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2020 – today
- 2023
- [c121]Muhammad Amith
, Licong Cui
, Kirk Roberts
, Cui Tao
:
Application of an ontology for model cards to generate computable artifacts for linking machine learning information from biomedical research. WWW (Companion Volume) 2023: 820-825 - [i11]Muhammad Amith, Licong Cui, Kirk Roberts, Cui Tao:
Application of an ontology for model cards to generate computable artifacts for linking machine learning information from biomedical research. CoRR abs/2303.11991 (2023) - 2022
- [j76]Warren Manuel, Rashmie Abeysinghe, Yongqun He, Cui Tao, Licong Cui:
Identification of missing hierarchical relations in the vaccine ontology using acquired term pairs. J. Biomed. Semant. 13(1): 22 (2022) - [j75]Muhammad Tuan Amith, Licong Cui, Degui Zhi, Kirk Roberts, Xiaoqian Jiang, Fang Li, Evan Yu, Cui Tao
:
Toward a standard formal semantic representation of the model card report. BMC Bioinform. 23(1): 281 (2022) - [j74]Yi Nian, Xinyue Hu, Rui Zhang, Jingna Feng, Jingcheng Du, Fang Li, Larry Bu, Yuji Zhang, Yong Chen, Cui Tao
:
Mining on Alzheimer's diseases related knowledge graph to identity potential AD-related semantic triples for drug repurposing. BMC Bioinform. 23-S(6): 407 (2022) - [c120]Mark A. Musen, Jiang Bian, Bruce Chorpita, Vimla Patel, Cui Tao:
Ontologies in the Behavioral Sciences: Accelerating Research and the Accessibility and Use of Knowledge. AMIA 2022 - [c119]Evan Yu, Cui Tao, Jingcheng Du, Degui Zhi, Yang Xiang, Kayo Fujimoto, Xi Luo, John A. Schneider:
Combining Transfer Learning with Graph Attention Models for HIV Risk Prediction. AMIA 2022 - [c118]Jianping He, Fang Li, Xinyue Hu, Jianfu Li, Yi Nian, Jingqi Wang, Yang Xiang, Qiang Wei, Hua Xu, Cui Tao:
Chemical-Protein Relation Extraction with Pre-trained Prompt Tuning. ICHI 2022: 608-609 - [i10]Yi Nian, Xinyue Hu, Rui Zhang, Jingna Feng, Jingcheng Du, Fang Li, Yong Chen, Cui Tao:
Mining On Alzheimer's Diseases Related Knowledge Graph to Identity Potential AD-related Semantic Triples for Drug Repurposing. CoRR abs/2202.08712 (2022) - [i9]Yifang Dang, Fang Li, Xinyue Hu, Vipina Kuttichi Keloth, Meng Zhang, Sunyang Fu, Jingcheng Du, J. Wilfred Fan, Muhammad F. Amith, Evan Yu, Hongfang Liu, Xiaoqian Jiang, Hua Xu, Cui Tao:
Systematic Design and Evaluation of Social Determinants of Health Ontology (SDoHO). CoRR abs/2212.01941 (2022) - 2021
- [j73]Jingcheng Du
, Yang Xiang
, Madhuri Sankaranarayanapillai, Meng Zhang, Jingqi Wang, Yuqi Si
, Huy Anh Pham, Hua Xu
, Yong Chen, Cui Tao
:
Extracting postmarketing adverse events from safety reports in the vaccine adverse event reporting system (VAERS) using deep learning. J. Am. Medical Informatics Assoc. 28(7): 1393-1400 (2021) - [j72]Jingcheng Du
, Qing Wang, Jingqi Wang, Prerana Ramesh, Yang Xiang
, Xiaoqian Jiang
, Cui Tao
:
COVID-19 trial graph: a linked graph for COVID-19 clinical trials. J. Am. Medical Informatics Assoc. 28(9): 1964-1969 (2021) - [j71]Muhammad Amith
, Chidinma Onye, Tracey Ledoux, Grace Xiong
, Cui Tao
:
The ontology of fast food facts: conceptualization of nutritional fast food data for consumers and semantic web applications. BMC Medical Informatics Decis. Mak. 21-S(7): 275 (2021) - [j70]Laila Rasmy
, Yang Xiang
, Ziqian Xie, Cui Tao
, Degui Zhi
:
Med-BERT: pretrained contextualized embeddings on large-scale structured electronic health records for disease prediction. npj Digit. Medicine 4 (2021) - [c117]Muhammad Amith, Marcelline R. Harris, Cooper Stansbury, Kathleen Ford, Frank J. Manion, Cui Tao:
Expressing and Executing Informed Consent Permissions using SWRL: The All of Us Use Case. AMIA 2021 - [c116]Daniel J. Stone, Sijia Liu, Yuan Luo, Andrew Wen, Nansu Zong, Luke V. Rasmussen, Prakash Adekkanattu, Pascal S. Brandt, Jennifer A. Pacheco, Fei Wang, Cui Tao, Jyotishman Pathak, Hongfang Liu, Guoqian Jiang:
FHIRTime: Standardizing Temporal Patterns Identified from Clinical Narratives Using HL7 FHIR. AMIA 2021 - [c115]Yunpeng Zhao, Pengfei Yin, Yongqiu Li, Xing He, Jingcheng Du, Cui Tao, Yi Guo, Mattia C. F. Prosperi, Pierangelo Veltri, Xi Yang, Yonghui Wu, Jiang Bian:
Data and Model Biases in Social Media Analyses: A Case Study of COVID-19 Tweets. AMIA 2021 - [c114]Rebecca Z. Lin
, Muhammad Tuan Amith, Xinyuan Zhang, Cynthia Wang, Jeremy Light, John Strickley, Cui Tao:
Developing Ontologies to Standardize Descriptions of Visual and Dermoscopic Elements. BIBM 2021: 1813-1817 - [c113]Patricia Ngantcha, Muhammad "Tuan" Amith, Kirk Roberts, John A. Valenza, Muhammad Walji
, Cui Tao:
Dental EHR-infused Persona Ontologies to Enrich Dental Dialogue Interaction of Agents. BIBM 2021: 1818-1825 - [c112]Anna Zhu, Muhammad Amith, Lu Tang, Rachel Cunningham, Angela Xu, Julie A. Boom, Cui Tao:
Experimenting with a Prototype Interactive Narrative Game to Improve Knowledge and Beliefs for the HPV Vaccine. HCI (43) 2021: 186-201 - [c111]Patricia Ngantcha
, Muhammad Amith
, Cui Tao
, Kirk Roberts:
Patient-Provider Communication Training Models for Interactive Speech Devices. HCI (16) 2021: 250-268 - [c110]Samuel Wang, Jingcheng Du, Lu Tang, Cui Tao:
Understanding Public Perceptions of Measles from Twitter Using Multi-Task Convolutional Neural Networks. MedInfo 2021: 607-611 - [i8]Muhammad Amith, Marcelline R. Harris, Cooper Stansbury, Kathleen Ford, Frank J. Manion, Cui Tao:
Expressing and Executing Informed Consent Permissions Using SWRL: The All of Us Use Case. CoRR abs/2108.10221 (2021) - [i7]Yi Nian, Jingcheng Du, Larry Bu, Fang Li, Xinyue Hu, Yuji Zhang, Cui Tao:
Knowledge Graph-based Neurodegenerative Diseases and Diet Relationship Discovery. CoRR abs/2109.06123 (2021) - 2020
- [j69]Qiang Wei
, Yaoyun Zhang, Muhammad Amith
, Rebecca Lin
, Jenay Lapeyrolerie, Cui Tao
, Hua Xu:
Recognizing software names in biomedical literature using machine learning. Health Informatics J. 26(1) (2020) - [j68]Jiang Bian, Yaoyun Zhang, Cui Tao
:
Exploring the semantics in mental health research. Health Informatics J. 26(2): 723-725 (2020) - [j67]Fang Li
, Guozheng Rao
, Jingcheng Du, Yang Xiang, Yaoyun Zhang, Salih Selek
, Jane Elizabeth Hamilton, Hua Xu, Cui Tao
:
Ontological representation-oriented term normalization and standardization of the Research Domain Criteria. Health Informatics J. 26(2): 726-737 (2020) - [j66]Jianhong Luo
, Jingcheng Du, Cui Tao
, Hua Xu, Yaoyun Zhang:
Exploring temporal suicidal behavior patterns on social media: Insight from Twitter analytics. Health Informatics J. 26(2): 738-752 (2020) - [j65]Rui Duan, Xinyuan Zhang, Jingcheng Du, Jing Huang, Cui Tao
, Yong Chen:
On the evidence consistency of pharmacovigilance outcomes between Food and Drug Administration Adverse Event Reporting System and electronic medical record data for acute mania patients. Health Informatics J. 26(2): 753-764 (2020) - [j64]Qiang Wei
, Zongcheng Ji, Zhiheng Li, Jingcheng Du, Jingqi Wang, Jun Xu, Yang Xiang, Firat Tiryaki, Stephen Wu, Yaoyun Zhang, Cui Tao
, Hua Xu:
A study of deep learning approaches for medication and adverse drug event extraction from clinical text. J. Am. Medical Informatics Assoc. 27(1): 13-21 (2020) - [j63]Hansi Zhang, Christopher Wheldon
, Adam G. Dunn
, Cui Tao
, Jinhai Huo, Rui Zhang, Mattia C. F. Prosperi, Yi Guo, Jiang Bian:
Mining Twitter to assess the determinants of health behavior toward human papillomavirus vaccination in the United States. J. Am. Medical Informatics Assoc. 27(2): 225-235 (2020) - [j62]Rubina F. Rizvi, Jake Vasilakes, Terrence J. Adam, Genevieve B. Melton
, Jeffrey R. Bishop, Jiang Bian, Cui Tao
, Rui Zhang:
iDISK: the integrated DIetary Supplements Knowledge base. J. Am. Medical Informatics Assoc. 27(4): 539-548 (2020) - [j61]Fang Li, Jingcheng Du, Yongqun He, Hsing-yi Song, Mohcine Madkour, Guozheng Rao, Yang Xiang, Yi Luo, Henry W. Chen, Sijia Liu, Liwei Wang, Hongfang Liu, Hua Xu, Cui Tao:
Time event ontology (TEO): to support semantic representation and reasoning of complex temporal relations of clinical events. J. Am. Medical Informatics Assoc. 27(7): 1046-1056 (2020) - [j60]Laila Rasmy
, Firat Tiryaki, Yujia Zhou, Yang Xiang, Cui Tao
, Hua Xu
, Degui Zhi:
Representation of EHR data for predictive modeling: a comparison between UMLS and other terminologies. J. Am. Medical Informatics Assoc. 27(10): 1593-1599 (2020) - [j59]Muhammad Amith
, Rebecca Lin, Licong Cui, Dennis Wang, Anna Zhu, Grace Xiong
, Hua Xu, Kirk Roberts, Cui Tao
:
Conversational ontology operator: patient-centric vaccine dialogue management engine for spoken conversational agents. BMC Medical Informatics Decis. Mak. 20-S(4): 259 (2020) - [j58]Li Zhang, Jiamei Hu, Qianzhi Xu, Fang Li, Guozheng Rao
, Cui Tao
:
A semantic relationship mining method among disorders, genes, and drugs from different biomedical datasets. BMC Medical Informatics Decis. Mak. 20-S(4): 283 (2020) - [j57]Zhe He
, Cui Tao
, Jiang Bian, Rui Zhang:
Selected articles from the Fourth International Workshop on Semantics-Powered Data Mining and Analytics (SEPDA 2019). BMC Medical Informatics Decis. Mak. 20-S(4): 315 (2020) - [j56]Muhammad Amith
, Kayo Fujimoto, Rebecca Mauldin
, Cui Tao
:
Friend of a Friend with Benefits ontology (FOAF+): extending a social network ontology for public health. BMC Medical Informatics Decis. Mak. 20-S(10): 269 (2020) - [c109]Rui Duan, Zhaoyi Chen, Jiayi Tong, Chongliang Luo, Tianchen Lyu, Cui Tao, Demetrius Maraganore, Jiang Bian, Yong Chen:
Leverage Real-World Longitudinal Data in Large Clinical Research Networks for Alzheimer's Disease and Related Dementia (ADRD). AMIA 2020 - [c108]Jiayi Tong, Zhaoyi Chen, Rui Duan, Wei-Hsuan Lo-Ciganic, Tianchen Lyu, Cui Tao, Peter A. Merkel, Henry R. Kranzler, Jiang Bian, Yong Chen:
Identifying Clinical Risk Factors for Opioid Use Disorder using a Distributed Algorithm to Combine Real-World Data from a Large Clinical Data Research Network. AMIA 2020 - [c107]Muhammad Amith
, Jing Wang, Grace Xiong
, Kirk Roberts, Cui Tao
:
A health consumer ontology of fast food information. BIBM 2020: 1714-1719 - [c106]Angela Xu, Muhammad Amith
, Jianfu Li, Lu Tang, Cui Tao:
An Interactive Game for Changing Youth Behavior Regarding E-cigarettes. HCI (38) 2020: 512-518 - [c105]Juan Li, Rasha Hendawi, Vikram Pandey, Rafa Alenezi, Xin Wang, Bo Xie, Cui Tao:
Development and Evaluation of ADCareOnto - an Ontology for Personalized Home Care for Persons with Alzheimer's Disease. HealthCom 2020: 1-6 - [c104]Qiang Wei, Yujia Zhou, Bo Zhao, Xinyue Hu, Qiaozhu Mei, Cui Tao, Hua Xu:
Named Entity Recognition from Table Headers in Randomized Controlled Trial Articles. ICHI 2020: 1-2 - [i6]Muhammad Amith, Rebecca Lin, Rachel Cunningham, Qiwei Luna Wu, Lara S. Savas, Yang Gong, Julie A. Boom, Lu Tang, Cui Tao:
Examining Potential Usability and Health Beliefs Among Young Adults Using a Conversational Agent for HPV Vaccine Counseling. CoRR abs/2001.02306 (2020) - [i5]Laila Rasmy
, Yang Xiang, Ziqian Xie, Cui Tao, Degui Zhi:
Med-BERT: pre-trained contextualized embeddings on large-scale structured electronic health records for disease prediction. CoRR abs/2005.12833 (2020) - [i4]Mohcine Madkour, Keith A. Butler, Eric Mercer, Ali Bahrami, Cui Tao:
Semantic based model of Conceptual Work Products for formal verification of complex interactive systems. CoRR abs/2008.01623 (2020)
2010 – 2019
- 2019
- [j55]Junguk Hur
, Cui Tao
, Yongqun He
:
A 2018 workshop: vaccine and drug ontology studies (VDOS 2018). BMC Bioinform. 20-S(21): 705 (2019) - [j54]Muhammad Amith
, Kirk Roberts, Cui Tao
:
Conceiving an application ontology to model patient human papillomavirus vaccine counseling for dialogue management. BMC Bioinform. 20-S(21): 706 (2019) - [j53]Yang Xiang, Kayo Fujimoto, John A. Schneider, Yuxi Jia, Degui Zhi, Cui Tao
:
Network context matters: graph convolutional network model over social networks improves the detection of unknown HIV infections among young men who have sex with men. J. Am. Medical Informatics Assoc. 26(11): 1263-1271 (2019) - [j52]Jingcheng Du, Qingyu Chen, Yifan Peng
, Yang Xiang, Cui Tao
, Zhiyong Lu:
ML-Net: multi-label classification of biomedical texts with deep neural networks. J. Am. Medical Informatics Assoc. 26(11): 1279-1285 (2019) - [j51]Guocai Chen, Yuxi Jia, Lisha Zhu, Ping Li, Lin Zhang, Cui Tao
, W. Jim Zheng:
Gene fingerprint model for literature based detection of the associations among complex diseases: a case study of COPD. BMC Medical Informatics Decis. Mak. 19-S(1): 20:1-20:9 (2019) - [j50]Yaoyun Zhang, Cui Tao
, Yang Gong, Kai Wang, Zhongming Zhao:
The International Conference on Intelligent Biology and Medicine 2018: Medical Informatics Thematic Track (MedicalInfo2018). BMC Medical Informatics Decis. Mak. 19-S(1): 21:1-21:3 (2019) - [j49]Yang Xiang, Jun Xu, Yuqi Si
, Zhiheng Li, Laila Rasmy
, Yujia Zhou, Firat Tiryaki, Fang Li, Yaoyun Zhang, Yonghui Wu, Xiaoqian Jiang, W. Jim Zheng, Degui Zhi, Cui Tao
, Hua Xu:
Time-sensitive clinical concept embeddings learned from large electronic health records. BMC Medical Informatics Decis. Mak. 19-S(2): 139-148 (2019) - [j48]Jing Huang, Xinyuan Zhang, Jiayi Tong, Jingcheng Du, Rui Duan, Liu Yang
, Jason H. Moore, Cui Tao
, Yong Chen:
Comparing drug safety of hepatitis C therapies using post-market data. BMC Medical Informatics Decis. Mak. 19-S(4): 147:1-147:12 (2019) - [j47]Zhe He
, Jiang Bian, Cui Tao
, Rui Zhang:
Selected articles from the Third International Workshop on Semantics-Powered Data Analytics (SEPDA 2018). BMC Medical Informatics Decis. Mak. 19-S(4): 148:1-148:3 (2019) - [j46]Muhammad Amith
, Frank J. Manion, Chen Liang, Marcelline R. Harris, Dennis Wang, Yongqun He
, Cui Tao
:
Architecture and usability of OntoKeeper, an ontology evaluation tool. BMC Medical Informatics Decis. Mak. 19-S(4): 152:1-152:18 (2019) - [j45]Jingcheng Du
, Rachel Cunningham, Yang Xiang
, Fang Li
, Yuxi Jia
, Julie A. Boom, Sahiti Myneni, Jiang Bian
, Chongliang Luo
, Yong Chen, Cui Tao
:
Leveraging deep learning to understand health beliefs about the Human Papillomavirus Vaccine from social media. npj Digit. Medicine 2 (2019) - [c103]Marcelline R. Harris, Frank J. Manion, Madhuri Sankaranarayanapillai, Hsing-yi Song, Marisa Conte, Cui Tao:
A Scoping Review to Identify Biobank Classification and Permissions to Share Metadata. AMIA 2019 - [c102]Jonathan M. Vajda, J. Neil Otte, Cooper Stansbury, Marcelline R. Harris, Frank J. Manion, Cui Tao:
Refactoring and Expanding the Informed Consent Ontology (ICO). AMIA 2019 - [c101]Jonathan M. Vajda, J. Neil Otte, Cooper Stansbury, Marcelline R. Harris, Elizabeth Umberfield, Frank J. Manion, Cui Tao:
Expanding the Representation of Permissions and Deontic Roles in the Informed Consent Ontology (ICO). AMIA 2019 - [c100]Qiang Wei, Zongcheng Ji, Yuqi Si, Jingcheng Du, Jingqi Wang, Firat Tiryaki, Stephen Wu, Cui Tao, Kirk Roberts, Hua Xu:
Relation Extraction from Clinical Narratives Using Pre-trained Language Models. AMIA 2019 - [c99]Muhammad Amith
, Licong Cui, Kirk Roberts, Hua Xu, Cui Tao:
Ontology of Consumer Health Vocabulary: providing a formal and interoperable semantic resource for linking lay language and medical terminology. BIBM 2019: 1177-1178 - [c98]Muhammad Tuan Amith
, Kayo Fujimoto, Cui Tao
:
NET-EXPO: A Gephi Plugin Towards Social Network Analysis of Network Exposure for Unipartite and Bipartite Graphs. HCI (35) 2019: 3-12 - [c97]Bikesh Maharjan, Juan Li, Jun Kong, Cui Tao:
Alexa, What Should I Eat? : A Personalized Virtual Nutrition Coach for Native American Diabetes Patients Using Amazon's Smart Speaker Technology. HealthCom 2019: 1-6 - [c96]Jonathan M. Vajda, J. Neil Otte, Cooper Stansbury, Frank J. Manion, Marcelline R. Harris, Cui Tao:
Using Stases to Enrich Queries for When and Where Regulations Are in Force. ICBO 2019: 1 - [c95]Fang Li, Mingqiang Wang, Huy Anh Pham, Yang Xiang, Muhammad Tuan Amith
, Cui Tao, Jingcheng Du, Guozheng Rao:
Systematic Design of Drug Repurposing-Oriented Alzheimer's Disease Ontology. ICHI 2019: 1-5 - [c94]Muhammad Amith
, Anna Zhu, Rachel Cunningham, Rebecca Lin
, Lara S. Savas
, Laura Shay, Yong Chen, Yang Gong, Julie Boom, Kirk Roberts, Cui Tao:
Early Usability Assessment of a Conversational Agent for HPV Vaccination. ITCH 2019: 17-23 - [c93]Ergin Soysal, Jeremy L. Warner, Jingqi Wang, Min Jiang, Krysten Harvey, Sandeep Kumar Jain, Xiao Dong, Hsing-yi Song, Harish Siddhanamatha, Liwei Wang, Qi Dai, Qingxia Chen, Xianglin Du, Cui Tao
, Ping Yang, Joshua Charles Denny, Hongfang Liu, Hua Xu:
Developing Customizable Cancer Information Extraction Modules for Pathology Reports Using CLAMP. MedInfo 2019: 1041-1045 - [c92]Graciela Gonzalez, Zhiyong Lu, Robert Leaman, Davy Weissenbacher, Mary Regina Boland, Yong Chen, Jingcheng Du, Juliane Fluck, Casey S. Greene, John H. Holmes, Aditya Kashyap, Rikke Linnemann Nielsen, Zhengqing Ouyang, Sebastian Schaaf, Jaclyn N. Taroni, Cui Tao, Yuping Zhang, Hongfang Liu:
Text Mining and Machine Learning for Precision Medicine. PSB 2019: 449-454 - [c91]Muhammad Amith, Rebecca Lin, Licong Cui, Dennis Wang, Anna Zhu, Grace Xiong, Hua Xu, Kirk Roberts, Cui Tao:
An Ontology-Powered Dialogue Engine For Patient Communication of Vaccines. SEPDA@ISWC 2019: 24-30 - [c90]Guozheng Rao, Li Zhang, Xiaowang Zhang, Wenwen Li, Fang Li, Cui Tao:
A Multi-Source Linked Open Data Fusion Method for Gene Disorder Drug Relationship Querying. SEPDA@ISWC 2019: 31-35 - [e5]Zhe He, Jiang Bian, Cui Tao, Rui Zhang:
Proceedings of the 4th International Workshop on Semantics-Powered Data Mining and Analytics co-located with the 18th International Semantic Web Conference (ISWC 2019), Aukland, New Zealand, October 27, 2019. CEUR Workshop Proceedings 2427, CEUR-WS.org 2019 [contents] - [i3]Jingcheng Du, Chongliang Luo, Qiang Wei, Yong Chen, Cui Tao:
Exploring difference in public perceptions on HPV vaccine between gender groups from Twitter using deep learning. CoRR abs/1907.03167 (2019) - [i2]Hansi Zhang, Christopher Wheldon, Adam G. Dunn, Cui Tao, Jinhai Huo, Rui Zhang, Mattia C. F. Prosperi, Yi Guo, Jiang Bian:
Mining Twitter to Assess the Determinants of Health Behavior towards Human Papillomavirus Vaccination in the United States. CoRR abs/1907.11624 (2019) - 2018
- [j44]Muhammad Amith
, Cui Tao
:
Representing vaccine misinformation using ontologies. J. Biomed. Semant. 9(1): 22:1-22:13 (2018) - [j43]Li Wang
, Yaoyun Zhang, Min Jiang, Jingqi Wang, Jiancheng Dong
, Yun Liu, Cui Tao
, Guoqian Jiang, Yi Zhou, Hua Xu:
Toward a normalized clinical drug knowledge base in China - applying the RxNorm model to Chinese clinical drugs. J. Am. Medical Informatics Assoc. 25(7): 809-818 (2018) - [j42]Muhammad Amith
, Zhe He
, Jiang Bian
, Juan Antonio Lossio-Ventura
, Cui Tao
:
Assessing the practice of biomedical ontology evaluation: Gaps and opportunities. J. Biomed. Informatics 80: 1-13 (2018) - [j41]Hee-Jin Lee, Yaoyun Zhang, Min Jiang, Jun Xu, Cui Tao
, Hua Xu:
Identifying direct temporal relations between time and events from clinical notes. BMC Medical Informatics Decis. Mak. 18(S-2): 23-34 (2018) - [j40]Zhe He
, Cui Tao
, Jiang Bian, Rui Zhang, Jingshan Huang:
Introduction: selected extended articles from the 2nd International Workshop on Semantics-Powered Data Analytics (SEPDA 2017). BMC Medical Informatics Decis. Mak. 18(S-2): 56:1-56:4 (2018) - [j39]Xinyuan Zhang, Shiqi Wang, Jie Liu, Cui Tao
:
Towards improving diagnosis of skin diseases by combining deep neural network and human knowledge. BMC Medical Informatics Decis. Mak. 18(S-2): 69-76 (2018) - [j38]Jingcheng Du, Yaoyun Zhang, Jianhong Luo
, Yuxi Jia, Qiang Wei, Cui Tao
, Hua Xu:
Extracting psychiatric stressors for suicide from social media using deep learning. BMC Medical Informatics Decis. Mak. 18(S-2): 77-87 (2018) - [j37]Rebecca Lin, Muhammad Amith, Chen Liang
, Rui Duan, Yong Chen, Cui Tao:
Visualized Emotion Ontology: a model for representing visual cues of emotions. BMC Medical Informatics Decis. Mak. 18(S-2): 101-113 (2018) - [c89]Jing An, Mandana Salimi, Anupama E. Gururaj, Cui Tao, Degui Zhi, Hua Xu:
Development of HeartData, a Data Discovery Index Prototype for Cardiovascular data. AMIA 2018 - [c88]Jingcheng Du, Fang Li, Yuxi Jia, Yang Xiang, Lu Tang, Sahiti Myneni, Cui Tao:
Mining Human Papillomavirus Vaccination Health Beliefs from Twitter Using Attentive Recurrent Neural Network. AMIA 2018 - [c87]Fang Li, Jingcheng Du, Guozheng Rao, Cui Tao:
Construction of Drug Repurposing-oriented Alzheimer's Disease Ontology. AMIA 2018 - [c86]Frank J. Manion, Marcelline R. Harris, Muhamamd F. Amith, Cui Tao:
Development and Validation of an Ontological Representation of the US Common Rule. AMIA 2018 - [c85]Jiayi Tong, Jing Huang, Jingcheng Du, Yi Cai, Cui Tao, Yong Chen:
Identification of Rare Adverse Events with Year-varying Reporting Rates for FLU4 Vaccine in VAERS. AMIA 2018 - [c84]Yang Xiang, Jun Xu, Jingcheng Du, Degui Zhi, Cui Tao:
Asthma Onset Prediction Using Structured EMR Data. AMIA 2018 - [c83]Xinyuan Zhang, Sicheng Zhou, Luca Giancardo, Cui Tao:
Computer Aided Diagnosis of Chest X-rays using by Combining Deep Convolutional Neural Networks. AMIA 2018 - [c82]Muhammad Amith
, Frank J. Manion, Chen Liang, Marcelline R. Harris, Dennis Wang, Yongqun He, Cui Tao:
OntoKeeper: Semiotic-driven Ontology Evaluation Tool For Biomedical Ontologists. BIBM 2018: 1614-1617 - [c81]Qing Cong
, Zhiyong Feng, Fang Li, Yang Xiang, Guozheng Rao
, Cui Tao:
X-A-BiLSTM: a Deep Learning Approach for Depression Detection in Imbalanced Data. BIBM 2018: 1624-1627 - [c80]Qing Cong
, Zhiyong Feng, Fang Li, Li Zhang, Guozheng Rao
, Cui Tao:
Constructing Biomedical Knowledge Graph Based on SemMedDB and Linked Open Data. BIBM 2018: 1628-1631 - [c79]Jing Huang, Xinyuan Zhang, Jiayi Tong, Jingcheng Du, Rui Duan, Liu Yang
, Jason H. Moore, Yong Chen, Cui Tao:
Comparing adverse effects of Hepatitis C drugs using FAERS data. BIBM 2018: 1653-1656 - [c78]Muhammad Amith
, Rebecca Lin
, Chen Liang
, Yang Gong, Cui Tao
:
VEO-Engine: Interfacing and Reasoning with an Emotion Ontology for Device Visual Expression. HCI (29) 2018: 349-355 - [c77]J. Neil Otte, Cooper Stansbury, Jonathan Vajda, Frank J. Manion, Elizabeth Umberfield, Yongqun He, Marcelline R. Harris, Jihad S. Obeid, Mathias Brochhausen, William D. Duncan, Cui Tao:
Coordinated Evolution of Ontologies of Informed Consent. ICBO 2018 - [c76]Jianhong Luo, Jingcheng Du, Cui Tao, Hua Xu, Yaoyun Zhang:
Exploring Temporal Patterns of Suicidal Behavior on Twitter. ICHI Workshops 2018: 55-56 - [c75]Xinyuan Zhang, Rui Duan, Jingcheng Du, Jing Huang, Yong Chen, Cui Tao:
Comparing Pharmacovigilance Outcomes Between FAERS and EMR Data for Acute Mania Patients. ICHI Workshops 2018: 57-59 - [c74]Fang Li, Guozheng Rao
, Jingcheng Du, Yang Xiang, Yaoyun Zhang, Salih Selek, Jane Elizabeth Hamilton, Hua Xu, Cui Tao:
Term Standardization and Normalization for Research Domain Criteria (RDoC). ICHI Workshops 2018: 60-61 - [i1]Jingcheng Du, Qingyu Chen, Yifan Peng, Yang Xiang, Cui Tao, Zhiyong Lu:
ML-Net: multi-label classification of biomedical texts with deep neural networks. CoRR abs/1811.05475 (2018) - 2017
- [j36]Jingcheng Du, Jun Xu, Hsing-yi Song, Xiangyu Liu, Cui Tao
:
Optimization on machine learning based approaches for sentiment analysis on HPV vaccines related tweets. J. Biomed. Semant. 8(1): 9:1-9:7 (2017) - [j35]Muhammad Amith
, Cui Tao
:
Modulated evaluation metrics for drug-based ontologies. J. Biomed. Semant. 8(1): 17:1-17:8 (2017) - [j34]Deepak K. Sharma, Harold R. Solbrig, Cui Tao
, Chunhua Weng, Christopher G. Chute, Guoqian Jiang
:
Building a semantic web-based metadata repository for facilitating detailed clinical modeling in cancer genome studies. J. Biomed. Semant. 8(1): 19:1-19:11 (2017) - [j33]