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ORCIDSWAT4LS 2014: Berlin, Germany
- Adrian Paschke, Albert Burger, Paolo Romano, M. Scott Marshall, Andrea Splendiani:
Proceedings of the 7th International Workshop on Semantic Web Applications and Tools for Life Sciences, Berlin, Germany, December 9-11, 2014. CEUR Workshop Proceedings 1320, CEUR-WS.org 2014 - Yasar Khan, Muhammad Saleem, Aftab Iqbal, Muntazir Mehdi, Aidan Hogan, Axel-Cyrille Ngonga Ngomo, Stefan Decker, Ratnesh Sahay:
SAFE: Policy Aware SPARQL Query Federation Over RDF Data Cubes. - Soumia Melzi, Clément Jonquet:
Scoring Semantic Annotations Returned by The NCBO Annotator. - Angel Esteban-Gil, Jesualdo Tomás Fernández-Breis, Martin Boeker:
Analysis and Visualization of Disease Courses in a Semantic Enabled Cancer Registry. - Yasunori Yamamoto:
A SPARQL Endpoint Profiler for an Efficient Question Answering System. - Guoqian Jiang, Deepak K. Sharma, Harold R. Solbrig, Cui Tao, Chunhua Weng, Christopher G. Chute:
Building a Semantic Web-based Metadata Repository for Facilitating Detailed Clinical Modeling in Cancer Genome Studies. - Efthymios Chondrogiannis, Vassiliki Andronikou, Efstathios Karanastasis, Theodora A. Varvarigou:
An Intelligent Ontology Alignment Tool Dealing with Complicated Mismatches. - Vassilis Koutkias, Marie-Christine Jaulent:
Leveraging Post-marketing Drug Safety Research through Semantic Technologies: The PharmacoVigilance Signal Detectors Ontology. - Daniel Schober, Rémy Choquet, Kristof Depraetere, Frank Enders, Philipp Daumke, Marie-Christine Jaulent, Douglas Teodoro, Emilie Pasche, Christian Lovis, Martin Boeker:
DebugIT: Ontology-mediated Layered Data Integration for Real-time Antibiotics Resistance Surveillance.
Position Papers
- W. Jim Zheng, Jingcheng Du, Jijun Tang, Cui Tao:
GSO: A Semantic Web Ontology to Capture 3D Genome Structure. - Syed Ahmad Chan Bukhari, Michael Krauthammer, Christopher J. O. Baker:
SEBI: An Architecture for Biomedical Image Discovery, Interoperability and Reusability Based on Semantic Enrichment.
Short Papers
- Cui Tao, Nnaemeka Okafor, Amit M. Mehta, Charles L. Maddow, David J. Robinson, Brent King, Jiajie Zhang, Amy Franklin:
A Work Domain Ontology for Modeling Emergency Department Workflow. - Pablo López-García, Stefan Schulz, Roman Kern:
Automatic Summarization for Terminology Recommendation: The Case of the NCBO Ontology Recommender. - Katerina Gkirtzou, Thanasis Vergoulis, Artemis G. Hatzigeorgiou, Timos K. Sellis, Theodore Dalamagas:
Publishing Diachronic Life Science Linked Data. - André Freitas, Kartik Asooja, Joao Jares, Stefan Decker, Ratnesh Sahay:
A Semantic Web Platform for Automating the Interpretation of Finite Element Bio-simulations.
Posters
- Soumia Melzi, Clément Jonquet:
Representing NCBO Annotator Results in Standard RDF with the Annotation Ontology. - Marco Roos, Alasdair J. G. Gray, Andra Waagmeester, Mark Thompson, Rajaram Kaliyaperumal, Eelke van der Horst, Barend Mons, Mark D. Wilkinson:
Bring Your Own Data Workshops: A Mechanism to Aid Data Owners to Comply with Linked Data Best Practices. - Rajaram Kaliyaperumal, Peter Bram 't Hoen, Mark Thompson, Eelke van der Horst, Marco Roos:
Genome Annotation using Nanopublications: An Approach to Interoperability of Genetic Data. - Norio Kobayashi, Kai Lenz, Hongyan Wu, Kouji Kozaki, Atsuko Yamaguchi:
Prototype Implementation of SPARQL Builder for Life-science Databases by Intelligent Schema Analysis on RDF datasets. - Christian Rosenke, Dagmar Waltemath:
How Can Semantic Annotations Support the Identification of Network Similarities? - Nihad Omerbegovic, Nedim Omerbegovic, Abdulhamit Subasi:
Effects of Two-way Data Binding on Better User Experience and Easier Development of Clinical Information Systems. - Robert Hoehndorf, Luke T. Slater, Paul N. Schofield, Georgios V. Gkoutos:
Aber-OWL: A Framework for Ontology-based Data Access in Biology.
Demos
- Bernardo Cuenca Grau, Evgeny Kharlamov, Sarunas Marciuska, Dmitriy Zheleznyakov, Yujiao Zhou:
Querying Life Science Ontologies with SemFacet. - Paolo Ciccarese, Tim Clark:
Annotopia: An Open Source Universal Annotation Server for Biomedical Research. - Timo Böhme, Matthias Irmer, Anett Püschel, Claudia Bobach, Ulf Laube, Lutz Weber:
OCMiner: Text Processing, Annotation and Relation Extraction for the Life Sciences. - Martynas Jusevicius:
Graphity: Generic Processor for Declarative Linked Data Applications. - Emily Merrill, Shannan J. Ho Sui, Stephane Corlosquet, Tim Clark, Sudeshna Das:
Using eXframe to Build Semantic Web Genomics Repositories. - Ron Henkel, Dagmar Waltemath:
MaSyMoS: Finding Hidden Treasures in Model Repositories. - Toshiaki Katayama:
D3SPARQL: JavaScript Library for Visualization of SPARQL Results. - Andreas Schwarte, Hanka Venselaar, Peter Haase, Gert Vriend:
The NewProt Self-Service Portal for Protein Engineering. - Martin Scharm, Florian Wendland, Martin Peters, Markus Wolfien, Tom Theile, Dagmar Waltemath:
The CombineArchiveWeb Application - A Web-based Tool to Handle Files Associated with Modelling Results.
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