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ORCIDGenomics, Proteomics & Bioinformatics, Volume 12
Volume 12, Number 1, February 2014
- Yan Zeng:
Relative Specificity: All Substrates Are Not Created Equal. 1-7
- Hélène Léger
, Caroline Smet-Nocca, Amel Attmane-Elakeb, Sara Morley-Fletcher, Arndt Benecke, Sebastian Eilebrecht:
A TDG/CBP/RARα Ternary Complex Mediates the Retinoic Acid-dependent Expression of DNA Methylation-sensitive Genes. 8-18 - Wang-Xia Wang, Robert J. Danaher, Craig S. Miller, Joseph R. Berger, Vega G. Nubia, Bernard S. Wilfred, Janna H. Neltner, Christopher M. Norris, Peter T. Nelson:
Expression of miR-15/107 Family MicroRNAs in Human Tissues and Cultured Rat Brain Cells. 19-30 - Xiaolei Zhao, Shouqiang Zhong, Xiaoyu Zuo, Meihua Lin, Jiheng Qin, Yizhao Luan, Naizun Zhang, Yan Liang, Shaoqi Rao:
Pathway-based Analysis of the Hidden Genetic Heterogeneities in Cancers. 31-38 - Yichen Cheng, Xin Gao, Faming Liang:
Bayesian Peak Picking for NMR Spectra. 39-47
- Ruiqi Liao, Yifan Zhang, Jihong Guan, Shuigeng Zhou:
CloudNMF: A MapReduce Implementation of Nonnegative Matrix Factorization for Large-scale Biological Datasets. 48-51 - Qian Zhou, Xiaoquan Su, Gongchao Jing, Kang Ning:
Meta-QC-Chain: Comprehensive and Fast Quality Control Method for Metagenomic Data. 52-56
Volume 12, Number 2, April 2014
- Jiayan Wu, Jing-Fa Xiao, Zhang Zhang, Xumin Wang, Songnian Hu, Jun Yu:
Ribogenomics: the Science and Knowledge of RNA. 57-63
- Yong-Xin Liu, Meng Wang, Xiu-Jie Wang:
Endogenous Small RNA Clusters in Plants. 64-71 - Xiaoyu Li, Jinghui Song, Chengqi Yi:
Genome-wide Mapping of Cellular Protein-RNA Interactions Enabled by Chemical Crosslinking. 72-78
- Qian Xiong, Yadong Yang, Hai Wang, Jie Li, Shaobin Wang, Yanming Li, Yaran Yang, Kan Cai, Xiuyan Ruan, Jiangwei Yan, Songnian Hu, Xiangdong Fang:
Characterization of miRNomes in Acute and Chronic Myeloid Leukemia Cell Lines. 79-91 - Varadharajan Vaishnavi, Mayakannan Manikandan, Arasambattu Kannan Munirajan:
Mining the 3′UTR of Autism-implicated Genes for SNPs Perturbing MicroRNA Regulation. 92-104
- Collin Tokheim, Juw Won Park, Yi Xing:
PrimerSeq: Design and Visualization of RT-PCR Primers for Alternative Splicing Using RNA-seq Data. 105-109
Volume 12, Number 3, June 2014
- Wei Xu, Chengqi Xin, Qiang Lin, Feng Ding, Wei Gong, Yuanyuan Zhou, Jun Yu, Peng Cui, Songnian Hu:
Adolescent Mouse Takes on An Active Transcriptomic Expression During Postnatal Cerebral Development. 111-119 - Xundou Li, Mindi Zhao, Menglin Li, Lulu Jia, Youhe Gao:
Effects of Three Commonly-used Diuretics on the Urinary Proteome. 120-126
- Md. Aftabuddin, Chittabrata Mal, Arindam Deb, Sudip Kundu:
C2Analyzer: Co-target-Co-function Analyzer. 133-136 - Xinwei Cheng, Xiaohua Chen, Xiaoquan Su, Huanxin Zhao, Maozhen Han, Cunpei Bo, Jian Xu, Hong Bai, Kang Ning:
DNA Extraction Protocol for Biological Ingredient Analysis of Liuwei Dihuang Wan. 137-143
- Zhancheng Gao, Yu Kang, Jun Yu, Lufeng Ren:
Human Pharyngeal Microbiome May Play A Protective Role in Respiratory Tract Infections. 144-150
Volume 12, Number 4, August 2014
- Zhang Zhang, Weimin Zhu, Jingchu Luo:
Bringing Biocuration to China. 153-155
- Guangchun Han, Jiya Sun, Jiajia Wang, Zhouxian Bai, Fuhai Song, Hongxing Lei:
Genomics in Neurological Disorders. 156-163 - Shweta Mehrotra, Vinod Goyal:
Repetitive Sequences in Plant Nuclear DNA: Types, Distribution, Evolution and Function. 164-171
- He Huang, Yan Dong, Zhi-Liang Yang, Hao Luo, Xi Zhang, Feng Gao:
Complete Sequence of pABTJ2, A Plasmid from Acinetobacter baumannii MDR-TJ, Carrying Many Phage-like Elements. 172-177
- Massimo Natale, Alfredo Benso, Stefano Di Carlo, Elisa Ficarra:
FunMod: A Cytoscape Plugin for Identifying Functional Modules in Undirected Protein-Protein Networks. 178-186
Volume 12, Number 5, October 2014
Perspective
- Yixue Li, Luonan Chen:
Big Biological Data: Challenges and Opportunities. 187-189
- Yaran Yang, Bingbing Xie, Jiangwei Yan:
Application of Next-generation Sequencing Technology in Forensic Science. 190-197 - Maimon C. Rose, Elina Kostyanovskaya, Rong Stephanie Huang:
Pharmacogenomics of Cisplatin Sensitivity in Non-small Cell Lung Cancer. 198-209 - Lv Jin, Xiaoyu Zuo, Wei-Yang Su, Xiao-Lei Zhao, Man-Qiong Yuan, Li-Zhen Han, Xiang Zhao, Yeda Chen, Shao-Qi Rao:
Pathway-based Analysis Tools for Complex Diseases: A Review. 210-220
- Meiyan Chen, Jing Wu, Ning Liang, Lihui Tang, Yanhua Chen, Huishuang Chen, Wei Wei, Tianying Wei, Hui Huang, Xin Yi, Ming Qi:
Identification of A Novel SBF2 Frameshift Mutation in Charcot-Marie-Tooth Disease Type 4B2 Using Whole-exome Sequencing. 221-227 - Müserref Duygu Saçar, Caner Bagci, Jens Allmer:
Computational Prediction of MicroRNAs from Toxoplasma gondii Potentially Regulating the Hosts' Gene Expression. 228-238 - Linlin Pan, Wei Gong, Yuanyuan Zhou, Xiaonuan Li, Jun Yu, Songnian Hu:
A Comprehensive Transcriptomic Analysis of Infant and Adult Mouse Ovary. 239-248
- Bader A. Alharbi, Thamir H. Alshammari, Nathan L. Felton, Victor B. Zhurkin, Feng Cui:
nuMap: A Web Platform for Accurate Prediction of Nucleosome Positioning. 249-253
Volume 12, Number 6, December 2014
- Christopher Bruhn, Torsten Kroll, Zhao-Qi Wang:
Systematic Characterization of Cell Cycle Phase-dependent Protein Dynamics and Pathway Activities by High-content Microscopy-assisted Cell Cycle Phenotyping. 255-265
- Dake Zhang, Nan Du, Sufang Ma, Qingtao Hu, Guangwen Lu, Wei Chen, Changqing Zeng:
In vitro Transcriptome Analysis of Two Chinese Isolates of Streptococcus suis Serotype 2. 266-275 - Shizhu Zang, Ruifang Guo, Rui Xing, Liang Zhang, Wenmei Li, Min Zhao, Jingyuan Fang, Fulian Hu, Bin Kang, Yonghong Ren, Yonglong Zhuang, Siqi Liu, Rong Wang, Xianghong Li, Yingyan Yu, Jing Cheng, Youyong Lu:
Identification of Differentially-expressed Genes in Intestinal Gastric Cancer by Microarray Analysis. 276-283 - Cheng-Wei Wu, Kyle K. Biggar, Kenneth B. Storey:
Expression Profiling and Structural Characterization of MicroRNAs in Adipose Tissues of Hibernating Ground Squirrels. 284-291
- Meiyan Zhu, Tongyang Liu, Jihong Zhang, Shuting Jia, Wenru Tang, Ying Luo:
Association Between rs1344706 of ZNF804A and Schizophrenia: A Meta-analysis. 292-296
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