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Publication search results
found 727 matches
- 2020
- Ko Abe, Kodai Minoura, Yuka Maeda, Hiroyoshi Nishikawa, Teppei Shimamura:
Model-based clustering for flow and mass cytometry data with clinical information. BMC Bioinform. 21-S(13): 393 (2020) - Sudipta Acharya, Laizhong Cui, Yi Pan:
A consensus multi-view multi-objective gene selection approach for improved sample classification. BMC Bioinform. 21-S(13): 386 (2020) - Nauman Ahmed, Tong Dong Qiu, Koen Bertels, Zaid Al-Ars:
GPU acceleration of Darwin read overlapper for de novo assembly of long DNA reads. BMC Bioinform. 21-S(13): 388 (2020) - Benjamin Albrecht, Caner Bagci, Daniel H. Huson:
MAIRA- real-time taxonomic and functional analysis of long reads on a laptop. BMC Bioinform. 21-S(13): 390 (2020) - Xiaoyang Chen, Shengquan Chen, Rui Jiang:
EnClaSC: a novel ensemble approach for accurate and robust cell-type classification of single-cell transcriptomes. BMC Bioinform. 21-S(13): 392 (2020) - Sangwoo Lee, Eun Kyung Choe, So Yeon Kim, Hua Sun Kim, Kyu Joo Park, Dokyoon Kim:
Liver imaging features by convolutional neural network to predict the metachronous liver metastasis in stage I-III colorectal cancer patients based on preoperative abdominal CT scan. BMC Bioinform. 21-S(13): 382 (2020) - Ke Li, Sijia Zhang, Di Yan, Yannan Bin, Junfeng Xia:
Prediction of hot spots in protein-DNA binding interfaces based on supervised isometric feature mapping and extreme gradient boosting. BMC Bioinform. 21-S(13): 381 (2020) - Yang-Chi-Dung Lin, Hsi-Yuan Huang, Sirjana Shrestha, Chih-Hung Chou, Yen-Hua Chen, Chi-Ru Chen, Hsiao-Chin Hong, Jing Li, Yi-An Chang, Men-Yee Chiew, Ya-Rong Huang, Siang-Jyun Tu, Ting-Hsuan Sun, Shun-Long Weng, Ching-Ping Tseng, Hsien-Da Huang:
Multi-omics profiling reveals microRNA-mediated insulin signaling networks. BMC Bioinform. 21-S(13): 389 (2020) - Jinling Liu, Xiaojun Ma, Gregory F. Cooper, Xinghua Lu:
Explicit representation of protein activity states significantly improves causal discovery of protein phosphorylation networks. BMC Bioinform. 21-S(13): 379 (2020) - Yongchun Lü, Xiangrui Zeng, Xinhui Tian, Xiao Shi, Hui Wang, Xiaohui Zheng, Xiaodong Liu, Xiaofang Zhao, Xin Gao, Min Xu:
Spark-based parallel calculation of 3D fourier shell correlation for macromolecule structure local resolution estimation. BMC Bioinform. 21-S(13): 391 (2020) - Yuliang Pan, Shuigeng Zhou, Jihong Guan:
Computationally identifying hot spots in protein-DNA binding interfaces using an ensemble approach. BMC Bioinform. 21-S(13): 384 (2020) - Jiajie Peng, Jingyi Li, Xuequn Shang:
A learning-based method for drug-target interaction prediction based on feature representation learning and deep neural network. BMC Bioinform. 21-S(13): 394 (2020) - Jian Wang, Mengying Li, Qishuai Diao, Hongfei Lin, Zhihao Yang, Yi-Jia Zhang:
Biomedical document triage using a hierarchical attention-based capsule network. BMC Bioinform. 21-S(13): 380 (2020) - Yujie You, Xufang Ru, Wanjing Lei, Tingting Li, Ming Xiao, Huiru Zheng, Yujie Chen, Le Zhang:
Developing the novel bioinformatics algorithms to systematically investigate the connections among survival time, key genes and proteins for Glioblastoma multiforme. BMC Bioinform. 21-S(13): 383 (2020) - Yuanke Zhong, Jing Li, Junhao He, Yiqun Gao, Jie Liu, Jingru Wang, Xuequn Shang, Jialu Hu:
Twadn: an efficient alignment algorithm based on time warping for pairwise dynamic networks. BMC Bioinform. 21-S(13): 385 (2020) - Renyi Zhou, Zhangli Lu, Huimin Luo, Ju Xiang, Min Zeng, Min Li:
NEDD: a network embedding based method for predicting drug-disease associations. BMC Bioinform. 21-S(13): 387 (2020) - Tanveer Ahmad, Nauman Ahmed, Zaid Al-Ars, H. Peter Hofstee:
Optimizing performance of GATK workflows using Apache Arrow In-Memory data framework. BMC Genom. 21(S-10) (2020) - Samuel Briand, Christophe Dessimoz, Nadia El-Mabrouk, Manuel Lafond, Gabriela Lobinska:
A generalized Robinson-Foulds distance for labeled trees. BMC Genom. 21(S-10) (2020) - Ju Hun Choi, Taegun Kim, Junghyun Jung, Jong Wha J. Joo:
Fully automated web-based tool for identifying regulatory hotspots. BMC Genom. 21(S-10) (2020) - Xikang Feng, Lingxi Chen, Zishuai Wang, Shuai Cheng Li:
I-Impute: a self-consistent method to impute single cell RNA sequencing data. BMC Genom. 21(S-10) (2020) - Ah-Jung Jeon, Greg Tucker-Kellogg:
Bivalent genes that undergo transcriptional switching identify networks of key regulators of embryonic stem cell differentiation. BMC Genom. 21(S-10) (2020) - Huiran Li, Yin Guo, Menglan Cai, Limin Li:
MicroRNA-disease association prediction by matrix tri-factorization. BMC Genom. 21(S-10) (2020) - Jiaqi Liu, Jiayin Wang, Xiao Xiao, Xin Lai, Daocheng Dai, Xuanping Zhang, Xiaoyan Zhu, Zhongmeng Zhao, Juan Wang, Zhimin Li:
A hybrid correcting method considering heterozygous variations by a comprehensive probabilistic model. BMC Genom. 21(S-10) (2020) - Yijie Wang, Hyundoo Jeong, Byung-Jun Yoon, Xiaoning Qian:
ClusterM: a scalable algorithm for computational prediction of conserved protein complexes across multiple protein interaction networks. BMC Genom. 21(S-10) (2020) - Xueting Wu, Xuetong Li, Wei Wang, Yuanhong Shan, Cuiting Wang, Mulan Zhu, Qiong La, Yang Zhong, Ye Xu, Peng Nan, Xuan Li:
Integrated metabolomics and transcriptomics study of traditional herb Astragalus membranaceus Bge. var. mongolicus (Bge.) Hsiao reveals global metabolic profile and novel phytochemical ingredients. BMC Genom. 21(S-10) (2020) - 2019
- Quan Chen, Jun Zhu:
Detecting virus-specific effects on post-infection temporal gene expression. BMC Bioinform. 20-S(3): 109-118 (2019) - Safa Jammali, Jean-David Aguilar, Esaie Kuitche, Aïda Ouangraoua:
SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups. BMC Bioinform. 20-S(3): 37-52 (2019) - Risa Kawaguchi, Hisanori Kiryu, Junichi Iwakiri, Jun Sese:
reactIDR: evaluation of the statistical reproducibility of high-throughput structural analyses towards a robust RNA structure prediction. BMC Bioinform. 20-S(3): 15-24 (2019) - Audrey Legendre, Eric Angel, Fariza Tahi:
RCPred: RNA complex prediction as a constrained maximum weight clique problem. BMC Bioinform. 20-S(3): 53-62 (2019) - Xiujuan Lei, Ming Fang, Ling Guo, Fang-Xiang Wu:
Protein complex detection based on flower pollination mechanism in multi-relation reconstructed dynamic protein networks. BMC Bioinform. 20-S(3): 63-74 (2019)
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