proteins with Correlated Mutations: The Case Study of the Similarity Matrices. 62-72 - Jianrong Dong, David Fernández-Baca, Fred R. McMorris:
Constructing Majority-Rule Supertrees. 73-84 - Pedro Feijão, João Meidanis:
SCJ: A Variant of Breakpoint Distance for Which Sorting, Genome Median and Genome Halving Problems Are Easy. 85-96 - Yelena Frid, Dan Gusfield:
A Simple, Practical and Complete O(\fracn3 logn)O(\frac{n^3}{ \log n})-Time Algorithm for RNA Folding Using the Four-Russians Speedup. 97-107 - Marta Gîrdea, Laurent Noé, Gregory Kucherov:
Back-Translation for Discovering Distant Protein Homologies. 108-120 - Timothy Hancock, Hiroshi Mamitsuka:
A Markov Classification Model for Metabolic Pathways. 121-132 - Matthew Hansen, Logan Everett, Larry N. Singh, Sridhar Hannenhalli:
Mimosa: Mixture Model of Co-expression to Detect Modulators of Regulatory Interaction. 133-144 - Peter Husemann, Jens Stoye:
Phylogenetic Comparative Assembly. 145-156 - Minghui Jiang, Pedro J. Tejada, Ramoni O. Lasisi, Shanhong Cheng, D. Scott Fechser:
K-Partite RNA Secondary Structures. 157-168 - Crystal L. Kahn, Shay Mozes, Benjamin J. Raphael:
Efficient Algorithms for Analyzing Segmental Duplications, Deletions, and Inversions in Genomes. 169-180 - Jakub Kovác, Tomás Vinar, Brona Brejová:
Predicting Gene Structures from Multiple RT-PCR Tests. 181-193 - Thomas Greve Kristensen, Jesper Buus Nielsen, Christian N. S. Pedersen:
A Tree Based Method for the Rapid Screening of Chemical Fingerprints. 194-205 - Fumei Lam, Dan Gusfield, Srinath Sridhar:
Generalizing the Four Gamete Condition and Splits Equivalence Theorem: Perfect Phylogeny on Three State Characters. 206-219 - Qian Peng, Max A. Alekseyev, Glenn Tesler, Pavel A. Pevzner:
Decoding Synteny Blocks and Large-Scale Duplications in Mammalian and Plant Genomes. 220-232 - Pasi Rastas:
A General Framework for Local Pairwise Alignment Statistics with Gaps. 233-245 - Eric Rivals, Leena Salmela, Petteri Kiiskinen, Petri Kalsi, Jorma Tarhio:
mpscan: Fast Localisation of Multiple Reads in Genomes. 246-260 - Raheleh Salari, Rolf Backofen, Süleyman Cenk Sahinalp:
Fast Prediction of RNA-RNA Interaction. 261-272 - Saeed Salem, Mohammed J. Zaki, Chris Bystroff:
FlexSnap: Flexible Non-sequential Protein Structure Alignment. 273-285 - Kengo Sato, Michiaki Hamada, Toutai Mituyama, Kiyoshi Asai, Yasubumi Sakakibara:
A Non-parametric Bayesian Approach for Predicting RNA Secondary Structures. 286-297 - Marcel H. Schulz, Sebastian Köhler, Sebastian Bauer, Martin Vingron, Peter N. Robinson:
Exact Score Distribution Computation for Similarity Searches in Ontologies. 298-309 - Tetsuo Shibuya, Jesper Jansson, Kunihiko Sadakane:
Linear-Time Protein 3-D Structure Searching with Insertions and Deletions. 310-320 - Kenneth Sundberg, Mark J. Clement, Quinn Snell:
Visualizing Phylogenetic Treespace Using Cartographic Projections. 321-332 - M. Shel Swenson, François Barbançon, C. Randal Linder, Tandy J. Warnow:
A Simulation Study Comparing Supertree and Combined Analysis Methods Using SMIDGen. 333-344 - Fadi Towfic, M. Heather West Greenlee, Vasant G. Honavar:
Aligning Biomolecular Networks Using Modular Graph Kernels. 345-361 - Roberto Grossi, Andrea Pietracaprina, Nadia Pisanti, Geppino Pucci, Eli Upfal, Fabio Vandin:
MADMX: A Novel Strategy for Maximal Dense Motif Extraction. 362-374 - Travis J. Wheeler:
Large-Scale Neighbor-Joining with NINJA. 375-389 - Thomas K. F. Wong, Tak Wah Lam, Wing-Kin Sung, Siu-Ming Yiu:
Structural Alignment of RNA with Complex Pseudoknot Structure. 403-414 - Xiuwei Zhang, Bernard M. E. Moret:
Improving Inference of Transcriptional Regulatory Networks Based on Network Evolutionary Models. 415-428
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