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@article{DBLP:journals/bmcbi/AbeMMNS20, author = {Ko Abe and Kodai Minoura and Yuka Maeda and Hiroyoshi Nishikawa and Teppei Shimamura}, title = {Model-based clustering for flow and mass cytometry data with clinical information}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {393}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03671-7}, doi = {10.1186/S12859-020-03671-7}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/AbeMMNS20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AcharyaCP20, author = {Sudipta Acharya and Laizhong Cui and Yi Pan}, title = {A consensus multi-view multi-objective gene selection approach for improved sample classification}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {386}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03681-5}, doi = {10.1186/S12859-020-03681-5}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/AcharyaCP20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AhmedQBA20, author = {Nauman Ahmed and Tong Dong Qiu and Koen Bertels and Zaid Al{-}Ars}, title = {{GPU} acceleration of Darwin read overlapper for de novo assembly of long {DNA} reads}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {388}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03685-1}, doi = {10.1186/S12859-020-03685-1}, timestamp = {Fri, 25 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/AhmedQBA20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AlbrechtBH20, author = {Benjamin Albrecht and Caner Bagci and Daniel H. Huson}, title = {{MAIRA-} real-time taxonomic and functional analysis of long reads on a laptop}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {390}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03684-2}, doi = {10.1186/S12859-020-03684-2}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/AlbrechtBH20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenCJ20, author = {Xiaoyang Chen and Shengquan Chen and Rui Jiang}, title = {EnClaSC: a novel ensemble approach for accurate and robust cell-type classification of single-cell transcriptomes}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {392}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03679-z}, doi = {10.1186/S12859-020-03679-Z}, timestamp = {Thu, 29 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenCJ20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LeeCKKPK20, author = {Sangwoo Lee and Eun Kyung Choe and So Yeon Kim and Hua Sun Kim and Kyu Joo Park and Dokyoon Kim}, title = {Liver imaging features by convolutional neural network to predict the metachronous liver metastasis in stage {I-III} colorectal cancer patients based on preoperative abdominal {CT} scan}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {382}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03686-0}, doi = {10.1186/S12859-020-03686-0}, timestamp = {Fri, 25 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LeeCKKPK20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiZYBX20, author = {Ke Li and Sijia Zhang and Di Yan and Yannan Bin and Junfeng Xia}, title = {Prediction of hot spots in protein-DNA binding interfaces based on supervised isometric feature mapping and extreme gradient boosting}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {381}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03683-3}, doi = {10.1186/S12859-020-03683-3}, timestamp = {Fri, 25 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LiZYBX20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LinHSCCCHLCCHTS20, author = {Yang{-}Chi{-}Dung Lin and Hsi{-}Yuan Huang and Sirjana Shrestha and Chih{-}Hung Chou and Yen{-}Hua Chen and Chi{-}Ru Chen and Hsiao{-}Chin Hong and Jing Li and Yi{-}An Chang and Men{-}Yee Chiew and Ya{-}Rong Huang and Siang{-}Jyun Tu and Ting{-}Hsuan Sun and Shun{-}Long Weng and Ching{-}Ping Tseng and Hsien{-}Da Huang}, title = {Multi-omics profiling reveals microRNA-mediated insulin signaling networks}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {389}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03678-0}, doi = {10.1186/S12859-020-03678-0}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/LinHSCCCHLCCHTS20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiuMCL20, author = {Jinling Liu and Xiaojun Ma and Gregory F. Cooper and Xinghua Lu}, title = {Explicit representation of protein activity states significantly improves causal discovery of protein phosphorylation networks}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {379}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03676-2}, doi = {10.1186/S12859-020-03676-2}, timestamp = {Fri, 25 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LiuMCL20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LuZTSWZLZGX20, author = {Yongchun L{\"{u}} and Xiangrui Zeng and Xinhui Tian and Xiao Shi and Hui Wang and Xiaohui Zheng and Xiaodong Liu and Xiaofang Zhao and Xin Gao and Min Xu}, title = {Spark-based parallel calculation of 3D fourier shell correlation for macromolecule structure local resolution estimation}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {391}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03680-6}, doi = {10.1186/S12859-020-03680-6}, timestamp = {Fri, 25 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LuZTSWZLZGX20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PanZG20, author = {Yuliang Pan and Shuigeng Zhou and Jihong Guan}, title = {Computationally identifying hot spots in protein-DNA binding interfaces using an ensemble approach}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {384}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03675-3}, doi = {10.1186/S12859-020-03675-3}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/PanZG20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PengLS20, author = {Jiajie Peng and Jingyi Li and Xuequn Shang}, title = {A learning-based method for drug-target interaction prediction based on feature representation learning and deep neural network}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {394}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03677-1}, doi = {10.1186/S12859-020-03677-1}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/PengLS20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WangLDLYZ20, author = {Jian Wang and Mengying Li and Qishuai Diao and Hongfei Lin and Zhihao Yang and Yi{-}Jia Zhang}, title = {Biomedical document triage using a hierarchical attention-based capsule network}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {380}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03673-5}, doi = {10.1186/S12859-020-03673-5}, timestamp = {Fri, 25 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WangLDLYZ20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YouRLLXZCZ20, author = {Yujie You and Xufang Ru and Wanjing Lei and Tingting Li and Ming Xiao and Huiru Zheng and Yujie Chen and Le Zhang}, title = {Developing the novel bioinformatics algorithms to systematically investigate the connections among survival time, key genes and proteins for Glioblastoma multiforme}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {383}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03674-4}, doi = {10.1186/S12859-020-03674-4}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/YouRLLXZCZ20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhongLHGLWSH20, author = {Yuanke Zhong and Jing Li and Junhao He and Yiqun Gao and Jie Liu and Jingru Wang and Xuequn Shang and Jialu Hu}, title = {Twadn: an efficient alignment algorithm based on time warping for pairwise dynamic networks}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {385}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03672-6}, doi = {10.1186/S12859-020-03672-6}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhongLHGLWSH20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhouLLXZL20, author = {Renyi Zhou and Zhangli Lu and Huimin Luo and Ju Xiang and Min Zeng and Min Li}, title = {{NEDD:} a network embedding based method for predicting drug-disease associations}, journal = {{BMC} Bioinform.}, volume = {21-S}, number = {13}, pages = {387}, year = {2020}, url = {https://doi.org/10.1186/s12859-020-03682-4}, doi = {10.1186/S12859-020-03682-4}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhouLLXZL20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/AhmadAAH20, author = {Tanveer Ahmad and Nauman Ahmed and Zaid Al{-}Ars and H. Peter Hofstee}, title = {Optimizing performance of {GATK} workflows using Apache Arrow In-Memory data framework}, journal = {{BMC} Genom.}, volume = {21}, number = {{S-10}}, year = {2020}, url = {https://doi.org/10.1186/s12864-020-07013-y}, doi = {10.1186/S12864-020-07013-Y}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/AhmadAAH20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/BriandDELL20, author = {Samuel Briand and Christophe Dessimoz and Nadia El{-}Mabrouk and Manuel Lafond and Gabriela Lobinska}, title = {A generalized Robinson-Foulds distance for labeled trees}, journal = {{BMC} Genom.}, volume = {21}, number = {{S-10}}, year = {2020}, url = {https://doi.org/10.1186/s12864-020-07011-0}, doi = {10.1186/S12864-020-07011-0}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/BriandDELL20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChoiKJJ20, author = {Ju Hun Choi and Taegun Kim and Junghyun Jung and Jong Wha J. Joo}, title = {Fully automated web-based tool for identifying regulatory hotspots}, journal = {{BMC} Genom.}, volume = {21}, number = {{S-10}}, year = {2020}, url = {https://doi.org/10.1186/s12864-020-07012-z}, doi = {10.1186/S12864-020-07012-Z}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChoiKJJ20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/FengCWL20, author = {Xikang Feng and Lingxi Chen and Zishuai Wang and Shuai Cheng Li}, title = {I-Impute: a self-consistent method to impute single cell {RNA} sequencing data}, journal = {{BMC} Genom.}, volume = {21}, number = {{S-10}}, year = {2020}, url = {https://doi.org/10.1186/s12864-020-07007-w}, doi = {10.1186/S12864-020-07007-W}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/FengCWL20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/JeonT20, author = {Ah{-}Jung Jeon and Greg Tucker{-}Kellogg}, title = {Bivalent genes that undergo transcriptional switching identify networks of key regulators of embryonic stem cell differentiation}, journal = {{BMC} Genom.}, volume = {21}, number = {{S-10}}, year = {2020}, url = {https://doi.org/10.1186/s12864-020-07009-8}, doi = {10.1186/S12864-020-07009-8}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/JeonT20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiGCL20, author = {Huiran Li and Yin Guo and Menglan Cai and Limin Li}, title = {MicroRNA-disease association prediction by matrix tri-factorization}, journal = {{BMC} Genom.}, volume = {21}, number = {{S-10}}, year = {2020}, url = {https://doi.org/10.1186/s12864-020-07006-x}, doi = {10.1186/S12864-020-07006-X}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiGCL20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiuWXLDZZZWL20, author = {Jiaqi Liu and Jiayin Wang and Xiao Xiao and Xin Lai and Daocheng Dai and Xuanping Zhang and Xiaoyan Zhu and Zhongmeng Zhao and Juan Wang and Zhimin Li}, title = {A hybrid correcting method considering heterozygous variations by a comprehensive probabilistic model}, journal = {{BMC} Genom.}, volume = {21}, number = {{S-10}}, year = {2020}, url = {https://doi.org/10.1186/s12864-020-07008-9}, doi = {10.1186/S12864-020-07008-9}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuWXLDZZZWL20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/WangJYQ20, author = {Yijie Wang and Hyundoo Jeong and Byung{-}Jun Yoon and Xiaoning Qian}, title = {ClusterM: a scalable algorithm for computational prediction of conserved protein complexes across multiple protein interaction networks}, journal = {{BMC} Genom.}, volume = {21}, number = {{S-10}}, year = {2020}, url = {https://doi.org/10.1186/s12864-020-07010-1}, doi = {10.1186/S12864-020-07010-1}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/WangJYQ20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/WuLWSWZLZXNL20, author = {Xueting Wu and Xuetong Li and Wei Wang and Yuanhong Shan and Cuiting Wang and Mulan Zhu and Qiong La and Yang Zhong and Ye Xu and Peng Nan and Xuan Li}, title = {Integrated metabolomics and transcriptomics study of traditional herb Astragalus membranaceus Bge. var. mongolicus (Bge.) Hsiao reveals global metabolic profile and novel phytochemical ingredients}, journal = {{BMC} Genom.}, volume = {21}, number = {{S-10}}, year = {2020}, url = {https://doi.org/10.1186/s12864-020-07005-y}, doi = {10.1186/S12864-020-07005-Y}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/WuLWSWZLZXNL20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenZ19, author = {Quan Chen and Jun Zhu}, title = {Detecting virus-specific effects on post-infection temporal gene expression}, journal = {{BMC} Bioinform.}, volume = {20-S}, number = {3}, pages = {109--118}, year = {2019}, url = {https://doi.org/10.1186/s12859-019-2653-4}, doi = {10.1186/S12859-019-2653-4}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenZ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JammaliAKO19, author = {Safa Jammali and Jean{-}David Aguilar and Esaie Kuitche and A{\"{\i}}da Ouangraoua}, title = {SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups}, journal = {{BMC} Bioinform.}, volume = {20-S}, number = {3}, pages = {37--52}, year = {2019}, url = {https://doi.org/10.1186/s12859-019-2647-2}, doi = {10.1186/S12859-019-2647-2}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JammaliAKO19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KawaguchiKIS19, author = {Risa Kawaguchi and Hisanori Kiryu and Junichi Iwakiri and Jun Sese}, title = {reactIDR: evaluation of the statistical reproducibility of high-throughput structural analyses towards a robust {RNA} structure prediction}, journal = {{BMC} Bioinform.}, volume = {20-S}, number = {3}, pages = {15--24}, year = {2019}, url = {https://doi.org/10.1186/s12859-019-2645-4}, doi = {10.1186/S12859-019-2645-4}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KawaguchiKIS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LegendreAT19, author = {Audrey Legendre and Eric Angel and Fariza Tahi}, title = {RCPred: {RNA} complex prediction as a constrained maximum weight clique problem}, journal = {{BMC} Bioinform.}, volume = {20-S}, number = {3}, pages = {53--62}, year = {2019}, url = {https://doi.org/10.1186/s12859-019-2648-1}, doi = {10.1186/S12859-019-2648-1}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LegendreAT19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LeiFGW19, author = {Xiujuan Lei and Ming Fang and Ling Guo and Fang{-}Xiang Wu}, title = {Protein complex detection based on flower pollination mechanism in multi-relation reconstructed dynamic protein networks}, journal = {{BMC} Bioinform.}, volume = {20-S}, number = {3}, pages = {63--74}, year = {2019}, url = {https://doi.org/10.1186/s12859-019-2649-0}, doi = {10.1186/S12859-019-2649-0}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/LeiFGW19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiZSLZLWJFL019, author = {Ran Li and Xiangrui Zeng and Stephanie E. Sigmund and Ruogu Lin and Bo Zhou and Chang Liu and Kaiwen Wang and Rui Jiang and Zachary Freyberg and Hairong Lv and Min Xu}, title = {Automatic localization and identification of mitochondria in cellular electron cryo-tomography using faster-RCNN}, journal = {{BMC} Bioinform.}, volume = {20-S}, number = {3}, pages = {75--85}, year = {2019}, url = {https://doi.org/10.1186/s12859-019-2650-7}, doi = {10.1186/S12859-019-2650-7}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/LiZSLZLWJFL019.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/RyuKYLJ19, author = {Jayoung Ryu and Hyun{-}Woong Kim and Dongchan Yang and Andrew J. Lee and Inkyung Jung}, title = {A new class of constitutively active super-enhancers is associated with fast recovery of 3D chromatin loops}, journal = {{BMC} Bioinform.}, volume = {20-S}, number = {3}, pages = {25--36}, year = {2019}, url = {https://doi.org/10.1186/s12859-019-2646-3}, doi = {10.1186/S12859-019-2646-3}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/RyuKYLJ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ShanWH19, author = {Nayang Shan and Zuoheng Wang and Lin Hou}, title = {Identification of trans-eQTLs using mediation analysis with multiple mediators}, journal = {{BMC} Bioinform.}, volume = {20-S}, number = {3}, pages = {87--97}, year = {2019}, url = {https://doi.org/10.1186/s12859-019-2651-6}, doi = {10.1186/S12859-019-2651-6}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ShanWH19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WangWZKSZB19, author = {Chao Wang and Yi Wei and Haicang Zhang and Lupeng Kong and Shiwei Sun and Wei{-}Mou Zheng and Dongbo Bu}, title = {Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling}, journal = {{BMC} Bioinform.}, volume = {20-S}, number = {3}, pages = {99--108}, year = {2019}, url = {https://doi.org/10.1186/s12859-019-2652-5}, doi = {10.1186/S12859-019-2652-5}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WangWZKSZB19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/AbeHOS19, author = {Ko Abe and Masaaki Hirayama and Kinji Ohno and Teppei Shimamura}, title = {{ENIGMA:} an enterotype-like unigram mixture model for microbial association analysis}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5476-9}, doi = {10.1186/S12864-019-5476-9}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/AbeHOS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/AiLPCCX19, author = {Dongmei Ai and Xiaoxin Li and Hongfei Pan and Jiamin Chen and Jacob A. Cram and Li C. Xia}, title = {Explore mediated co-varying dynamics in microbial community using integrated local similarity and liquid association analysis}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5469-8}, doi = {10.1186/S12864-019-5469-8}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/AiLPCCX19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/AnMW19, author = {Shaokun An and Liang Ma and Lin Wan}, title = {{TSEE:} an elastic embedding method to visualize the dynamic gene expression patterns of time series single-cell {RNA} sequencing data}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5477-8}, doi = {10.1186/S12864-019-5477-8}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/AnMW19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/BiswasL19, author = {Bipasa Biswas and Yinglei Lai}, title = {A distance-type measure approach to the analysis of copy number variation in {DNA} sequencing data}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5491-x}, doi = {10.1186/S12864-019-5491-X}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/BiswasL19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/DuCS19, author = {Nan Du and Jiao Chen and Yanni Sun}, title = {Improving the sensitivity of long read overlap detection using grouped short k-mer matches}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5475-x}, doi = {10.1186/S12864-019-5475-X}, timestamp = {Wed, 16 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/DuCS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/Guzman-SaenzHBP19, author = {Aldo Guzm{\'{a}}n{-}S{\'{a}}enz and Niina Haiminen and Saugata Basu and Laxmi Parida}, title = {Signal enrichment with strain-level resolution in metagenomes using topological data analysis}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5490-y}, doi = {10.1186/S12864-019-5490-Y}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/Guzman-SaenzHBP19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/HuaZ19, author = {Kui Hua and Xuegong Zhang}, title = {Estimating the total genome length of a metagenomic sample using k-mers}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5467-x}, doi = {10.1186/S12864-019-5467-X}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/HuaZ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ParkKSHHLCK19, author = {Sungjoon Park and Minsu Kim and Seokjun Seo and Seungwan Hong and Kyoohyung Han and Keewoo Lee and Jung Hee Cheon and Sun Kim}, title = {A secure {SNP} panel scheme using homomorphically encrypted K-mers without {SNP} calling on the user side}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5473-z}, doi = {10.1186/S12864-019-5473-Z}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ParkKSHHLCK19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/QianMYLLH19, author = {Wenhao Qian and Ting Ma and Mao Ye and Zhiyao Li and Yuanhua Liu and Pei Hao}, title = {Microbiota in the apical root canal system of tooth with apical periodontitis}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5474-y}, doi = {10.1186/S12864-019-5474-Y}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/QianMYLLH19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/RenABA19, author = {Shanshan Ren and Nauman Ahmed and Koen Bertels and Zaid Al{-}Ars}, title = {{GPU} accelerated sequence alignment with traceback for {GATK} HaplotypeCaller}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5468-9}, doi = {10.1186/S12864-019-5468-9}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/RenABA19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/TianZTFYF19, author = {Qi Tian and Jianxiao Zou and Jianxiong Tang and Yuan Fang and Zhongli Yu and Shicai Fan}, title = {{MRCNN:} a deep learning model for regression of genome-wide {DNA} methylation}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5488-5}, doi = {10.1186/S12864-019-5488-5}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/TianZTFYF19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/YangYCN19, author = {Pengshuo Yang and Shaojun Yu and Lin Cheng and Kang Ning}, title = {Meta-network: optimized species-species network analysis for microbial communities}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5471-1}, doi = {10.1186/S12864-019-5471-1}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/YangYCN19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/YinWLLJ19, author = {Qijin Yin and Mengmeng Wu and Qiao Liu and Hairong Lv and Rui Jiang}, title = {DeepHistone: a deep learning approach to predicting histone modifications}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5489-4}, doi = {10.1186/S12864-019-5489-4}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/YinWLLJ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ZhangGZGZ19, author = {Xia Zhang and Yanglan Gan and Guobing Zou and Jihong Guan and Shuigeng Zhou}, title = {Genome-wide analysis of epigenetic dynamics across human developmental stages and tissues}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5472-0}, doi = {10.1186/S12864-019-5472-0}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhangGZGZ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ZhangLLNL19, author = {Yanlin Zhang and Weiwei Liu and Yu Lin and Yen Kaow Ng and Shuaicheng Li}, title = {Large-scale 3D chromatin reconstruction from chromosomal contacts}, journal = {{BMC} Genom.}, volume = {20}, number = {{S2}}, year = {2019}, url = {https://doi.org/10.1186/s12864-019-5470-2}, doi = {10.1186/S12864-019-5470-2}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhangLLNL19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/DuttaMASZ19, author = {Pritha Dutta and Lichun Ma and Yusuf Ali and Peter M. A. Sloot and Jie Zheng}, title = {Boolean network modeling of {\(\beta\)}-cell apoptosis and insulin resistance in type 2 diabetes mellitus}, journal = {{BMC} Syst. Biol.}, volume = {13-S}, number = {2}, pages = {36:1--36:12}, year = {2019}, url = {https://doi.org/10.1186/s12918-019-0692-0}, doi = {10.1186/S12918-019-0692-0}, timestamp = {Thu, 02 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/DuttaMASZ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/HaoDKBHTKFWSHK19, author = {Yangyang Hao and Quan{-}Yang Duh and Richard T. Kloos and Joshua Babiarz and R. Mack Harrell and S. Thomas Traweek and Su Yeon Kim and Grazyna Fedorowicz and P. Sean Walsh and Peter M. Sadow and Jing Huang and Giulia C. Kennedy}, title = {Identification of H{\"{u}}rthle cell cancers: solving a clinical challenge with genomic sequencing and a trio of machine learning algorithms}, journal = {{BMC} Syst. Biol.}, volume = {13-S}, number = {2}, pages = {27:1--27:14}, year = {2019}, url = {https://doi.org/10.1186/s12918-019-0693-z}, doi = {10.1186/S12918-019-0693-Z}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/HaoDKBHTKFWSHK19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/KCLCYH19, author = {Kishan KC and Rui Li and Feng Cui and Qi Yu and Anne R. Haake}, title = {{GNE:} a deep learning framework for gene network inference by aggregating biological information}, journal = {{BMC} Syst. Biol.}, volume = {13-S}, number = {2}, pages = {38:1--38:14}, year = {2019}, url = {https://doi.org/10.1186/s12918-019-0694-y}, doi = {10.1186/S12918-019-0694-Y}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/KCLCYH19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/LiLGY19, author = {Xiaoying Li and Yaping Lin and Changlong Gu and Jialiang Yang}, title = {{FCMDAP:} using miRNA family and cluster information to improve the prediction accuracy of disease related miRNAs}, journal = {{BMC} Syst. Biol.}, volume = {13-S}, number = {2}, pages = {26:1--26:16}, year = {2019}, url = {https://doi.org/10.1186/s12918-019-0696-9}, doi = {10.1186/S12918-019-0696-9}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/LiLGY19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/LiuLZCZDCLZR19, author = {Lunfei Liu and Wenting Liu and Yuxin Zheng and Jisu Chen and Jiong Zhou and Huatuo Dai and Suiqing Cai and Jianjun Liu and Min Zheng and Yunqing Ren}, title = {Anti-TNF- {\(\alpha\)}treatment-related pathways and biomarkers revealed by transcriptome analysis in Chinese psoriasis patients}, journal = {{BMC} Syst. Biol.}, volume = {13-S}, number = {2}, pages = {29:1--29:9}, year = {2019}, url = {https://doi.org/10.1186/s12918-019-0698-7}, doi = {10.1186/S12918-019-0698-7}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/LiuLZCZDCLZR19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/LiuR19, author = {Wenting Liu and Jagath C. Rajapakse}, title = {Fusing gene expressions and transitive protein-protein interactions for inference of gene regulatory networks}, journal = {{BMC} Syst. Biol.}, volume = {13-S}, number = {2}, pages = {37:1--37:13}, year = {2019}, url = {https://doi.org/10.1186/s12918-019-0695-x}, doi = {10.1186/S12918-019-0695-X}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/LiuR19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/SunCLS19, author = {Shiquan Sun and Yabo Chen and Yang Liu and Xuequn Shang}, title = {A fast and efficient count-based matrix factorization method for detecting cell types from single-cell RNAseq data}, journal = {{BMC} Syst. Biol.}, volume = {13-S}, number = {2}, pages = {28:1--28:8}, year = {2019}, url = {https://doi.org/10.1186/s12918-019-0699-6}, doi = {10.1186/S12918-019-0699-6}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/SunCLS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/TabeiKSY19, author = {Yasuo Tabei and Masaaki Kotera and Ryusuke Sawada and Yoshihiro Yamanishi}, title = {Network-based characterization of drug-protein interaction signatures with a space-efficient approach}, journal = {{BMC} Syst. Biol.}, volume = {13-S}, number = {2}, pages = {39:1--39:15}, year = {2019}, url = {https://doi.org/10.1186/s12918-019-0691-1}, doi = {10.1186/S12918-019-0691-1}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/TabeiKSY19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/XuePS19, author = {Hansheng Xue and Jiajie Peng and Xuequn Shang}, title = {Predicting disease-related phenotypes using an integrated phenotype similarity measurement based on {HPO}}, journal = {{BMC} Syst. Biol.}, volume = {13-S}, number = {2}, pages = {34:1--34:12}, year = {2019}, url = {https://doi.org/10.1186/s12918-019-0697-8}, doi = {10.1186/S12918-019-0697-8}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/XuePS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/YeH19, author = {Xiaoxin Ye and Joshua Wing Kei Ho}, title = {Ultrafast clustering of single-cell flow cytometry data using FlowGrid}, journal = {{BMC} Syst. Biol.}, volume = {13-S}, number = {2}, pages = {35:1--35:8}, year = {2019}, url = {https://doi.org/10.1186/s12918-019-0690-2}, doi = {10.1186/S12918-019-0690-2}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/YeH19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenKSCHLL18, author = {Shu{-}Hwa Chen and Wen{-}Yu Kuo and Sheng{-}Yao Su and Wei{-}Chun Chung and Jen{-}Ming Ho and Henry Horng{-}Shing Lu and Chung{-}Yen Lin}, title = {A gene profiling deconvolution approach to estimating immune cell composition from complex tissues}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {4}, pages = {15--23}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2069-6}, doi = {10.1186/S12859-018-2069-6}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenKSCHLL18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GaoWDX18, author = {Yujuan Gao and Sheng Wang and Minghua Deng and Jinbo Xu}, title = {RaptorX-Angle: real-value prediction of protein backbone dihedral angles through a hybrid method of clustering and deep learning}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {4}, pages = {73--84}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2065-x}, doi = {10.1186/S12859-018-2065-X}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/GaoWDX18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GongJDL18, author = {Xiaofeng Gong and Jianping Jiang and Zhongqu Duan and Hui Lu}, title = {A new method to measure the semantic similarity from query phenotypic abnormalities to diseases based on the human phenotype ontology}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {4}, pages = {111--119}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2064-y}, doi = {10.1186/S12859-018-2064-Y}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/GongJDL18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HayashiMYOA18, author = {Takanori Hayashi and Yuri Matsuzaki and Keisuke Yanagisawa and Masahito Ohue and Yutaka Akiyama}, title = {MEGADOCK-Web: an integrated database of high-throughput structure-based protein-protein interaction predictions}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {4}, pages = {61--72}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2073-x}, doi = {10.1186/S12859-018-2073-X}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/HayashiMYOA18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KimLCJP18, author = {Yongkang Kim and Sungyoung Lee and Sungkyoung Choi and Jin{-}Young Jang and Taesung Park}, title = {Hierarchical structural component modeling of microRNA-mRNA integration analysis}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {4}, pages = {25--34}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2070-0}, doi = {10.1186/S12859-018-2070-0}, timestamp = {Mon, 08 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/KimLCJP18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LeeKCHP18, author = {Sungyoung Lee and Yongkang Kim and Sungkyoung Choi and Heungsun Hwang and Taesung Park}, title = {Pathway-based approach using hierarchical components of rare variants to analyze multiple phenotypes}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {4}, pages = {85--97}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2066-9}, doi = {10.1186/S12859-018-2066-9}, timestamp = {Mon, 08 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/LeeKCHP18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Taguchi18, author = {Y{-}h. Taguchi}, title = {Tensor decomposition-based and principal-component-analysis-based unsupervised feature extraction applied to the gene expression and methylation profiles in the brains of social insects with multiple castes}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {4}, pages = {99:1--99:13}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2068-7}, doi = {10.1186/S12859-018-2068-7}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Taguchi18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/TakenakaMSM18, author = {Yoichi Takenaka and Kazuma Mikami and Shigeto Seno and Hideo Matsuda}, title = {Automated transition analysis of activated gene regulation during diauxic nutrient shift in Escherichia coli and adipocyte differentiation in mouse cells}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {4}, pages = {49--59}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2072-y}, doi = {10.1186/S12859-018-2072-Y}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/TakenakaMSM18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YangGLLZSP18, author = {Shunyun Yang and Runxin Guo and Rui Liu and Xiangke Liao and Quan Zou and Benyun Shi and Shaoliang Peng}, title = {cmFSM: a scalable {CPU-MIC} coordinated drug-finding tool by frequent subgraph mining}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {4}, pages = {35--47}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2071-z}, doi = {10.1186/S12859-018-2071-Z}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/YangGLLZSP18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhouWZXL18, author = {Jiyun Zhou and Hongpeng Wang and Zhishan Zhao and Ruifeng Xu and Qin Lu}, title = {CNNH{\_}PSS: protein 8-class secondary structure prediction by convolutional neural network with highway}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {4}, pages = {99--109}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2067-8}, doi = {10.1186/S12859-018-2067-8}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhouWZXL18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/AnselmettiDTCB18, author = {Yoann Anselmetti and Wandrille Duchemin and Eric Tannier and C{\'{e}}dric Chauve and S{\`{e}}verine B{\'{e}}rard}, title = {Phylogenetic signal from rearrangements in 18 Anopheles species by joint scaffolding extant and ancestral genomes}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4466-7}, doi = {10.1186/S12864-018-4466-7}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/AnselmettiDTCB18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChenZLHXHL18, author = {Wen Chen and Xuan Zhang and Jing Li and Shulan Huang and Shuanglin Xiang and Xiang Hu and Changning Liu}, title = {Comprehensive analysis of coding-lncRNA gene co-expression network uncovers conserved functional lncRNAs in zebrafish}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4458-7}, doi = {10.1186/S12864-018-4458-7}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChenZLHXHL18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChoiLPCBLWRKH18, author = {Yoonha Choi and Tiffany Ting Liu and Daniel G. Pankratz and Thomas V. Colby and Neil M. Barth and David A. Lynch and P. Sean Walsh and Ganesh Raghu and Giulia C. Kennedy and Jing Huang}, title = {Identification of usual interstitial pneumonia pattern using RNA-Seq and machine learning: challenges and solutions}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4467-6}, doi = {10.1186/S12864-018-4467-6}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChoiLPCBLWRKH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChouHHHHLCLHLCH18, author = {Chih{-}Hung Chou and Hsi{-}Yuan Huang and Wei{-}Chih Huang and Sheng{-}Da Hsu and Chung{-}Der Hsiao and Chia{-}Yu Liu and Yu{-}Hung Chen and Yu{-}Chen Liu and Wei{-}Yun Huang and Meng{-}Lin Lee and Yi{-}Chang Chen and Hsien{-}Da Huang}, title = {The aquatic animals' transcriptome resource for comparative functional analysis}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4463-x}, doi = {10.1186/S12864-018-4463-X}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChouHHHHLCLHLCH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChowCCZLWTHC18, author = {Chi{-}Nga Chow and Yi{-}Fan Chiang{-}Hsieh and Chia{-}Hung Chien and Han{-}Qin Zheng and Tzong{-}Yi Lee and Nai{-}Yun Wu and Kuan{-}Chieh Tseng and Ping{-}Fu Hou and Wen{-}Chi Chang}, title = {Delineation of condition specific Cis- and Trans-acting elements in plant promoters under various Endo- and exogenous stimuli}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4469-4}, doi = {10.1186/S12864-018-4469-4}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChowCCZLWTHC18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/HeSFP18, author = {Dan He and Subrata Saha and Richard Finkers and Laxmi Parida}, title = {Efficient algorithms for polyploid haplotype phasing}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4464-9}, doi = {10.1186/S12864-018-4464-9}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/HeSFP18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/HuangLCHYYCT18, author = {Po{-}Jung Huang and Chi{-}Ching Lee and Ling{-}Ya Chiu and Kuo{-}Yang Huang and Yuan{-}Ming Yeh and Chia{-}Yu Yang and Cheng{-}Hsun Chiu and Petrus Tang}, title = {VAReporter: variant reporter for cancer research of massive parallel sequencing}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4468-5}, doi = {10.1186/S12864-018-4468-5}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/HuangLCHYYCT18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/KimCXLGAHEAM18, author = {Jeremie S. Kim and Damla Senol Cali and Hongyi Xin and Donghyuk Lee and Saugata Ghose and Mohammed Alser and Hasan Hassan and Oguz Ergin and Can Alkan and Onur Mutlu}, title = {GRIM-Filter: Fast seed location filtering in {DNA} read mapping using processing-in-memory technologies}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4460-0}, doi = {10.1186/S12864-018-4460-0}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/KimCXLGAHEAM18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiuHYLHH18, author = {Yu{-}Chen Liu and Hsiao{-}Chin Hong and Chi{-}Dung Yang and Wei{-}Hsiang Lee and Hsin{-}Tzu Huang and Hsien{-}Da Huang}, title = {Ouroboros resembling competitive endogenous loop {(ORCEL)} in circular RNAs revealed through transcriptome sequencing dataset analysis}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4456-9}, doi = {10.1186/S12864-018-4456-9}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuHYLHH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiuRGWZLLSZ18, author = {Li Liu and Shuchao Ren and Junqiang Guo and Qingyi Wang and Xiaotuo Zhang and Peiran Liao and Shipeng Li and Ramanjulu Sunkar and Yun Zheng}, title = {Genome-wide identification and comprehensive analysis of microRNAs and phased small interfering RNAs in watermelon}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4457-8}, doi = {10.1186/S12864-018-4457-8}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuRGWZLLSZ18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/NoutahiE18, author = {Emmanuel Noutahi and Nadia El{-}Mabrouk}, title = {{GATC:} a genetic algorithm for gene tree construction under the Duplication-Transfer-Loss model of evolution}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4455-x}, doi = {10.1186/S12864-018-4455-X}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/NoutahiE18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ValenzuelaNVPM18, author = {Daniel Valenzuela and Tuukka Norri and Niko V{\"{a}}lim{\"{a}}ki and Esa Pitk{\"{a}}nen and Veli M{\"{a}}kinen}, title = {Towards pan-genome read alignment to improve variation calling}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4465-8}, doi = {10.1186/S12864-018-4465-8}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ValenzuelaNVPM18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ZengWJ18, author = {Wanwen Zeng and Mengmeng Wu and Rui Jiang}, title = {Prediction of enhancer-promoter interactions via natural language processing}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4459-6}, doi = {10.1186/S12864-018-4459-6}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ZengWJ18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ZhengJTS18, author = {Chunfang Zheng and Yuji Jeong and Madisyn Gabrielle Turcotte and David Sankoff}, title = {Resolution effects in reconstructing ancestral genomes}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4462-y}, doi = {10.1186/S12864-018-4462-Y}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhengJTS18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ZhouZIYRCK18, author = {Xinrui Zhou and Jie Zheng and Fransiskus Xaverius Ivan and Rui Yin and Shoba Ranganathan and Vincent T. K. Chow and Chee{-}Keong Kwoh}, title = {Computational analysis of the receptor binding specificity of novel influenza {A/H7N9} viruses}, journal = {{BMC} Genom.}, volume = {19}, number = {{S2}}, year = {2018}, url = {https://doi.org/10.1186/s12864-018-4461-z}, doi = {10.1186/S12864-018-4461-Z}, timestamp = {Wed, 17 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhouZIYRCK18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/BuigaETS18, author = {Petronela Buiga and Ari Elson and Lydia Tabernero and Jean{-}Marc Schwartz}, title = {Regulation of dual specificity phosphatases in breast cancer during initial treatment with Herceptin: a Boolean model analysis}, journal = {{BMC} Syst. Biol.}, volume = {12}, number = {1}, pages = {13--24}, year = {2018}, url = {https://doi.org/10.1186/s12918-018-0534-5}, doi = {10.1186/S12918-018-0534-5}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/BuigaETS18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/LyuCJDFL18, author = {Mengxuan Lyu and Jiaxing Chen and Yiqi Jiang and Wei Dong and Zhou Fang and Shuai Cheng Li}, title = {KDiamend: a package for detecting key drivers in a molecular ecological network of disease}, journal = {{BMC} Syst. Biol.}, volume = {12}, number = {1}, pages = {89--99}, year = {2018}, url = {https://doi.org/10.1186/s12918-018-0531-8}, doi = {10.1186/S12918-018-0531-8}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/LyuCJDFL18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/MoriNHAN18, author = {Takuya Mori and Hayliang Ngouv and Morihiro Hayashida and Tatsuya Akutsu and Jose C. Nacher}, title = {ncRNA-disease association prediction based on sequence information and tripartite network}, journal = {{BMC} Syst. Biol.}, volume = {12}, number = {1}, pages = {41--51}, year = {2018}, url = {https://doi.org/10.1186/s12918-018-0527-4}, doi = {10.1186/S12918-018-0527-4}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/MoriNHAN18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/MukherjeeHBK18, author = {Kingshuk Mukherjee and Md Mahmudul Hasan and Christina Boucher and Tamer Kahveci}, title = {Counting motifs in dynamic networks}, journal = {{BMC} Syst. Biol.}, volume = {12}, number = {1}, pages = {1--12}, year = {2018}, url = {https://doi.org/10.1186/s12918-018-0533-6}, doi = {10.1186/S12918-018-0533-6}, timestamp = {Mon, 10 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/MukherjeeHBK18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/QiuJCC18, author = {Yushan Qiu and Hao Jiang and Wai{-}Ki Ching and Xiaoqing Cheng}, title = {Discovery of Boolean metabolic networks: integer linear programming based approach}, journal = {{BMC} Syst. Biol.}, volume = {12}, number = {1}, pages = {53--60}, year = {2018}, url = {https://doi.org/10.1186/s12918-018-0528-3}, doi = {10.1186/S12918-018-0528-3}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/QiuJCC18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/RanjanCZ18, author = {Bobby Ranjan and Ket Hing Chong and Jie Zheng}, title = {Composite mathematical modeling of calcium signaling behind neuronal cell death in Alzheimer's disease}, journal = {{BMC} Syst. Biol.}, volume = {12}, number = {1}, pages = {61--74}, year = {2018}, url = {https://doi.org/10.1186/s12918-018-0529-2}, doi = {10.1186/S12918-018-0529-2}, timestamp = {Thu, 02 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/RanjanCZ18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/TeraguchiK18, author = {Shunsuke Teraguchi and Yutaro Kumagai}, title = {Estimation of diffusion constants from single molecular measurement without explicit tracking}, journal = {{BMC} Syst. Biol.}, volume = {12}, number = {1}, pages = {25--39}, year = {2018}, url = {https://doi.org/10.1186/s12918-018-0526-5}, doi = {10.1186/S12918-018-0526-5}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/TeraguchiK18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/YimYJL18, author = {Soorin Yim and Hasun Yu and Dongjin Jang and Doheon Lee}, title = {Annotating activation/inhibition relationships to protein-protein interactions using gene ontology relations}, journal = {{BMC} Syst. Biol.}, volume = {12}, number = {1}, pages = {111--122}, year = {2018}, url = {https://doi.org/10.1186/s12918-018-0535-4}, doi = {10.1186/S12918-018-0535-4}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/YimYJL18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/YuMSHCDY18, author = {Hui Yu and Kui{-}Tao Mao and Jian{-}Yu Shi and Hua Huang and Zhi Chen and Kai Dong and Siu{-}Ming Yiu}, title = {Predicting and understanding comprehensive drug-drug interactions via semi-nonnegative matrix factorization}, journal = {{BMC} Syst. Biol.}, volume = {12}, number = {1}, pages = {101--110}, year = {2018}, url = {https://doi.org/10.1186/s12918-018-0532-7}, doi = {10.1186/S12918-018-0532-7}, timestamp = {Thu, 27 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/YuMSHCDY18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/Zhang18, author = {Shuqin Zhang}, title = {Comparisons of gene coexpression network modules in breast cancer and ovarian cancer}, journal = {{BMC} Syst. Biol.}, volume = {12}, number = {1}, pages = {75--87}, year = {2018}, url = {https://doi.org/10.1186/s12918-018-0530-9}, doi = {10.1186/S12918-018-0530-9}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/Zhang18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AlankoCBM17, author = {Jarno Alanko and Fabio Cunial and Djamal Belazzougui and Veli M{\"{a}}kinen}, title = {A framework for space-efficient read clustering in metagenomic samples}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {49--60}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1466-6}, doi = {10.1186/S12859-017-1466-6}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/AlankoCBM17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Bansal17, author = {Vikas Bansal}, title = {A computational method for estimating the {PCR} duplication rate in {DNA} and RNA-seq experiments}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {113--123}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1471-9}, doi = {10.1186/S12859-017-1471-9}, timestamp = {Fri, 09 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Bansal17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenHZHXG17, author = {Shifu Chen and Tanxiao Huang and Yanqing Zhou and Yue Han and Mingyan Xu and Jia Gu}, title = {AfterQC: automatic filtering, trimming, error removing and quality control for fastq data}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {91--100}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1469-3}, doi = {10.1186/S12859-017-1469-3}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenHZHXG17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GongZZWSZB17, author = {Hai'e Gong and Haicang Zhang and Jianwei Zhu and Chao Wang and Shiwei Sun and Wei{-}Mou Zheng and Dongbo Bu}, title = {Improving prediction of burial state of residues by exploiting correlation among residues}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {165--175}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1475-5}, doi = {10.1186/S12859-017-1475-5}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/GongZZWSZB17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Lai17, author = {Yinglei Lai}, title = {A statistical method for the conservative adjustment of false discovery rate (q-value)}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {155--163}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1474-6}, doi = {10.1186/S12859-017-1474-6}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Lai17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MaSL17, author = {Weiyun Ma and Dmitriy Smirnov and Ran Libeskind{-}Hadas}, title = {{DTL} reconciliation repair}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {13--21}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1463-9}, doi = {10.1186/S12859-017-1463-9}, timestamp = {Sun, 06 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/MaSL17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SunWW17, author = {Lei Sun and Jun Wang and Jinmao Wei}, title = {{AVC:} Selecting discriminative features on basis of {AUC} by maximizing variable complementarity}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {73--89}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1468-4}, doi = {10.1186/S12859-017-1468-4}, timestamp = {Fri, 30 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/SunWW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/TennakoonS17, author = {Chandana Tennakoon and Wing{-}Kin Sung}, title = {{BATVI:} Fast, sensitive and accurate detection of virus integrations}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {101--111}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1470-x}, doi = {10.1186/S12859-017-1470-X}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/TennakoonS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/TienCW17, author = {Wei{-}Sheng Tien and Jun{-}Hong Chen and Kun{-}Pin Wu}, title = {SheddomeDB: the ectodomain shedding database for membrane-bound shed markers}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {31--48}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1465-7}, doi = {10.1186/S12859-017-1465-7}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/TienCW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WengHKHKCWLL17, author = {Shun{-}Long Weng and Kai{-}Yao Huang and Fergie Joanda Kaunang and Chien{-}Hsun Huang and Hui{-}Ju Kao and Tzu{-}Hao Chang and Hsin{-}Yao Wang and Jang{-}Jih Lu and Tzong{-}Yi Lee}, title = {Investigation and identification of protein carbonylation sites based on position-specific amino acid composition and physicochemical features}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {125--141}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1472-8}, doi = {10.1186/S12859-017-1472-8}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WengHKHKCWLL17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/XiaLDX17, author = {Yuchao Xia and Yun Liu and Minghua Deng and Ruibin Xi}, title = {Pysim-sv: a package for simulating structural variation data with GC-biases}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {23--30}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1464-8}, doi = {10.1186/S12859-017-1464-8}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/XiaLDX17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhangL0L17, author = {Junpeng Zhang and Thuc Duy Le and Lin Liu and Jiuyong Li}, title = {Identifying miRNA sponge modules using biclustering and regulatory scores}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {61--72}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1467-5}, doi = {10.1186/S12859-017-1467-5}, timestamp = {Thu, 29 Sep 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhangL0L17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhangLSZC17, author = {Chuanchao Zhang and Juan Liu and Qianqian Shi and Tao Zeng and Luonan Chen}, title = {Comparative network stratification analysis for identifying functional interpretable network biomarkers}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {1--12}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1462-x}, doi = {10.1186/S12859-017-1462-X}, timestamp = {Thu, 05 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhangLSZC17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhangYRAFS17, author = {Mengge Zhang and Lianping Yang and Jie Ren and Nathan A. Ahlgren and Jed A. Fuhrman and Fengzhu Sun}, title = {Prediction of virus-host infectious association by supervised learning methods}, journal = {{BMC} Bioinform.}, volume = {18}, number = {{S-3}}, pages = {143--154}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1473-7}, doi = {10.1186/S12859-017-1473-7}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhangYRAFS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/BalvociuteH17, author = {Monika Balvociute and Daniel H. Huson}, title = {SILVA, RDP, Greengenes, {NCBI} and {OTT} - how do these taxonomies compare?}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3501-4}, doi = {10.1186/S12864-017-3501-4}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/BalvociuteH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChenPL17, author = {Vicky Chen and John W. Paisley and Xinghua Lu}, title = {Revealing common disease mechanisms shared by tumors of different tissues of origin through semantic representation of genomic alterations and topic modeling}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3494-z}, doi = {10.1186/S12864-017-3494-Z}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChenPL17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/FengLZZCSM17, author = {Xiao{-}dong Feng and Li{-}wei Li and Jianhong Zhang and Yun{-}ping Zhu and Cheng Chang and Kun{-}xian Shu and Jie Ma}, title = {Using the entrapment sequence method as a standard to evaluate key steps of proteomics data analysis process}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3491-2}, doi = {10.1186/S12864-017-3491-2}, timestamp = {Fri, 17 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/FengLZZCSM17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/GohW17, author = {Wilson Wen Bin Goh and Limsoon Wong}, title = {Protein complex-based analysis is resistant to the obfuscating consequences of batch effects - a case study in clinical proteomics}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3490-3}, doi = {10.1186/S12864-017-3490-3}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/GohW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/HsuHCY17, author = {Hui{-}Hui Hsu and Yen{-}Chao Hsu and Li{-}Jen Chang and Jinn{-}Moon Yang}, title = {An integrated approach with new strategies for {QSAR} models and lead optimization}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3503-2}, doi = {10.1186/S12864-017-3503-2}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/HsuHCY17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LeemP17, author = {Sangseob Leem and Taesung Park}, title = {An empirical fuzzy multifactor dimensionality reduction method for detecting gene-gene interactions}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3496-x}, doi = {10.1186/S12864-017-3496-X}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LeemP17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiPHZH17, author = {Dong Li and Zhisong Pan and Guyu Hu and Zexuan Zhu and Shan He}, title = {Active module identification in intracellular networks using a memetic algorithm with a new binary decoding scheme}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3495-y}, doi = {10.1186/S12864-017-3495-Y}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiPHZH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiuCKH17, author = {Yu{-}Chen Liu and Wen Liang Chen and Wei{-}Hsiang Kung and Hsien{-}Da Huang}, title = {Plant miRNAs found in human circulating system provide evidences of cross kingdom RNAi}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3502-3}, doi = {10.1186/S12864-017-3502-3}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuCKH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LuZL17, author = {Bingxin Lu and Louxin Zhang and Hon Wai Leong}, title = {A program to compute the soft Robinson-Foulds distance between phylogenetic networks}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3500-5}, doi = {10.1186/S12864-017-3500-5}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LuZL17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/PengYGLLYWY17, author = {Shaoliang Peng and Shunyun Yang and Ming Gao and Xiangke Liao and Jie Liu and Canqun Yang and Chengkun Wu and Wenqiang Yu}, title = {P-Hint-Hunt: a deep parallelized whole genome {DNA} methylation detection tool}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3497-9}, doi = {10.1186/S12864-017-3497-9}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/PengYGLLYWY17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/RenSEL17, author = {Jing Ren and Jiangning Song and John T. Ellis and Jinyan Li}, title = {Staged heterogeneity learning to identify conformational B-cell epitopes from antigen sequences}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3493-0}, doi = {10.1186/S12864-017-3493-0}, timestamp = {Thu, 16 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/RenSEL17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/SunKT17, author = {Shuhao Sun and Fima C. Klebaner and Tianhai Tian}, title = {Mathematical modelling for variations of inbreeding populations fitness with single and polygenic traits}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3492-1}, doi = {10.1186/S12864-017-3492-1}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/SunKT17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/TadaTA17, author = {Ipputa Tada and Yasuhiro Tanizawa and Masanori Arita}, title = {Visualization of consensus genome structure without using a reference genome}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3499-7}, doi = {10.1186/S12864-017-3499-7}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/TadaTA17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/YangHHK17, author = {Yang Yang and Ning Huang and Luning Hao and Wei Kong}, title = {A clustering-based approach for efficient identification of microRNA combinatorial biomarkers}, journal = {{BMC} Genom.}, volume = {18}, number = {{S2}}, year = {2017}, url = {https://doi.org/10.1186/s12864-017-3498-8}, doi = {10.1186/S12864-017-3498-8}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/YangHHK17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/Balasubramanian17, author = {Pavithra K. Balasubramanian and Anand Balupuri and Hee{-}Young Kang and Seung Joo Cho}, title = {Receptor-guided 3D-QSAR studies, molecular dynamics simulation and free energy calculations of Btk kinase inhibitors}, journal = {{BMC} Syst. Biol.}, volume = {11}, number = {{S-2}}, pages = {6:1--6:11}, year = {2017}, url = {https://doi.org/10.1186/s12918-017-0385-5}, doi = {10.1186/S12918-017-0385-5}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/Balasubramanian17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/ChenLH17, author = {Weiqi Chen and Jing Liu and Shan He}, title = {Prior knowledge guided active modules identification: an integrated multi-objective approach}, journal = {{BMC} Syst. Biol.}, volume = {11}, number = {{S-2}}, pages = {8:1--8:12}, year = {2017}, url = {https://doi.org/10.1186/s12918-017-0388-2}, doi = {10.1186/S12918-017-0388-2}, timestamp = {Thu, 25 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/ChenLH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/ChengHWLGZ17, author = {Zhanzhan Cheng and Kai Huang and Yang Wang and Hui Liu and Jihong Guan and Shuigeng Zhou}, title = {Selecting high-quality negative samples for effectively predicting protein-RNA interactions}, journal = {{BMC} Syst. Biol.}, volume = {11}, number = {{S-2}}, pages = {9:1--9:11}, year = {2017}, url = {https://doi.org/10.1186/s12918-017-0390-8}, doi = {10.1186/S12918-017-0390-8}, timestamp = {Mon, 19 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/ChengHWLGZ17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/ChoiPCLH17, author = {Daesik Choi and Byungkyu Park and Hanju Chae and Wook Lee and Kyungsook Han}, title = {Predicting protein-binding regions in {RNA} using nucleotide profiles and compositions}, journal = {{BMC} Syst. Biol.}, volume = {11}, number = {{S-2}}, pages = {16:1--16:12}, year = {2017}, url = {https://doi.org/10.1186/s12918-017-0386-4}, doi = {10.1186/S12918-017-0386-4}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/ChoiPCLH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/LiuGJ17, author = {Qiao Liu and Mingxin Gan and Rui Jiang}, title = {A sequence-based method to predict the impact of regulatory variants using random forest}, journal = {{BMC} Syst. Biol.}, volume = {11}, number = {{S-2}}, pages = {7:1--7:9}, year = {2017}, url = {https://doi.org/10.1186/s12918-017-0389-1}, doi = {10.1186/S12918-017-0389-1}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/LiuGJ17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/MoonLJLSK17, author = {Ji Hwan Moon and Sangsoo Lim and Kyuri Jo and Sangseon Lee and Seokjun Seo and Sun Kim}, title = {PINTnet: construction of condition-specific pathway interaction network by computing shortest paths on weighted {PPI}}, journal = {{BMC} Syst. Biol.}, volume = {11}, number = {{S-2}}, pages = {15:1--15:13}, year = {2017}, url = {https://doi.org/10.1186/s12918-017-0387-3}, doi = {10.1186/S12918-017-0387-3}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/MoonLJLSK17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenCCL16, author = {Lujia Chen and Chunhui Cai and Vicky Chen and Xinghua Lu}, title = {Learning a hierarchical representation of the yeast transcriptomic machinery using an autoencoder model}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-1}}, pages = {9}, year = {2016}, url = {https://doi.org/10.1186/s12859-015-0852-1}, doi = {10.1186/S12859-015-0852-1}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenCCL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/FanLHCD16, author = {Chao Fan and Diwei Liu and Rui Huang and Zhigang Chen and Lei Deng}, title = {PredRSA: a gradient boosted regression trees approach for predicting protein solvent accessibility}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-1}}, pages = {8}, year = {2016}, url = {https://doi.org/10.1186/s12859-015-0851-2}, doi = {10.1186/S12859-015-0851-2}, timestamp = {Tue, 20 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/FanLHCD16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuangCHHN16, author = {Chien{-}Hung Huang and Peter Mu{-}Hsin Chang and Chia{-}Wei Hsu and Chi{-}Ying F. Huang and Ka{-}Lok Ng}, title = {Drug repositioning for non-small cell lung cancer by using machine learning algorithms and topological graph theory}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-1}}, pages = {2}, year = {2016}, url = {https://doi.org/10.1186/s12859-015-0845-0}, doi = {10.1186/S12859-015-0845-0}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/HuangCHHN16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JainRKBLH16, author = {Suvir Jain and Kashyap R. and Tsung{-}Ting Kuo and Shitij Bhargava and Gordon Lin and Chun{-}Nan Hsu}, title = {Weakly supervised learning of biomedical information extraction from curated data}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-1}}, pages = {1}, year = {2016}, url = {https://doi.org/10.1186/s12859-015-0844-1}, doi = {10.1186/S12859-015-0844-1}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JainRKBLH16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KumarB16, author = {Sunil Kumar and Philipp Bucher}, title = {Predicting transcription factor site occupancy using {DNA} sequence intrinsic and cell-type specific chromatin features}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-1}}, pages = {4}, year = {2016}, url = {https://doi.org/10.1186/s12859-015-0846-z}, doi = {10.1186/S12859-015-0846-Z}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KumarB16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LeeWHHLW16, author = {Shih{-}Wei Lee and Lawrence Shih{-}Hsin Wu and Guan{-}Mau Huang and Kai{-}Yao Huang and Tzong{-}Yi Lee and Julia Tzu{-}Ya Weng}, title = {Gene expression profiling identifies candidate biomarkers for active and latent tuberculosis}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-1}}, pages = {3}, year = {2016}, url = {https://doi.org/10.1186/s12859-015-0848-x}, doi = {10.1186/S12859-015-0848-X}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LeeWHHLW16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LyuL16, author = {Yafei Lyu and Qunhua Li}, title = {A semi-parametric statistical model for integrating gene expression profiles across different platforms}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-1}}, pages = {5}, year = {2016}, url = {https://doi.org/10.1186/s12859-015-0847-y}, doi = {10.1186/S12859-015-0847-Y}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LyuL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PaganKLTMTKWSHW16, author = {Moraima Pagan and Richard T. Kloos and Chu{-}Fang Lin and Kevin J. Travers and Hajime Matsuzaki and Ed Y. Tom and Su Yeon Kim and Mei G. Wong and Andrew C. Stewart and Jing Huang and P. Sean Walsh and Robert J. Monroe and Giulia C. Kennedy}, title = {The diagnostic application of {RNA} sequencing in patients with thyroid cancer: an analysis of 851 variants and 133 fusions in 524 genes}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-1}}, pages = {6}, year = {2016}, url = {https://doi.org/10.1186/s12859-015-0849-9}, doi = {10.1186/S12859-015-0849-9}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/PaganKLTMTKWSHW16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WangHKXQ16, author = {Henan Wang and Chong He and Garima Kushwaha and Dong Xu and Jing Qiu}, title = {A full Bayesian partition model for identifying hypo- and hyper-methylated loci from single nucleotide resolution sequencing data}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-1}}, pages = {7}, year = {2016}, url = {https://doi.org/10.1186/s12859-015-0850-3}, doi = {10.1186/S12859-015-0850-3}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WangHKXQ16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YangXS16, author = {Yang Yang and Zhuangdi Xu and Dandan Song}, title = {Missing value imputation for microRNA expression data by using a GO-based similarity measure}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-1}}, pages = {10}, year = {2016}, url = {https://doi.org/10.1186/s12859-015-0853-0}, doi = {10.1186/S12859-015-0853-0}, timestamp = {Tue, 17 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/YangXS16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/BuiWLCWL16, author = {Van{-}Minh Bui and Shun{-}Long Weng and Cheng{-}Tsung Lu and Tzu{-}Hao Chang and Julia Tzu{-}Ya Weng and Tzong{-}Yi Lee}, title = {SOHSite: incorporating evolutionary information and physicochemical properties to identify protein \emph{S}-sulfenylation sites}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {9}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2299-1}, doi = {10.1186/S12864-015-2299-1}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/BuiWLCWL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/HeLTMZ16, author = {Feifei He and Yang Li and Yu{-}Hang Tang and Jian Ma and Huaiqiu Zhu}, title = {Identifying micro-inversions using high-throughput sequencing reads}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {4}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2305-7}, doi = {10.1186/S12864-015-2305-7}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/HeLTMZ16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/HejaseL16, author = {Hussein A. Hejase and Kevin J. Liu}, title = {Mapping the genomic architecture of adaptive traits with interspecific introgressive origin: a coalescent-based approach}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {8}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2298-2}, doi = {10.1186/S12864-015-2298-2}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/HejaseL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/JiangY16, author = {Wei Jiang and Weichuan Yu}, title = {Power estimation and sample size determination for replication studies of genome-wide association studies}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {3}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2296-4}, doi = {10.1186/S12864-015-2296-4}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/JiangY16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/Karim0LL16, author = {S. M. Masud Karim and Lin Liu and Thuc Duy Le and Jiuyong Li}, title = {Identification of miRNA-mRNA regulatory modules by exploring collective group relationships}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {7}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2300-z}, doi = {10.1186/S12864-015-2300-Z}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/Karim0LL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/KimHK16, author = {Min{-}Su Kim and Benjamin Hur and Sun Kim}, title = {RDDpred: a condition-specific RNA-editing prediction model from RNA-seq data}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {5}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2301-y}, doi = {10.1186/S12864-015-2301-Y}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/KimHK16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiRL16, author = {Wei Vivian Li and Zahra S. Razaee and Jingyi Jessica Li}, title = {Epigenome overlap measure {(EPOM)} for comparing tissue/cell types based on chromatin states}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {10}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2303-9}, doi = {10.1186/S12864-015-2303-9}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiRL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiuHCHCLLHAAHH16, author = {Yu{-}Chen Liu and Sheng{-}Da Hsu and Chih{-}Hung Chou and Wei{-}Yun Huang and Yu{-}Hung Chen and Chia{-}Yu Liu and Guan{-}Jay Lyu and Shao{-}Zhen Huang and Sergey Aganezov Jr. and Max A. Alekseyev and Chung{-}Der Hsiao and Hsien{-}Da Huang}, title = {Transcriptome sequencing based annotation and homologous evidence based scaffolding of \emph{Anguilla japonica} draft genome}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {13}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2306-6}, doi = {10.1186/S12864-015-2306-6}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuHCHCLLHAAHH16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/NairHSGLBM16, author = {Nishanth Ulhas Nair and Laura Hunter and Mingfu Shao and Paulina Grnarova and Yu Lin and Philipp Bucher and Bernard M. E. Moret}, title = {A maximum-likelihood approach for building cell-type trees by lifting}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {14}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2297-3}, doi = {10.1186/S12864-015-2297-3}, timestamp = {Tue, 31 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/NairHSGLBM16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/NariaiKMKN16, author = {Naoki Nariai and Kaname Kojima and Takahiro Mimori and Yosuke Kawai and Masao Nagasaki}, title = {A Bayesian approach for estimating allele-specific expression from RNA-Seq data with diploid genomes}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {2}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2295-5}, doi = {10.1186/S12864-015-2295-5}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/NariaiKMKN16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/PaszekG16, author = {Jaroslaw Paszek and Pawel G{\'{o}}recki}, title = {Genomic duplication problems for unrooted gene trees}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {15}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2308-4}, doi = {10.1186/S12864-015-2308-4}, timestamp = {Fri, 17 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/PaszekG16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/RomanXS16, author = {Theodore Roman and Lu Xie and Russell Schwartz}, title = {Medoidshift clustering applied to genomic bulk tumor data}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {6}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2302-x}, doi = {10.1186/S12864-015-2302-X}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/RomanXS16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/TeraiIKHA16, author = {Goro Terai and Junichi Iwakiri and Tomoshi Kameda and Michiaki Hamada and Kiyoshi Asai}, title = {Comprehensive prediction of lncRNA-RNA interactions in human transcriptome}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {12}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2307-5}, doi = {10.1186/S12864-015-2307-5}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/TeraiIKHA16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/YeL16, author = {Yuting Ye and Jingyi Jessica Li}, title = {{NMFP:} a non-negative matrix factorization based preselection method to increase accuracy of identifying mRNA isoforms from RNA-seq data}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {11}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2304-8}, doi = {10.1186/S12864-015-2304-8}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/YeL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ZhengS16, author = {Chunfang Zheng and David Sankoff}, title = {Locating rearrangement events in a phylogeny based on highly fragmented assemblies}, journal = {{BMC} Genom.}, volume = {17}, number = {{S-1}}, pages = {1}, year = {2016}, url = {https://doi.org/10.1186/s12864-015-2294-6}, doi = {10.1186/S12864-015-2294-6}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhengS16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/ChangHLTTCW16, author = {Hsin{-}Chuan Chang and Tsung{-}Han Hsieh and Yi{-}Wei Lee and Cheng{-}Fong Tsai and Ya{-}Ni Tsai and Cheng{-}Chung Cheng and Hsei{-}Wei Wang}, title = {c-Myc and viral cofactor Kaposin {B} co-operate to elicit angiogenesis through modulating miRNome traits of endothelial cells}, journal = {{BMC} Syst. Biol.}, volume = {10}, number = {{S-1}}, pages = {1}, year = {2016}, url = {https://doi.org/10.1186/s12918-015-0242-3}, doi = {10.1186/S12918-015-0242-3}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/ChangHLTTCW16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/HuangSKJWL16, author = {Chien{-}Hsun Huang and Min{-}Gang Su and Hui{-}Ju Kao and Jhih{-}Hua Jhong and Shun{-}Long Weng and Tzong{-}Yi Lee}, title = {UbiSite: incorporating two-layered machine learning method with substrate motifs to predict ubiquitin-conjugation site on lysines}, journal = {{BMC} Syst. Biol.}, volume = {10}, number = {{S-1}}, pages = {6}, year = {2016}, url = {https://doi.org/10.1186/s12918-015-0246-z}, doi = {10.1186/S12918-015-0246-Z}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/HuangSKJWL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/HuangWLW16, author = {Kai{-}Yao Huang and Julia Tzu{-}Ya Weng and Tzong{-}Yi Lee and Shun{-}Long Weng}, title = {A new scheme to discover functional associations and regulatory networks of {E3} ubiquitin ligases}, journal = {{BMC} Syst. Biol.}, volume = {10}, number = {{S-1}}, pages = {3}, year = {2016}, url = {https://doi.org/10.1186/s12918-015-0244-1}, doi = {10.1186/S12918-015-0244-1}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/HuangWLW16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/MangericaoPZ16, author = {Tatiana C. Mangericao and Zhanhao Peng and Xuegong Zhang}, title = {Computational prediction of {CRISPR} cassettes in gut metagenome samples from Chinese type-2 diabetic patients and healthy controls}, journal = {{BMC} Syst. Biol.}, volume = {10}, number = {{S-1}}, pages = {5}, year = {2016}, url = {https://doi.org/10.1186/s12918-015-0248-x}, doi = {10.1186/S12918-015-0248-X}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/MangericaoPZ16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/PlattBZP16, author = {Daniel E. Platt and Saugata Basu and Pierre A. Zalloua and Laxmi Parida}, title = {Characterizing redescriptions using persistent homology to isolate genetic pathways contributing to pathogenesis}, journal = {{BMC} Syst. Biol.}, volume = {10}, number = {{S-1}}, pages = {10}, year = {2016}, url = {https://doi.org/10.1186/s12918-015-0251-2}, doi = {10.1186/S12918-015-0251-2}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/PlattBZP16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/QinLSL16, author = {Wenyi Qin and Cong Liu and Monsheel Sodhi and Hui Lu}, title = {Meta-analysis of sex differences in gene expression in schizophrenia}, journal = {{BMC} Syst. Biol.}, volume = {10}, number = {{S-1}}, pages = {9}, year = {2016}, url = {https://doi.org/10.1186/s12918-015-0250-3}, doi = {10.1186/S12918-015-0250-3}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/QinLSL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/YuCPJKL16, author = {Hasun Yu and Sungji Choo and Junseok Park and Jinmyung Jung and Yeeok Kang and Doheon Lee}, title = {Prediction of drugs having opposite effects on disease genes in a directed network}, journal = {{BMC} Syst. Biol.}, volume = {10}, number = {{S-1}}, pages = {2}, year = {2016}, url = {https://doi.org/10.1186/s12918-015-0243-2}, doi = {10.1186/S12918-015-0243-2}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/YuCPJKL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/YuanLTD16, author = {Huili Yuan and Zhenye Li and Nelson L. S. Tang and Minghua Deng}, title = {A network based covariance test for detecting multivariate eQTL in saccharomyces cerevisiae}, journal = {{BMC} Syst. Biol.}, volume = {10}, number = {{S-1}}, pages = {8}, year = {2016}, url = {https://doi.org/10.1186/s12918-015-0245-0}, doi = {10.1186/S12918-015-0245-0}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/YuanLTD16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/ZhangCS16, author = {Wangshu Zhang and Marcelo P. Coba and Fengzhu Sun}, title = {Inference of domain-disease associations from domain-protein, protein-disease and disease-disease relationships}, journal = {{BMC} Syst. Biol.}, volume = {10}, number = {{S-1}}, pages = {4}, year = {2016}, url = {https://doi.org/10.1186/s12918-015-0247-y}, doi = {10.1186/S12918-015-0247-Y}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/ZhangCS16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/ZhangCZLPZ16, author = {Fan Zhang and Haoting Chen and Li Na Zhao and Hui Liu and Teresa M. Przytycka and Jie Zheng}, title = {Generalized logical model based on network topology to capture the dynamical trends of cellular signaling pathways}, journal = {{BMC} Syst. Biol.}, volume = {10}, number = {{S-1}}, pages = {7}, year = {2016}, url = {https://doi.org/10.1186/s12918-015-0249-9}, doi = {10.1186/S12918-015-0249-9}, timestamp = {Wed, 07 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/ZhangCZLPZ16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HeWP15, author = {Dan He and Zhanyong Wang and Laxmi Parida}, title = {Data-driven encoding for quantitative genetic trait prediction}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-1}}, pages = {S10}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-s1-s10}, doi = {10.1186/1471-2105-16-S1-S10}, timestamp = {Tue, 06 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/HeWP15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuangHLW15, author = {Guan{-}Mau Huang and Kai{-}Yao Huang and Tzong{-}Yi Lee and Julia Weng}, title = {An interpretable rule-based diagnostic classification of diabetic nephropathy among type 2 diabetes patients}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-1}}, pages = {S5}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-S1-S5}, doi = {10.1186/1471-2105-16-S1-S5}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HuangHLW15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuangLTC15, author = {Kai{-}Yao Huang and Tzong{-}Yi Lee and Yu{-}Chuan Teng and Tzu{-}Hao Chang}, title = {ViralmiR: a support-vector-machine-based method for predicting viral microRNA precursors}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-1}}, pages = {S9}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-S1-S9}, doi = {10.1186/1471-2105-16-S1-S9}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HuangLTC15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiWHCTH15, author = {Yun{-}Lung Li and Jui{-}Cheng Weng and Chiung{-}Chih Hsiao and Min{-}Te Chou and Chin{-}Wen Tseng and Jui{-}Hung Hung}, title = {{PEAT:} an intelligent and efficient paired-end sequencing adapter trimming algorithm}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-1}}, pages = {S2}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-S1-S2}, doi = {10.1186/1471-2105-16-S1-S2}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LiWHCTH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LinLHH15, author = {Jau{-}Ji Lin and Zih{-}Lin Lin and Jenn{-}Kang Hwang and Tsun{-}Tsao Huang}, title = {On the packing density of the unbound protein-protein interaction interface and its implications in dynamics}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-1}}, pages = {S7}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-S1-S7}, doi = {10.1186/1471-2105-16-S1-S7}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LinLHH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MimoriNKSKYN15, author = {Takahiro Mimori and Naoki Nariai and Kaname Kojima and Yukuto Sato and Yosuke Kawai and Yumi Yamaguchi{-}Kabata and Masao Nagasaki}, title = {Estimating copy numbers of alleles from population-scale high-throughput sequencing data}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-1}}, pages = {S4}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-S1-S4}, doi = {10.1186/1471-2105-16-S1-S4}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MimoriNKSKYN15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/NguyenHHCBLWL15, author = {Van{-}Nui Nguyen and Kai{-}Yao Huang and Chien{-}Hsun Huang and Tzu{-}Hao Chang and Neil Arvin Breta{\~{n}}a and K. Robert Lai and Julia Weng and Tzong{-}Yi Lee}, title = {Characterization and identification of ubiquitin conjugation sites with {E3} ligase recognition specificities}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-1}}, pages = {S1}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-S1-S1}, doi = {10.1186/1471-2105-16-S1-S1}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/NguyenHHCBLWL15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SunYTL15, author = {Hong Sun and Shuang Yang and Liangliang Tun and Yixue Li}, title = {IAOseq: inferring abundance of overlapping genes using RNA-seq data}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-1}}, pages = {S3}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-S1-S3}, doi = {10.1186/1471-2105-16-S1-S3}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SunYTL15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/VasylenkoLCCHH15, author = {Tamara Vasylenko and Yi{-}Fan Liou and Hong{-}An Chen and Phasit Charoenkwan and Hui{-}Ling Huang and Shinn{-}Ying Ho}, title = {{SCMPSP:} Prediction and characterization of photosynthetic proteins based on a scoring card method}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-1}}, pages = {S8}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-S1-S8}, doi = {10.1186/1471-2105-16-S1-S8}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/VasylenkoLCCHH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WangZLS15, author = {Wenhui Wang and Xianghong Jasmine Zhou and Zhenqiu Liu and Fengzhu Sun}, title = {Network tuned multiple rank aggregation and applications to gene ranking}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-1}}, pages = {S6}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-S1-S6}, doi = {10.1186/1471-2105-16-S1-S6}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WangZLS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/BaiJW15, author = {Yang Bai and Shufan Ji and Yadong Wang}, title = {IRcall and IRclassifier: two methods for flexible detection of intron retention events from RNA-Seq data}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S9}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S9}, doi = {10.1186/1471-2164-16-S2-S9}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/BaiJW15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChienCWCHC15, author = {Chia{-}Hung Chien and Chi{-}Nga Chow and Nai{-}Yun Wu and Yi{-}Fan Chiang{-}Hsieh and Ping{-}Fu Hou and Wen{-}Chi Chang}, title = {EXPath: a database of comparative expression analysis inferring metabolic pathways for plants}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S6}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S6}, doi = {10.1186/1471-2164-16-S2-S6}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChienCWCHC15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/HsuHCSHT15, author = {Sheng{-}Da Hsu and Hsi{-}Yuan Huang and Chih{-}Hung Chou and Yi{-}Ming Sun and Ming{-}Ta Hsu and Ann{-}Ping Tsou}, title = {Integrated analyses to reconstruct microRNA-mediated regulatory networks in mouse liver using high-throughput profiling}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S12}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S12}, doi = {10.1186/1471-2164-16-S2-S12}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/HsuHCSHT15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/IchikawaM15, author = {Kazuki Ichikawa and Shinichi Morishita}, title = {A linear time algorithm for detecting long genomic regions enriched with a specific combination of epigenetic states}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S8}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S8}, doi = {10.1186/1471-2164-16-S2-S8}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/IchikawaM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/JiangWL15, author = {Rui Jiang and Mengmeng Wu and Lianshuo Li}, title = {Pinpointing disease genes through phenomic and genomic data fusion}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S3}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S3}, doi = {10.1186/1471-2164-16-S2-S3}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/JiangWL15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiX15, author = {Yi Li and Xiaohui Xie}, title = {MixClone: a mixture model for inferring tumor subclonal populations}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S1}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S1}, doi = {10.1186/1471-2164-16-S2-S1}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiX15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/NariaiKSMSKYYN15, author = {Naoki Nariai and Kaname Kojima and Sakae Saito and Takahiro Mimori and Yukuto Sato and Yosuke Kawai and Yumi Yamaguchi{-}Kabata and Jun Yasuda and Masao Nagasaki}, title = {HLA-VBSeq: accurate {HLA} typing at full resolution from whole-genome sequencing data}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S7}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S7}, doi = {10.1186/1471-2164-16-S2-S7}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/NariaiKSMSKYYN15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/NguyenHWNL15, author = {Thanh{-}Tung Nguyen and Joshua Zhexue Huang and Qingyao Wu and Thuy Thi Nguyen and Mark Junjie Li}, title = {Genome-wide association data classification and SNPs selection using two-stage quality-based Random Forests}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S5}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S5}, doi = {10.1186/1471-2164-16-S2-S5}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/NguyenHWNL15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/SongLLL15, author = {Renhua Song and Qian Liu and Tao Liu and Jinyan Li}, title = {Connecting rules from paired miRNA and mRNA expression data sets of {HCV} patients to detect both inverse and positive regulatory relationships}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S11}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S11}, doi = {10.1186/1471-2164-16-S2-S11}, timestamp = {Fri, 23 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/SongLLL15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/TasnimMYJ015, author = {Masruba Tasnim and Shining Ma and Ei{-}Wen Yang and Tao Jiang and Wei Li}, title = {Accurate inference of isoforms from multiple sample RNA-Seq data}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S15}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S15}, doi = {10.1186/1471-2164-16-S2-S15}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/TasnimMYJ015.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/TsengLCZCZL15, author = {Yu{-}Ting Tseng and Wenyuan Li and Ching{-}Hsien Chen and Shi{-}Hua Zhang and Jeremy J. W. Chen and Xianghong Jasmine Zhou and Chun{-}Chi Liu}, title = {{IIIDB:} a database for isoform-isoform interactions and isoform network modules}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S10}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S10}, doi = {10.1186/1471-2164-16-S2-S10}, timestamp = {Fri, 19 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/TsengLCZCZL15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/VatsDGGBG15, author = {Chakshu Vats and Jaspreet Kaur Dhanjal and Sukriti Goyal and Ankita Gupta and Navneeta Bharadvaja and Abhinav Grover}, title = {Mechanistic analysis elucidating the relationship between Lys96 mutation in Mycobacterium tuberculosis pyrazinamidase enzyme and pyrazinamide susceptibility}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S14}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S14}, doi = {10.1186/1471-2164-16-S2-S14}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/VatsDGGBG15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/WangSCLCTLCPC15, author = {Hsei{-}Wei Wang and Hsing{-}Jen Sun and Ting{-}Yu Chang and Hung{-}Hao Lo and Wei{-}Chung Cheng and George C. Tseng and Chin{-}Teng Lin and Shing{-}Jyh Chang and Nikhil R. Pal and I{-}Fang Chung}, title = {Discovering monotonic stemness marker genes from time-series stem cell microarray data}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S2}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S2}, doi = {10.1186/1471-2164-16-S2-S2}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/WangSCLCTLCPC15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/YasudaM15, author = {Tomohiro Yasuda and Satoru Miyano}, title = {Inferring the global structure of chromosomes from structural variations}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S13}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S13}, doi = {10.1186/1471-2164-16-S2-S13}, timestamp = {Mon, 15 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/YasudaM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ZhangLYW15, author = {Yijia Zhang and Hongfei Lin and Zhihao Yang and Jian Wang}, title = {Integrating experimental and literature protein-protein interaction data for protein complex prediction}, journal = {{BMC} Genom.}, volume = {16}, number = {{S-2}}, pages = {S4}, year = {2015}, url = {https://doi.org/10.1186/1471-2164-16-S2-S4}, doi = {10.1186/1471-2164-16-S2-S4}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhangLYW15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/HsiehTCTKHN15, author = {Wen{-}Tsong Hsieh and Ke{-}Rung Tzeng and Jin{-}Shuei Ciou and Jeffrey J. P. Tsai and Nilubon Kurubanjerdjit and Chien{-}Hung Huang and Ka{-}Lok Ng}, title = {Transcription factor and microRNA-regulated network motifs for cancer and signal transduction networks}, journal = {{BMC} Syst. Biol.}, volume = {9}, number = {{S-1}}, pages = {S5}, year = {2015}, url = {https://doi.org/10.1186/1752-0509-9-S1-S5}, doi = {10.1186/1752-0509-9-S1-S5}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/HsiehTCTKHN15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/JeongKWS15, author = {Hyun{-}hwan Jeong and So Kim and Kyubum Wee and Kyung{-}Ah Sohn}, title = {Investigating the utility of clinical outcome-guided mutual information network in network-based Cox regression}, journal = {{BMC} Syst. Biol.}, volume = {9}, number = {{S-1}}, pages = {S8}, year = {2015}, url = {https://doi.org/10.1186/1752-0509-9-S1-S8}, doi = {10.1186/1752-0509-9-S1-S8}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/JeongKWS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/JeongY15, author = {Hyundoo Jeong and Byung{-}Jun Yoon}, title = {Accurate multiple network alignment through context-sensitive random walk}, journal = {{BMC} Syst. Biol.}, volume = {9}, number = {{S-1}}, pages = {S7}, year = {2015}, url = {https://doi.org/10.1186/1752-0509-9-S1-S7}, doi = {10.1186/1752-0509-9-S1-S7}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/JeongY15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/MishraBCZZ15, author = {Shital K. Mishra and Sourav S. Bhowmick and Huey{-}Eng Chua and Fan Zhang and Jie Zheng}, title = {Computational cell fate modelling for discovery of rewiring in apoptotic network for enhanced cancer drug sensitivity}, journal = {{BMC} Syst. Biol.}, volume = {9}, number = {{S-1}}, pages = {S4}, year = {2015}, url = {https://doi.org/10.1186/1752-0509-9-S1-S4}, doi = {10.1186/1752-0509-9-S1-S4}, timestamp = {Wed, 30 Nov 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/MishraBCZZ15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/ShimodaSOIA15, author = {Takehiro Shimoda and Shuji Suzuki and Masahito Ohue and Takashi Ishida and Yutaka Akiyama}, title = {Protein-protein docking on hardware accelerators: comparison of {GPU} and {MIC} architectures}, journal = {{BMC} Syst. Biol.}, volume = {9}, number = {{S-1}}, pages = {S6}, year = {2015}, url = {https://doi.org/10.1186/1752-0509-9-S1-S6}, doi = {10.1186/1752-0509-9-S1-S6}, timestamp = {Mon, 21 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/ShimodaSOIA15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/WangLLDH15, author = {Caihua Wang and Juan Liu and Fei Luo and Zixing Deng and Qian{-}Nan Hu}, title = {Predicting target-ligand interactions using protein ligand-binding site and ligand substructures}, journal = {{BMC} Syst. Biol.}, volume = {9}, number = {{S-1}}, pages = {S2}, year = {2015}, url = {https://doi.org/10.1186/1752-0509-9-S1-S2}, doi = {10.1186/1752-0509-9-S1-S2}, timestamp = {Tue, 21 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/WangLLDH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/WangYPLJMY15, author = {Likun Wang and Luhe Yang and Zuohan Peng and Dan Lu and Yan Jin and Michael McNutt and Yuxin Yin}, title = {cisPath: an R/Bioconductor package for cloud users for visualization and management of functional protein interaction networks}, journal = {{BMC} Syst. Biol.}, volume = {9}, number = {{S-1}}, pages = {S1}, year = {2015}, url = {https://doi.org/10.1186/1752-0509-9-S1-S1}, doi = {10.1186/1752-0509-9-S1-S1}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/WangYPLJMY15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/WuWLYLS15, author = {Qingyao Wu and Zhenyu Wang and Chunshan Li and Yunming Ye and Yueping Li and Ning Sun}, title = {Protein functional properties prediction in sparsely-label {PPI} networks through regularized non-negative matrix factorization}, journal = {{BMC} Syst. Biol.}, volume = {9}, number = {{S-1}}, pages = {S9}, year = {2015}, url = {https://doi.org/10.1186/1752-0509-9-S1-S9}, doi = {10.1186/1752-0509-9-S1-S9}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/WuWLYLS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/YuZDG15, author = {Guo{-}Xian Yu and Hailong Zhu and Carlotta Domeniconi and Maozu Guo}, title = {Integrating multiple networks for protein function prediction}, journal = {{BMC} Syst. Biol.}, volume = {9}, number = {{S-1}}, pages = {S3}, year = {2015}, url = {https://doi.org/10.1186/1752-0509-9-S1-S3}, doi = {10.1186/1752-0509-9-S1-S3}, timestamp = {Thu, 12 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/YuZDG15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AsarnowS14, author = {Daniel Asarnow and Rahul Singh}, title = {Automatic classification of protein structures using low-dimensional structure space mappings}, journal = {{BMC} Bioinform.}, volume = {15}, number = {{S-2}}, pages = {S1}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-S2-S1}, doi = {10.1186/1471-2105-15-S2-S1}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/AsarnowS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JaskowiakCC14, author = {Pablo A. Jaskowiak and Ricardo J. G. B. Campello and Ivan G. Costa}, title = {On the selection of appropriate distances for gene expression data clustering}, journal = {{BMC} Bioinform.}, volume = {15}, number = {{S-2}}, pages = {S2}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-S2-S2}, doi = {10.1186/1471-2105-15-S2-S2}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JaskowiakCC14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiuMLCZR14, author = {Wenting Liu and Kui Miao and Guangxia Li and Kuiyu Chang and Jie Zheng and Jagath C. Rajapakse}, title = {Extracting rate changes in transcriptional regulation from {MEDLINE} abstracts}, journal = {{BMC} Bioinform.}, volume = {15}, number = {{S-2}}, pages = {S4}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-S2-S4}, doi = {10.1186/1471-2105-15-S2-S4}, timestamp = {Thu, 13 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/LiuMLCZR14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiuXZXWC14, author = {Bin Liu and Jinghao Xu and Quan Zou and Ruifeng Xu and Xiaolong Wang and Qingcai Chen}, title = {Using distances between Top-n-gram and residue pairs for protein remote homology detection}, journal = {{BMC} Bioinform.}, volume = {15}, number = {{S-2}}, pages = {S3}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-S2-S3}, doi = {10.1186/1471-2105-15-S2-S3}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LiuXZXWC14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PengWC14, author = {Jiajie Peng and Yadong Wang and Jin Chen}, title = {Towards integrative gene functional similarity measurement}, journal = {{BMC} Bioinform.}, volume = {15}, number = {{S-2}}, pages = {S5}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-S2-S5}, doi = {10.1186/1471-2105-15-S2-S5}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/PengWC14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/RuanHMA14, author = {Peiying Ruan and Morihiro Hayashida and Osamu Maruyama and Tatsuya Akutsu}, title = {Prediction of heterotrimeric protein complexes by two-phase learning using neighboring kernels}, journal = {{BMC} Bioinform.}, volume = {15}, number = {{S-2}}, pages = {S6}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-S2-S6}, doi = {10.1186/1471-2105-15-S2-S6}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/RuanHMA14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ShawIRH14, author = {Dipan Lal Shaw and A. S. M. Shohidull Islam and M. Sohel Rahman and Masud Hasan}, title = {Protein folding in {HP} model on hexagonal lattices with diagonals}, journal = {{BMC} Bioinform.}, volume = {15}, number = {{S-2}}, pages = {S7}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-S2-S7}, doi = {10.1186/1471-2105-15-S2-S7}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ShawIRH14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WuYNHS14, author = {Qingyao Wu and Yunming Ye and Michael K. Ng and Shen{-}Shyang Ho and Ruichao Shi}, title = {Collective prediction of protein functions from protein-protein interaction networks}, journal = {{BMC} Bioinform.}, volume = {15}, number = {{S-2}}, pages = {S9}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-S2-S9}, doi = {10.1186/1471-2105-15-S2-S9}, timestamp = {Wed, 03 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/WuYNHS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhangWW14, author = {Denan Zhang and Guohua Wang and Yadong Wang}, title = {Transcriptional regulation prediction of antiestrogen resistance in breast cancer based on {RNA} polymerase {II} binding data}, journal = {{BMC} Bioinform.}, volume = {15}, number = {{S-2}}, pages = {S10}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-S2-S10}, doi = {10.1186/1471-2105-15-S2-S10}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhangWW14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChengCHHTWKC14, author = {Chia Yang Cheng and Chia{-}Han Chu and Hung{-}Wei Hsu and Fang{-}Rong Hsu and Chung Yi Tang and Wen{-}Ching Wang and Hsing{-}Jien Kung and Pei{-}Ching Chang}, title = {An improved ChIP-seq peak detection system for simultaneously identifying post-translational modified transcription factors by combinatorial fusion, using SUMOylation as an example}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S1}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S1}, doi = {10.1186/1471-2164-15-S1-S1}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChengCHHTWKC14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/DehzangiPLSS14, author = {Abdollah Dehzangi and Kuldip K. Paliwal and James G. Lyons and Alok Sharma and Abdul Sattar}, title = {Proposing a highly accurate protein structural class predictor using segmentation-based features}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S2}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S2}, doi = {10.1186/1471-2164-15-S1-S2}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/DehzangiPLSS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/DhanjalGSSG14, author = {Jaspreet Kaur Dhanjal and Sonam Grover and Sudhanshu Sharma and Ajeet Singh and Abhinav Grover}, title = {Structural insights into mode of actions of novel natural Mycobacterium protein tyrosine phosphatase {B} inhibitors}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S3}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S3}, doi = {10.1186/1471-2164-15-S1-S3}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/DhanjalGSSG14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/FolkmanSS14, author = {Lukas Folkman and Bela Stantic and Abdul Sattar}, title = {Towards sequence-based prediction of mutation-induced stability changes in unseen non-homologous proteins}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S4}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S4}, doi = {10.1186/1471-2164-15-S1-S4}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/FolkmanSS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/KunduB14, author = {Kousik Kundu and Rolf Backofen}, title = {Cluster based prediction of PDZ-peptide interactions}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S5}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S5}, doi = {10.1186/1471-2164-15-S1-S5}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/KunduB14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LaiZNMLM14, author = {Yinglei Lai and Fanni Zhang and Tapan K. Nayak and Reza Modarres and Norman H. Lee and Timothy A. McCaffrey}, title = {Concordant integrative gene set enrichment analysis of multiple large-scale two-sample expression data sets}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S6}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S6}, doi = {10.1186/1471-2164-15-S1-S6}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LaiZNMLM14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LeHHT14, author = {Ngoc Tu Le and Tu Bao Ho and Bich Hai Ho and Dang Tran}, title = {A nucleosomal approach to inferring causal relationships of histone modifications}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S7}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S7}, doi = {10.1186/1471-2164-15-S1-S7}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LeHHT14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiaoC14, author = {Ben{-}Yang Liao and Andrew Ying{-}Fei Chang}, title = {Accumulation of CTCF-binding sites drives expression divergence between tandemly duplicated genes in humans}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S8}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S8}, doi = {10.1186/1471-2164-15-S1-S8}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiaoC14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiuSLK14, author = {Xiaowen Liu and Matthew W. Segar and Shuai Cheng Li and Sangtae Kim}, title = {Spectral probabilities of top-down tandem mass spectra}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S9}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S9}, doi = {10.1186/1471-2164-15-S1-S9}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuSLK14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LuLHHQ14, author = {Meng Lu and Hye{-}Seung Lee and David Hadley and Jianhua Z. Huang and Xiaoning Qian}, title = {Supervised categorical principal component analysis for genome-wide association analyses}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S10}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S10}, doi = {10.1186/1471-2164-15-S1-S10}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LuLHHQ14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/WangZZXLDZZYWD14, author = {Fu{-}Qiang Wang and Jun Zhong and Ying Zhao and Jing{-}Fa Xiao and Jing Liu and Meng Dai and Guizhen Zheng and Li Zhang and Jun Yu and Jiayan Wu and Baoling Duan}, title = {Genome sequencing of high-penicillin producing industrial strain of Penicillium chrysogenum}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S11}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S11}, doi = {10.1186/1471-2164-15-S1-S11}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/WangZZXLDZZYWD14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/WanguYC14, author = {Yi Wang and Henry Chi{-}Ming Leung and Siu{-}Ming Yiu and Francis Y. L. Chin}, title = {MetaCluster-TA: taxonomic annotation for metagenomic data based on assembly-assisted binning}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S12}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S12}, doi = {10.1186/1471-2164-15-S1-S12}, timestamp = {Sun, 25 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/WanguYC14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/WeiLZLGHX14, author = {Lin Wei and Baofeng Lian and Yuannv Zhang and Wei Li and Jianren Gu and Xianghuo He and Lu Xie}, title = {Application of microRNA and mRNA expression profiling on prognostic biomarker discovery for hepatocellular carcinoma}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S13}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S13}, doi = {10.1186/1471-2164-15-S1-S13}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/WeiLZLGHX14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/Yoon14, author = {Byung{-}Jun Yoon}, title = {Sequence alignment by passing messages}, journal = {{BMC} Genom.}, volume = {15}, number = {{S-1}}, pages = {S14}, year = {2014}, url = {https://doi.org/10.1186/1471-2164-15-S1-S14}, doi = {10.1186/1471-2164-15-S1-S14}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/Yoon14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/AwadC14, author = {Sherine Awad and Jin Chen}, title = {Inferring transcription factor collaborations in gene regulatory networks}, journal = {{BMC} Syst. Biol.}, volume = {8}, number = {{S-1}}, pages = {S1}, year = {2014}, url = {https://doi.org/10.1186/1752-0509-8-S1-S1}, doi = {10.1186/1752-0509-8-S1-S1}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/AwadC14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/ChenJZJ14, author = {Yong Chen and Thibault Jacquemin and Shuyan Zhang and Rui Jiang}, title = {Prioritizing protein complexes implicated in human diseases by network optimization}, journal = {{BMC} Syst. Biol.}, volume = {8}, number = {{S-1}}, pages = {S2}, year = {2014}, url = {https://doi.org/10.1186/1752-0509-8-S1-S2}, doi = {10.1186/1752-0509-8-S1-S2}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/ChenJZJ14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/GongWC14, author = {Haijun Gong and Tong Tong Wu and Edmund M. Clarke}, title = {Pathway-gene identification for pancreatic cancer survival via doubly regularized Cox regression}, journal = {{BMC} Syst. Biol.}, volume = {8}, number = {{S-1}}, pages = {S3}, year = {2014}, url = {https://doi.org/10.1186/1752-0509-8-S1-S3}, doi = {10.1186/1752-0509-8-S1-S3}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/GongWC14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/KinoshitaIUT14, author = {Ryoichi Kinoshita and Mitsuo Iwadate and Hideaki Umeyama and Y{-}h. Taguchi}, title = {Genes associated with genotype-specific {DNA} methylation in squamous cell carcinoma as candidate drug targets}, journal = {{BMC} Syst. Biol.}, volume = {8}, number = {{S-1}}, pages = {S4}, year = {2014}, url = {https://doi.org/10.1186/1752-0509-8-S1-S4}, doi = {10.1186/1752-0509-8-S1-S4}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/KinoshitaIUT14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/LiuWLWZSWQZ14, author = {Hui Liu and Tongtong Wang and Hongbo Liu and Yanjun Wei and Guofeng Zhao and Jianzhong Su and Qiong Wu and Hong Qiao and Yan Zhang}, title = {Detection of type 2 diabetes related modules and genes based on epigenetic networks}, journal = {{BMC} Syst. Biol.}, volume = {8}, number = {{S-1}}, pages = {S5}, year = {2014}, url = {https://doi.org/10.1186/1752-0509-8-S1-S5}, doi = {10.1186/1752-0509-8-S1-S5}, timestamp = {Thu, 15 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/LiuWLWZSWQZ14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/QianBMS14, author = {Yu Qian and S{\o}ren Besenbacher and Thomas Mailund and Mikkel Heide Schierup}, title = {Identifying disease associated genes by network propagation}, journal = {{BMC} Syst. Biol.}, volume = {8}, number = {{S-1}}, pages = {S6}, year = {2014}, url = {https://doi.org/10.1186/1752-0509-8-S1-S6}, doi = {10.1186/1752-0509-8-S1-S6}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/QianBMS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/QiuTCA14, author = {Yushan Qiu and Takeyuki Tamura and Wai{-}Ki Ching and Tatsuya Akutsu}, title = {On control of singleton attractors in multiple Boolean networks: integer programming-based method}, journal = {{BMC} Syst. Biol.}, volume = {8}, number = {{S-1}}, pages = {S7}, year = {2014}, url = {https://doi.org/10.1186/1752-0509-8-S1-S7}, doi = {10.1186/1752-0509-8-S1-S7}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/QiuTCA14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/TianS14, author = {Tianhai Tian and Kate Smith{-}Miles}, title = {Mathematical modeling of GATA-switching for regulating the differentiation of hematopoietic stem cell}, journal = {{BMC} Syst. Biol.}, volume = {8}, number = {{S-1}}, pages = {S8}, year = {2014}, url = {https://doi.org/10.1186/1752-0509-8-S1-S8}, doi = {10.1186/1752-0509-8-S1-S8}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/TianS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/WangQ14, author = {Yijie Wang and Xiaoning Qian}, title = {Joint clustering of protein interaction networks through Markov random walk}, journal = {{BMC} Syst. Biol.}, volume = {8}, number = {{S-1}}, pages = {S9}, year = {2014}, url = {https://doi.org/10.1186/1752-0509-8-S1-S9}, doi = {10.1186/1752-0509-8-S1-S9}, timestamp = {Mon, 01 Mar 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/WangQ14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/XiZWW14, author = {Yanping Xi and Yue Zhao and Li Wang and Fei Wang}, title = {Comparison on extreme pathways reveals nature of different biological processes}, journal = {{BMC} Syst. Biol.}, volume = {8}, number = {{S-1}}, pages = {S10}, year = {2014}, url = {https://doi.org/10.1186/1752-0509-8-S1-S10}, doi = {10.1186/1752-0509-8-S1-S10}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/XiZWW14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AchawanantakunS13, author = {Rujira Achawanantakun and Yanni Sun}, title = {Shape and secondary structure prediction for ncRNAs including pseudoknots based on linear {SVM}}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S1}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S1}, doi = {10.1186/1471-2105-14-S2-S1}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/AchawanantakunS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AmarasingheLH13, author = {Kaushalya C. Amarasinghe and Jason Li and Saman K. Halgamuge}, title = {CoNVEX: copy number variation estimation in exome sequencing data using {HMM}}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S2}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S2}, doi = {10.1186/1471-2105-14-S2-S2}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/AmarasingheLH13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AmarasingheLH13a, author = {Kaushalya C. Amarasinghe and Jason Li and Saman K. Halgamuge}, title = {Correction: CoNVEX: copy number variation estimation in exome sequencing data using {HMM}}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S26}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S26}, doi = {10.1186/1471-2105-14-S2-S26}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/AmarasingheLH13a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/CarlTH13, author = {Joseph W. Carl and Joanne Trgovcich and Sridhar Hannenhalli}, title = {Widespread evidence of viral miRNAs targeting host pathways}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S3}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S3}, doi = {10.1186/1471-2105-14-S2-S3}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/CarlTH13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChangHHWHH13, author = {Tzu{-}Hao Chang and Hsi{-}Yuan Huang and Justin Bo{-}Kai Hsu and Shun{-}Long Weng and Jorng{-}Tzong Horng and Hsien{-}Da Huang}, title = {An enhanced computational platform for investigating the roles of regulatory {RNA} and for identifying functional {RNA} motifs}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S4}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S4}, doi = {10.1186/1471-2105-14-S2-S4}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChangHHWHH13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenLC13, author = {Chi{-}Wei Chen and Jerome Lin and Yen{-}Wei Chu}, title = {iStable: off-the-shelf predictor integration for predicting protein stability changes}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S5}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S5}, doi = {10.1186/1471-2105-14-S2-S5}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenLC13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/FolkmanSS13, author = {Lukas Folkman and Bela Stantic and Abdul Sattar}, title = {Sequence-only evolutionary and predicted structural features for the prediction of stability changes in protein mutants}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S6}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S6}, doi = {10.1186/1471-2105-14-S2-S6}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/FolkmanSS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GaireSHBSH13, author = {Raj K. Gaire and Lorey Smith and Patrick Humbert and James Bailey and Peter J. Stuckey and Izhak Haviv}, title = {Discovery and analysis of consistent active sub-networks in cancers}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S7}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S7}, doi = {10.1186/1471-2105-14-S2-S7}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/GaireSHBSH13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GuCMPCG13, author = {Chen Gu and Huang{-}Wei Chang and Lutz Maibaum and Vijay S. Pande and Gunnar E. Carlsson and Leonidas J. Guibas}, title = {Building Markov state models with solvent dynamics}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S8}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S8}, doi = {10.1186/1471-2105-14-S2-S8}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/GuCMPCG13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HoGD13, author = {Eric S. Ho and Samuel I. Gunderson and Siobain Duffy}, title = {A multispecies polyadenylation site model}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S9}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S9}, doi = {10.1186/1471-2105-14-S2-S9}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HoGD13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LinCLY13, author = {Chun{-}Yu Lin and Yung{-}Chiang Chen and Yu{-}Shu Lo and Jinn{-}Moon Yang}, title = {Inferring homologous protein-protein interactions through pair position specific scoring matrix}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S11}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S11}, doi = {10.1186/1471-2105-14-S2-S11}, timestamp = {Thu, 05 May 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/LinCLY13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LinCS13, author = {Scott Lin and Cheng{-}Wei Cheng and Emily Chia{-}Yu Su}, title = {Prediction of B-cell epitopes using evolutionary information and propensity scales}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S10}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S10}, doi = {10.1186/1471-2105-14-S2-S10}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LinCS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MaLLTBL13, author = {Cheng{-}Yu Ma and Shu{-}Hsi Lin and Chi{-}Ching Lee and Chuan Yi Tang and Bonnie Berger and Chung{-}Shou Liao}, title = {Reconstruction of phyletic trees by global alignment of multiple metabolic networks}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S12}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S12}, doi = {10.1186/1471-2105-14-S2-S12}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MaLLTBL13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MeydanOS13, author = {Cem Meydan and Hasan H. Otu and Osman Ugur Sezerman}, title = {Prediction of peptides binding to {MHC} class {I} and {II} alleles by temporal motif mining}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S13}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S13}, doi = {10.1186/1471-2105-14-S2-S13}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/MeydanOS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PengCW13, author = {Jiajie Peng and Jin Chen and Yadong Wang}, title = {Identifying cross-category relations in gene ontology and constructing genome-specific term association networks}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S15}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S15}, doi = {10.1186/1471-2105-14-S2-S15}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/PengCW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/RashidNHSPS13, author = {Mahmood A. Rashid and M. A. Hakim Newton and Tamjidul Hoque and Swakkhar Shatabda and Duc Nghia Pham and Abdul Sattar}, title = {Spiral search: a hydrophobic-core directed local search for simplified {PSP} on 3D {FCC} lattice}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S16}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S16}, doi = {10.1186/1471-2105-14-S2-S16}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/RashidNHSPS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/RenZQ13, author = {Shaogang Ren and Bo Zeng and Xiaoning Qian}, title = {Adaptive bi-level programming for optimal gene knockouts for targeted overproduction under phenotypic constraints}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S17}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S17}, doi = {10.1186/1471-2105-14-S2-S17}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/RenZQ13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SandBFPM13, author = {Andreas Sand and Gerth St{\o}lting Brodal and Rolf Fagerberg and Christian N. S. Pedersen and Thomas Mailund}, title = {A practical O(n log\({}^{\mbox{2 }}\) n) time algorithm for computing the triplet distance on binary trees}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S18}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S18}, doi = {10.1186/1471-2105-14-S2-S18}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SandBFPM13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ShatabdaNRPS13, author = {Swakkhar Shatabda and M. A. Hakim Newton and Mahmood A. Rashid and Duc Nghia Pham and Abdul Sattar}, title = {The road not taken: retreat and diverge in local search for simplified protein structure prediction}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S19}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S19}, doi = {10.1186/1471-2105-14-S2-S19}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ShatabdaNRPS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SinghM13, author = {Rahul Singh and William Murad}, title = {Protein disulfide topology determination through the fusion of mass spectrometric analysis and sequence-based prediction using Dempster-Shafer theory}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S20}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S20}, doi = {10.1186/1471-2105-14-S2-S20}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SinghM13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SuSK13, author = {Chinh T. T. Su and Christian Sch{\"{o}}nbach and Chee Keong Kwoh}, title = {Molecular docking analysis of 2009-H1N1 and 2004-H5N1 influenza virus HLA-B*4405-restricted {HA} epitope candidates: implications for {TCR} cross-recognition and vaccine development}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S21}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S21}, doi = {10.1186/1471-2105-14-S2-S21}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/SuSK13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SukosdKANKP13, author = {Zsuzsanna S{\"{u}}k{\"{o}}sd and Bjarne Knudsen and James W. J. Anderson and {\'{A}}d{\'{a}}m Nov{\'{a}}k and J{\o}rgen Kjems and Christian N. S. Pedersen}, title = {Characterising {RNA} secondary structure space using information entropy}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S22}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S22}, doi = {10.1186/1471-2105-14-S2-S22}, timestamp = {Fri, 27 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SukosdKANKP13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/VinhCCGW13, author = {Xuan Vinh Nguyen and Madhu Chetty and Ross L. Coppel and Sandeep Gaudana and Pramod P. Wangikar}, title = {A model of the circadian clock in the cyanobacterium Cyanothece sp. {ATCC} 51142}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S14}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S14}, doi = {10.1186/1471-2105-14-S2-S14}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/VinhCCGW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WangQ13, author = {Yijie Wang and Xiaoning Qian}, title = {A novel subgradient-based optimization algorithm for blockmodel functional module identification}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S23}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S23}, doi = {10.1186/1471-2105-14-S2-S23}, timestamp = {Mon, 01 Mar 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WangQ13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WangW13, author = {Penghao Wang and Susan R. Wilson}, title = {Mass spectrometry-based protein identification by integrating de novo sequencing with database searching}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S24}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S24}, doi = {10.1186/1471-2105-14-S2-S24}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/WangW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YuanS13, author = {Cheng Yuan and Yanni Sun}, title = {Efficient known ncRNA search including pseudoknots}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-2}}, pages = {S25}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S2-S25}, doi = {10.1186/1471-2105-14-S2-S25}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/YuanS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChenS13, author = {Quan Chen and Fengzhu Sun}, title = {A unified approach for allele frequency estimation, {SNP} detection and association studies based on pooled sequencing data using {EM} algorithms}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S1}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S1}, doi = {10.1186/1471-2164-14-S1-S1}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChenS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChouLCHCWSHHH13, author = {Chih{-}Hung Chou and Feng{-}Mao Lin and Min{-}Te Chou and Sheng{-}Da Hsu and Tzu{-}Hao Chang and Shun{-}Long Weng and Sirjana Shrestha and Chiung{-}Chih Hsiao and Jui{-}Hung Hung and Hsien{-}Da Huang}, title = {A computational approach for identifying microRNA-target interactions using high-throughput {CLIP} and {PAR-CLIP} sequencing}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S2}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S2}, doi = {10.1186/1471-2164-14-S1-S2}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChouLCHCWSHHH13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/DurnoHKH13, author = {W. Evan Durno and Niels W. Hanson and Kishori M. Konwar and Steven J. Hallam}, title = {Expanding the boundaries of local similarity analysis}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S3}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S3}, doi = {10.1186/1471-2164-14-S1-S3}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/DurnoHKH13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/GaoZR13, author = {Zhen Gao and Ruizhe Zhao and Jianhua Ruan}, title = {A genome-wide cis-regulatory element discovery method based on promoter sequences and gene co-expression networks}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S4}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S4}, doi = {10.1186/1471-2164-14-S1-S4}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/GaoZR13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/JoshiVWLXN13, author = {Trupti Joshi and Babu Valliyodan and Jeng{-}Hung Wu and Suk{-}Ha Lee and Dong Xu and Henry T. Nguyen}, title = {Genomic differences between cultivated soybean, G. max and its wild relative G. soja}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S5}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S5}, doi = {10.1186/1471-2164-14-S1-S5}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/JoshiVWLXN13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LeeHCKWK13, author = {Minho Lee and Sangjo Han and Hyeshik Chang and Youn{-}Sig Kwak and David M. Weller and Dongsup Kim}, title = {FitSearch: a robust way to interpret a yeast fitness profile in terms of drug's mode-of-action}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S6}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S6}, doi = {10.1186/1471-2164-14-S1-S6}, timestamp = {Thu, 05 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LeeHCKWK13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/NikolenkoKA13, author = {Sergey I. Nikolenko and Anton I. Korobeynikov and Max A. Alekseyev}, title = {BayesHammer: Bayesian clustering for error correction in single-cell sequencing}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S7}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S7}, doi = {10.1186/1471-2164-14-S1-S7}, timestamp = {Wed, 04 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/NikolenkoKA13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ParrishSE13, author = {Nathaniel Parrish and Benjamin Sudakov and Eleazar Eskin}, title = {Genome reassembly with high-throughput sequencing data}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S8}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S8}, doi = {10.1186/1471-2164-14-S1-S8}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ParrishSE13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/PatrickBLY13, author = {Ellis Patrick and Michael J. Buckley and David M. Lin and Yee Hwa Yang}, title = {Improved moderation for gene-wise variance estimation in RNA-Seq via the exploitation of external information}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S9}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S9}, doi = {10.1186/1471-2164-14-S1-S9}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/PatrickBLY13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/UtroPP13, author = {Filippo Utro and Marc Pybus and Laxmi Parida}, title = {Sum of parts is greater than the whole: inference of common genetic history of populations}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S10}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S10}, doi = {10.1186/1471-2164-14-S1-S10}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/UtroPP13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/WangZCYZ13, author = {Jiayin Wang and Zhongmeng Zhao and Zhi Cao and Aiyuan Yang and Jin Zhang}, title = {A probabilistic method for identifying rare variants underlying complex traits}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S11}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S11}, doi = {10.1186/1471-2164-14-S1-S11}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/WangZCYZ13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/Wittler13, author = {Roland Wittler}, title = {Unraveling overlapping deletions by agglomerative clustering}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S12}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S12}, doi = {10.1186/1471-2164-14-S1-S12}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/Wittler13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/Wittler13a, author = {Roland Wittler}, title = {Correction: Unraveling overlapping deletions by agglomerative clustering}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S16}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S16}, doi = {10.1186/1471-2164-14-S1-S16}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/Wittler13a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/XinLHYMA13, author = {Hongyi Xin and Donghyuk Lee and Farhad Hormozdiari and Samihan Yedkar and Onur Mutlu and Can Alkan}, title = {Accelerating read mapping with FastHASH}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S13}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S13}, doi = {10.1186/1471-2164-14-S1-S13}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/XinLHYMA13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ZareHGB13, author = {Habil Zare and Gholamreza Haffari and Arvind Gupta and Ryan Remy Brinkman}, title = {Scoring relevancy of features based on combinatorial analysis of Lasso with application to lymphoma diagnosis}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S14}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S14}, doi = {10.1186/1471-2164-14-S1-S14}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ZareHGB13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ZengH13, author = {Jia Zeng and Sridhar Hannenhalli}, title = {Inferring evolution of gene duplicates using probabilistic models and nonparametric belief propagation}, journal = {{BMC} Genom.}, volume = {14}, number = {{S-1}}, pages = {S15}, year = {2013}, url = {https://doi.org/10.1186/1471-2164-14-S1-S15}, doi = {10.1186/1471-2164-14-S1-S15}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ZengH13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChangWF12, author = {Darby Tien{-}Hao Chang and Chi{-}Yeh Wu and Chen{-}Yu Fan}, title = {A study on promoter characteristics of head-to-head genes in Saccharomyces cerevisiae}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S11}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S11}, doi = {10.1186/1471-2164-13-S1-S11}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChangWF12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ChenB12, author = {Yi{-}Ping Phoebe Chen and Peer Bork}, title = {The Tenth Asia Pacific Bioinformatics Conference {(APBC} 2012)}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {I1}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-I1}, doi = {10.1186/1471-2164-13-S1-I1}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ChenB12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/FuL12, author = {Gloria C.{-}L. Fu and Wen{-}Chang Lin}, title = {Identification of gene-oriented exon orthology between human and mouse}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S10}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S10}, doi = {10.1186/1471-2164-13-S1-S10}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/FuL12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/JoshiPFLYCWLBVWCSNX12, author = {Trupti Joshi and Kapil Patil and Michael R. Fitzpatrick and D. Franklin Levi and Qiuming Yao and Jeffrey R. Cook and Zheng Wang and Marc Libault and Laurent Brechenmacher and Babu Valliyodan and Xiaolei Wu and Jianlin Cheng and Gary Stacey and Henry T. Nguyen and Dong Xu}, title = {Soybean Knowledge Base (SoyKB): a web resource for soybean translational genomics}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S15}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S15}, doi = {10.1186/1471-2164-13-S1-S15}, timestamp = {Mon, 15 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/JoshiPFLYCWLBVWCSNX12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/KojimaIYFYGM12, author = {Kaname Kojima and Seiya Imoto and Rui Yamaguchi and Andr{\'{e}} Fujita and Mai Yamauchi and Noriko Gotoh and Satoru Miyano}, title = {Identifying regulational alterations in gene regulatory networks by state space representation of vector autoregressive models and variational annealing}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S6}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S6}, doi = {10.1186/1471-2164-13-S1-S6}, timestamp = {Mon, 15 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/KojimaIYFYGM12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LeeCHCS12, author = {Tzong{-}Yi Lee and Wen{-}Chi Chang and Justin Bo{-}Kai Hsu and Tzu{-}Hao Chang and Dray{-}Ming Shien}, title = {GPMiner: an integrated system for mining combinatorial cis-regulatory elements in mammalian gene group}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S3}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S3}, doi = {10.1186/1471-2164-13-S1-S3}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LeeCHCS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LeeMSSACACS12, author = {Hyokyeong Lee and Asher Moody{-}Davis and Utsab Saha and Brian M. Suzuki and Daniel Asarnow and Steven Chen and Michelle Arkin and Conor R. Caffrey and Rahul Singh}, title = {Quantification and clustering of phenotypic screening data using time-series analysis for chemotherapy of schistosomiasis}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S4}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S4}, doi = {10.1186/1471-2164-13-S1-S4}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LeeMSSACACS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LeiDWXLMZ12, author = {Guo{-}Qing Lei and Yong Dou and Wen Wan and Fei Xia and Rongchun Li and Meng Ma and Dan Zou}, title = {{CPU-GPU} hybrid accelerating the Zuker algorithm for {RNA} secondary structure prediction applications}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S14}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S14}, doi = {10.1186/1471-2164-13-S1-S14}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LeiDWXLMZ12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/LiLHTLL12, author = {Sung{-}Chou Li and Yu{-}Lun Liao and Meng{-}Ru Ho and Kuo{-}Wang Tsai and Chun{-}Hung Lai and Wen{-}Chang Lin}, title = {miRNA arm selection and isomiR distribution in gastric cancer}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S13}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S13}, doi = {10.1186/1471-2164-13-S1-S13}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/LiLHTLL12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/MysickovaV12, author = {Alena Mysickov{\'{a}} and Martin Vingron}, title = {Detection of interacting transcription factors in human tissues using predicted {DNA} binding affinity}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S2}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S2}, doi = {10.1186/1471-2164-13-S1-S2}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/MysickovaV12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/OsmanbeyogluHOL12, author = {Hatice U. Osmanbeyoglu and Ryan J. Hartmaier and Steffi Oesterreich and Xinghua Lu}, title = {Improving ChIP-seq peak-calling for functional co-regulator binding by integrating multiple sources of biological information}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S1}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S1}, doi = {10.1186/1471-2164-13-S1-S1}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/OsmanbeyogluHOL12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/RazavianKL12, author = {Narges Razavian and Hetunandan Kamisetty and Christopher James Langmead}, title = {Learning generative models of molecular dynamics}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S5}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S5}, doi = {10.1186/1471-2164-13-S1-S5}, timestamp = {Wed, 19 May 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/RazavianKL12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/SankoffZW12, author = {David Sankoff and Chunfang Zheng and Baoyong Wang}, title = {A model for biased fractionation after whole genome duplication}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S8}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S8}, doi = {10.1186/1471-2164-13-S1-S8}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/SankoffZW12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/WangLCLYCL12, author = {Nai{-}Jyuan Wang and Chi{-}Ching Lee and Chao{-}Sheng Cheng and Wei{-}Cheng Lo and Ya{-}Fen Yang and Ming{-}Nan Chen and Ping{-}Chiang Lyu}, title = {Construction and analysis of a plant non-specific lipid transfer protein database (nsLTPDB)}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S9}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S9}, doi = {10.1186/1471-2164-13-S1-S9}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcgenomics/WangLCLYCL12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/WatanabeSTM12, author = {Yukito Watanabe and Shigeto Seno and Yoichi Takenaka and Hideo Matsuda}, title = {An estimation method for inference of gene regulatory net-work using Bayesian network with uniting of partial problems}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S12}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S12}, doi = {10.1186/1471-2164-13-S1-S12}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/WatanabeSTM12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcgenomics/ZhangHT12, author = {Yiwei Zhang and Fei Hu and Jijun Tang}, title = {A mixture framework for inferring ancestral gene orders}, journal = {{BMC} Genom.}, volume = {13}, number = {{S-1}}, pages = {S7}, year = {2012}, url = {https://doi.org/10.1186/1471-2164-13-S1-S7}, doi = {10.1186/1471-2164-13-S1-S7}, timestamp = {Mon, 11 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhangHT12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/0002BFE11, author = {Wen{-}Chieh Chang and J. Gordon Burleigh and David Fern{\'{a}}ndez{-}Baca and Oliver Eulenstein}, title = {An {ILP} solution for the gene duplication problem}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S14}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S14}, doi = {10.1186/1471-2105-12-S1-S14}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/0002BFE11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BoucherM11, author = {Christina Boucher and Bin Ma}, title = {Closest string with outliers}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S55}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S55}, doi = {10.1186/1471-2105-12-S1-S55}, timestamp = {Mon, 10 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/BoucherM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChangLA11, author = {Che{-}Wei Chang and Ping{-}Chiang Lyu and Masanori Arita}, title = {Reconstructing phylogeny from metabolic substrate-product relationships}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S27}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S27}, doi = {10.1186/1471-2105-12-S1-S27}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChangLA11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenC11, author = {Yi{-}Ping Chen and Kwang{-}Hyun Cho}, title = {The Ninth Asia Pacific Bioinformatics Conference {(APBC2011)}}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {I1}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-I1}, doi = {10.1186/1471-2105-12-S1-I1}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenC11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenCFJH11, author = {Cho{-}Yi Chen and Shui{-}Tein Chen and Chiou{-}Shann Fuh and Hsueh{-}Fen Juan and Hsuan{-}Cheng Huang}, title = {Coregulation of transcription factors and microRNAs in human transcriptional regulatory network}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S41}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S41}, doi = {10.1186/1471-2105-12-S1-S41}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenCFJH11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenMLX11, author = {Yong Chen and Fenglou Mao and Guojun Li and Ying Xu}, title = {Genome-wide discovery of missing genes in biological pathways of prokaryotes}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S1}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S1}, doi = {10.1186/1471-2105-12-S1-S1}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenMLX11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChikalovYML11, author = {Igor Chikalov and Peggy Yao and Mikhail Moshkov and Jean{-}Claude Latombe}, title = {Learning probabilistic models of hydrogen bond stability from molecular dynamics simulation trajectories}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S34}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S34}, doi = {10.1186/1471-2105-12-S1-S34}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChikalovYML11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/CostaRRC11, author = {Ivan G. Costa and Helge G. Roider and Tha{\'{\i}}s Gaudencio do R{\^{e}}go and Francisco de A. T. de Carvalho}, title = {Predicting gene expression in {T} cell differentiation from histone modifications and transcription factor binding affinities by linear mixture models}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S29}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S29}, doi = {10.1186/1471-2105-12-S1-S29}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/CostaRRC11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/DuitamaKDHWM11, author = {Jorge Duitama and Justin Kennedy and Sanjiv Dinakar and Y{\"{o}}zen Hern{\'{a}}ndez and Yufeng Wu and Ion I. Mandoiu}, title = {Linkage disequilibrium based genotype calling from low-coverage shotgun sequencing reads}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S53}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S53}, doi = {10.1186/1471-2105-12-S1-S53}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/DuitamaKDHWM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/FukagawaTTTA11, author = {Daiji Fukagawa and Takeyuki Tamura and Atsuhiro Takasu and Etsuji Tomita and Tatsuya Akutsu}, title = {A clique-based method for the edit distance between unordered trees and its application to analysis of glycan structures}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S13}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S13}, doi = {10.1186/1471-2105-12-S1-S13}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/FukagawaTTTA11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GoreckiBE11, author = {Pawel G{\'{o}}recki and J. Gordon Burleigh and Oliver Eulenstein}, title = {Maximum likelihood models and algorithms for gene tree evolution with duplications and losses}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S15}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S15}, doi = {10.1186/1471-2105-12-S1-S15}, timestamp = {Fri, 17 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/GoreckiBE11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GroverSAPBBS11, author = {Abhinav Grover and Ashutosh Shandilya and Vibhuti Agrawal and Piyush Pratik and Divya Bhasme and Virendra S. Bisaria and Durai Sundar}, title = {Hsp90/Cdc37 Chaperone/co-chaperone complex, a novel junction anticancer target elucidated by the mode of action of herbal drug Withaferin {A}}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S30}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S30}, doi = {10.1186/1471-2105-12-S1-S30}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/GroverSAPBBS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HanL11, author = {Henry Han and Xiaoli Li}, title = {Multi-resolution independent component analysis for high-performance tumor classification and biomarker discovery}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S7}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S7}, doi = {10.1186/1471-2105-12-S1-S7}, timestamp = {Tue, 29 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HanL11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HeYGLY11, author = {Zengyou He and Can Yang and Guangyu Guo and Ning Li and Weichuan Yu}, title = {Motif-All: discovering all phosphorylation motifs}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S22}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S22}, doi = {10.1186/1471-2105-12-S1-S22}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/HeYGLY11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HeZY11, author = {Zengyou He and Hongyu Zhao and Weichuan Yu}, title = {Score regularization for peptide identification}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S2}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S2}, doi = {10.1186/1471-2105-12-S1-S2}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/HeZY11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HsuCLY11, author = {Kai{-}Cheng Hsu and Yen{-}Fu Chen and Shen{-}Rong Lin and Jinn{-}Moon Yang}, title = {iGEMDOCK: a graphical environment of enhancing {GEMDOCK} using pharmacological interactions and post-screening analysis}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S33}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S33}, doi = {10.1186/1471-2105-12-S1-S33}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/HsuCLY11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuangLLTHHHH11, author = {Hui{-}Ling Huang and I{-}Che Lin and Yi{-}Fan Liou and Chia{-}Ta Tsai and Kai{-}Ti Hsu and Wen{-}Lin Huang and Shinn{-}Jang Ho and Shinn{-}Ying Ho}, title = {Predicting and analyzing DNA-binding domains using a systematic approach to identifying a set of informative physicochemical and biochemical properties}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S47}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S47}, doi = {10.1186/1471-2105-12-S1-S47}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HuangLLTHHHH11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuangY11, author = {Jhang{-}Wei Huang and Jinn{-}Moon Yang}, title = {Changed epitopes drive the antigenic drift for influenza {A} {(H3N2)} viruses}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S31}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S31}, doi = {10.1186/1471-2105-12-S1-S31}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HuangY11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JeongNUM11, author = {Euna Jeong and Masao Nagasaki and Kazuko Ueno and Satoru Miyano}, title = {Ontology-based instance data validation for high-quality curated biological pathways}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S8}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S8}, doi = {10.1186/1471-2105-12-S1-S8}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JeongNUM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JohnTSL11, author = {Shalini John and Sundarapandian Thangapandian and Sugunadevi Sakkiah and Keun Woo Lee}, title = {Potent bace-1 inhibitor design using pharmacophore modeling, in silico screening and molecular docking studies}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S28}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S28}, doi = {10.1186/1471-2105-12-S1-S28}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JohnTSL11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KangCTCTPW11, author = {Chu Kang and Yung{-}Jen Chuang and Kai Che Tung and Chun Chao and Chuan Yi Tang and Shih Chi Peng and David Shan{-}Hill Wong}, title = {A genetic algorithm-based boolean delay model of intracellular signal transduction in inflammation}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S17}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S17}, doi = {10.1186/1471-2105-12-S1-S17}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KangCTCTPW11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KatoN11, author = {Tsuyoshi Kato and Nozomi Nagano}, title = {Discriminative structural approaches for enzyme active-site prediction}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S49}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S49}, doi = {10.1186/1471-2105-12-S1-S49}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KatoN11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KyogokuFOO11, author = {Riku Kyogoku and Ryo Fujimoto and Tomonobu Ozaki and Takenao Ohkawa}, title = {A method for supporting retrieval of articles on protein structure analysis considering users' intention}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S42}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S42}, doi = {10.1186/1471-2105-12-S1-S42}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KyogokuFOO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LeeW11, author = {Nung Kion Lee and Dianhui Wang}, title = {{SOMEA:} self-organizing map based extraction algorithm for {DNA} motif identification with heterogeneous model}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S16}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S16}, doi = {10.1186/1471-2105-12-S1-S16}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LeeW11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiCLTHJCCL11, author = {Sung{-}Chou Li and Wen{-}Ching Chan and Chun{-}Hung Lai and Kuo{-}Wang Tsai and Chun{-}Nan Hsu and Yuh{-}Shan Jou and Hua{-}Chien Chen and Chun{-}Hong Chen and Wen{-}Chang Lin}, title = {{UMARS:} Un-MAppable Reads Solution}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S9}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S9}, doi = {10.1186/1471-2105-12-S1-S9}, timestamp = {Mon, 23 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/LiCLTHJCCL11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiuLUZGSZDY11, author = {Sanmin Liu and Lantao Liu and Ugur Uzuner and Xin Zhou and Manxi Gu and Weibing Shi and Yixiang Zhang and Susie Y. Dai and Joshua S. Yuan}, title = {HDX-Analyzer: a novel package for statistical analysis of protein structure dynamics}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S43}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S43}, doi = {10.1186/1471-2105-12-S1-S43}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/LiuLUZGSZDY11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LoBBB11, author = {Christine Lo and Ali Bashir and Vikas Bansal and Vineet Bafna}, title = {Strobe sequence design for haplotype assembly}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S24}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S24}, doi = {10.1186/1471-2105-12-S1-S24}, timestamp = {Fri, 09 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LoBBB11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MitraRRUGMWH11, author = {Suparna Mitra and Paul Rupek and Daniel C. Richter and Tim Urich and Jack A. Gilbert and Folker Meyer and Andreas Wilke and Daniel H. Huson}, title = {Functional analysis of metagenomes and metatranscriptomes using {SEED} and {KEGG}}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S21}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S21}, doi = {10.1186/1471-2105-12-S1-S21}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/MitraRRUGMWH11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MonjiKOO11, author = {Hiroyuki Monji and Satoshi Koizumi and Tomonobu Ozaki and Takenao Ohkawa}, title = {Interaction site prediction by structural similarity to neighboring clusters in protein-protein interaction networks}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S39}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S39}, doi = {10.1186/1471-2105-12-S1-S39}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MonjiKOO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MuradSY11, author = {William Murad and Rahul Singh and Ten{-}Yang Yen}, title = {An efficient algorithmic approach for mass spectrometry-based disulfide connectivity determination using multi-ion analysis}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S12}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S12}, doi = {10.1186/1471-2105-12-S1-S12}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MuradSY11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ParidaPJ11, author = {Laxmi Parida and Pier Palamara and Asif Javed}, title = {A minimal descriptor of an ancestral recombinations graph}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S6}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S6}, doi = {10.1186/1471-2105-12-S1-S6}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ParidaPJ11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ParkB11, author = {Yongjin Park and Joel S. Bader}, title = {Resolving the structure of interactomes with hierarchical agglomerative clustering}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S44}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S44}, doi = {10.1186/1471-2105-12-S1-S44}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ParkB11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ParkK11, author = {Keunwan Park and Dongsup Kim}, title = {Modeling allosteric signal propagation using protein structure networks}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S23}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S23}, doi = {10.1186/1471-2105-12-S1-S23}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ParkK11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ParkKLYK11, author = {Yu Rang Park and Jihun Kim and Hye Won Lee and Young Jo Yoon and Ju Han Kim}, title = {GOChase-II: correcting semantic inconsistencies from Gene Ontology-based annotations for gene products}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S40}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S40}, doi = {10.1186/1471-2105-12-S1-S40}, timestamp = {Thu, 28 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ParkKLYK11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ParkN11, author = {Sung{-}Joon Park and Kenta Nakai}, title = {A regression analysis of gene expression in {ES} cells reveals two gene classes that are significantly different in epigenetic patterns}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S50}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S50}, doi = {10.1186/1471-2105-12-S1-S50}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ParkN11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/QianY11, author = {Xiaoning Qian and Byung{-}Jun Yoon}, title = {Comparative analysis of protein interaction networks reveals that conserved pathways are susceptible to {HIV-1} interception}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S19}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S19}, doi = {10.1186/1471-2105-12-S1-S19}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/QianY11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/RhoKJLBSSLKYKLK11, author = {Kyoohyoung Rho and Bumjin Kim and Youngjun Jang and Sanghyun Lee and Taejeong Bae and Jihae Seo and Chae Hwa Seo and Ji{-}Hyun Lee and Hyunjung Kang and Ungsik Yu and Sunghoon Kim and Sanghyuk Lee and Wan Kyu Kim}, title = {{GARNET} - gene set analysis with exploration of annotation relations}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S25}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S25}, doi = {10.1186/1471-2105-12-S1-S25}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/RhoKJLBSSLKYKLK11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SahraeianY11, author = {Sayed Mohammad Ebrahim Sahraeian and Byung{-}Jun Yoon}, title = {PicXAA-R: Efficient structural alignment of multiple {RNA} sequences using a greedy approach}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S38}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S38}, doi = {10.1186/1471-2105-12-S1-S38}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SahraeianY11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SaitoSS11, author = {Yutaka Saito and Kengo Sato and Yasubumi Sakakibara}, title = {Fast and accurate clustering of noncoding RNAs using ensembles of sequence alignments and secondary structures}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S48}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S48}, doi = {10.1186/1471-2105-12-S1-S48}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SaitoSS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SarkarKS11, author = {Anita Sarkar and Sonu Kumar and Durai Sundar}, title = {The {G} protein-coupled receptors in the pufferfish Takifugu rubripes}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S3}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S3}, doi = {10.1186/1471-2105-12-S1-S3}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/SarkarKS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ShaoWWYLZB11, author = {Mingfu Shao and Sheng Wang and Chao Wang and Xiongying Yuan and Shuai Li and Wei{-}Mou Zheng and Dongbo Bu}, title = {Incorporating Ab Initio energy into threading approaches for protein structure prediction}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S54}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S54}, doi = {10.1186/1471-2105-12-S1-S54}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ShaoWWYLZB11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SongHRM11, author = {Giltae Song and Chih{-}Hao Hsu and Cathy Riemer and Webb Miller}, title = {Evaluation of methods for detecting conversion events in gene clusters}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S45}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S45}, doi = {10.1186/1471-2105-12-S1-S45}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SongHRM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SongPCSKK11, author = {Young Soo Song and Chan Hee Park and Hee{-}Joon Chung and Hyunjung Shin and Jihun Kim and Ju Han Kim}, title = {Semantically enabled and statistically supported biological hypothesis testing with tissue microarray databases}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S51}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S51}, doi = {10.1186/1471-2105-12-S1-S51}, timestamp = {Thu, 28 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/SongPCSKK11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SuBBAM11, author = {Gang Su and Charles F. Burant and Christopher W. Beecher and Brian D. Athey and Fan Meng}, title = {Integrated metabolome and transcriptome analysis of the {NCI60} dataset}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S36}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S36}, doi = {10.1186/1471-2105-12-S1-S36}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SuBBAM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/TendulkarW11, author = {Ashish V. Tendulkar and Pramod P. Wangikar}, title = {Characterization and sequence prediction of structural variations in {\(\alpha\)}-helix}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S20}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S20}, doi = {10.1186/1471-2105-12-S1-S20}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/TendulkarW11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Totrov11, author = {Maxim Totrov}, title = {Ligand binding site superposition and comparison based on Atomic Property Fields: identification of distant homologues, convergent evolution and PDB-wide clustering of binding sites}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S35}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S35}, doi = {10.1186/1471-2105-12-S1-S35}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Totrov11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WengCHL11, author = {Yi{-}Zhong Weng and Darby Tien{-}Hao Chang and Yu{-}Feng Huang and Chih{-}Wei Lin}, title = {A study on the flexibility of enzyme active sites}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S32}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S32}, doi = {10.1186/1471-2105-12-S1-S32}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WengCHL11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/XiaDLT11, author = {Fei Xia and Yong Dou and Guo{-}Qing Lei and Yusong Tan}, title = {{FPGA} accelerator for protein secondary structure prediction based on the {GOR} algorithm}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S5}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S5}, doi = {10.1186/1471-2105-12-S1-S5}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/XiaDLT11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YangAD11, author = {Xiao Yang and Srinivas Aluru and Karin S. Dorman}, title = {Repeat-aware modeling and correction of short read errors}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S52}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S52}, doi = {10.1186/1471-2105-12-S1-S52}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/YangAD11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YangHYZ11, author = {Pengyi Yang and Joshua Wing Kei Ho and Jean Yee Hwa Yang and Bing Bing Zhou}, title = {Gene-gene interaction filtering with ensemble of filters}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S10}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S10}, doi = {10.1186/1471-2105-12-S1-S10}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/YangHYZ11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YangWHYXY11, author = {Can Yang and Xiang Wan and Zengyou He and Qiang Yang and Hong Xue and Weichuan Yu}, title = {The choice of null distributions for detecting gene-gene interactions in genome-wide association studies}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S26}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S26}, doi = {10.1186/1471-2105-12-S1-S26}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/YangWHYXY11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Yoon11, author = {Byung{-}Jun Yoon}, title = {Enhanced stochastic optimization algorithm for finding effective multi-target therapeutics}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S18}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S18}, doi = {10.1186/1471-2105-12-S1-S18}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Yoon11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YoonYLKNPPL11, author = {Joo Yoon and Jeonghun Yeom and Heebum Lee and Kyutae Kim and Seungjin Na and Kunsoo Park and Eunok Paek and Cheolju Lee}, title = {High-throughput peptide quantification using mTRAQ reagent triplex}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S46}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S46}, doi = {10.1186/1471-2105-12-S1-S46}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/YoonYLKNPPL11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhangSJ11, author = {Wangshu Zhang and Fengzhu Sun and Rui Jiang}, title = {Integrating multiple protein-protein interaction networks to prioritize disease genes: a Bayesian regression approach}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S11}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S11}, doi = {10.1186/1471-2105-12-S1-S11}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhangSJ11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhaoCBWSSMEM11, author = {Hui Zhao and Lore Cloots and Tim Van den Bulcke and Yan Wu and Riet De Smet and Valerie Storms and Pieter Meysman and Kristof Engelen and Kathleen Marchal}, title = {Query-based biclustering of gene expression data using Probabilistic Relational Models}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S37}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S37}, doi = {10.1186/1471-2105-12-S1-S37}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoCBWSSMEM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhengS11, author = {Chunfang Zheng and David Sankoff}, title = {On the {PATHGROUPS} approach to rapid small phylogeny}, journal = {{BMC} Bioinform.}, volume = {12}, number = {{S-1}}, pages = {S4}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-S1-S4}, doi = {10.1186/1471-2105-12-S1-S4}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhengS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AgarwalVBS10, author = {Sumeet Agarwal and Candida Vaz and Alok Bhattacharya and Ashwin Srinivasan}, title = {Prediction of novel precursor miRNAs using a context-sensitive hidden Markov model {(CSHMM)}}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {29}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S29}, doi = {10.1186/1471-2105-11-S1-S29}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/AgarwalVBS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Al-NasrSH10, author = {Kamal Al{-}Nasr and Weitao Sun and Jing He}, title = {Structure prediction for the helical skeletons detected from the low resolution protein density map}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {44}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S44}, doi = {10.1186/1471-2105-11-S1-S44}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Al-NasrSH10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Bader10, author = {Martin Bader}, title = {Genome rearrangements with duplications}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {27}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S27}, doi = {10.1186/1471-2105-11-S1-S27}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Bader10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BansalBE10, author = {Mukul S. Bansal and J. Gordon Burleigh and Oliver Eulenstein}, title = {Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {42}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S42}, doi = {10.1186/1471-2105-11-S1-S42}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/BansalBE10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BhardwajGL10, author = {Nitin Bhardwaj and Mark Gerstein and Hui Lu}, title = {Genome-wide sequence-based prediction of peripheral proteins using a novel semi-supervised learning technique}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {6}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S6}, doi = {10.1186/1471-2105-11-S1-S6}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/BhardwajGL10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BoucherK10, author = {Christina Boucher and James King}, title = {Fast motif recognition via application of statistical thresholds}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {11}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S11}, doi = {10.1186/1471-2105-11-S1-S11}, timestamp = {Mon, 10 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/BoucherK10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BrownG10, author = {Daniel G. Brown and Daniil Golod}, title = {Decoding HMMs using the \emph{k }best paths: algorithms and applications}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {28}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S28}, doi = {10.1186/1471-2105-11-S1-S28}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/BrownG10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BrownT10, author = {Daniel G. Brown and Jakub Truszkowski}, title = {New decoding algorithms for Hidden Markov Models using distance measures on labellings}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {40}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S40}, doi = {10.1186/1471-2105-11-S1-S40}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/BrownT10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChanLSYLH10, author = {Wen{-}Ching Chan and Po{-}Huang Liang and Yan{-}Ping Shih and Ueng{-}Cheng Yang and Wen{-}Chang Lin and Chun{-}Nan Hsu}, title = {Learning to predict expression efficacy of vectors in recombinant protein production}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {21}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S21}, doi = {10.1186/1471-2105-11-S1-S21}, timestamp = {Mon, 23 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ChanLSYLH10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChandraGNPP10, author = {Vinod S. S. Chandra and Reshmi Girijadevi and Achuthsankar S. Nair and Sreenadhan S. Pillai and Radhakrishna M. Pillai}, title = {MTar: a computational microRNA target prediction architecture for human transcriptome}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {2}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S2}, doi = {10.1186/1471-2105-11-S1-S2}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChandraGNPP10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChangSL10, author = {Darby Tien{-}Hao Chang and Yu{-}Tang Syu and Po{-}Chang Lin}, title = {Predicting the protein-protein interactions using primary structures with predicted protein surface}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {3}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S3}, doi = {10.1186/1471-2105-11-S1-S3}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChangSL10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenLL10, author = {Yixuan Chen and Xin Li and Jing Li}, title = {A novel approach for haplotype-based association analysis using family data}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {45}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S45}, doi = {10.1186/1471-2105-11-S1-S45}, timestamp = {Fri, 19 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenLL10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChinCHKL10, author = {Chia{-}Hao Chin and Shu{-}Hwa Chen and Chin{-}Wen Ho and Ming{-}Tat Ko and Chung{-}Yen Lin}, title = {A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {25}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S25}, doi = {10.1186/1471-2105-11-S1-S25}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChinCHKL10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChungP10, author = {Won{-}Hyoung Chung and Seong{-}Bae Park}, title = {Hit integration for identifying optimal spaced seeds}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {37}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S37}, doi = {10.1186/1471-2105-11-S1-S37}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChungP10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/CirielloGG10, author = {Giovanni Ciriello and Claudio Gallina and Concettina Guerra}, title = {Analysis of interactions between ribosomal proteins and {RNA} structural motifs}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {41}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S41}, doi = {10.1186/1471-2105-11-S1-S41}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/CirielloGG10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/CominV10, author = {Matteo Comin and Davide Verzotto}, title = {Classification of protein sequences by means of irredundant patterns}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {16}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S16}, doi = {10.1186/1471-2105-11-S1-S16}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/CominV10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/DongASL10, author = {Xianjun Dong and Altuna Akalin and Yogita Sharma and Boris Lenhard}, title = {Translog, a web browser for studying the expression divergence of homologous genes}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {59}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S59}, doi = {10.1186/1471-2105-11-S1-S59}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/DongASL10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GargTR10a, author = {Aarti Garg and Rupinder Tewari and Gajendra P. S. Raghava}, title = {Virtual Screening of potential drug-like inhibitors against Lysine/DAP pathway of \emph{Mycobacterium tuberculosis}}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {53}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S53}, doi = {10.1186/1471-2105-11-S1-S53}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/GargTR10a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GeorgeT10, author = {Tina P. George and Tessamma Thomas}, title = {Discrete wavelet transform de-noising in eukaryotic gene splicing}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {50}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S50}, doi = {10.1186/1471-2105-11-S1-S50}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/GeorgeT10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GuptaWBPPD10, author = {Ravi Gupta and Priyankara Wikramasinghe and Anirban Bhattacharyya and Francisco A. Perez and Sharmistha Pal and Ramana V. Davuluri}, title = {Annotation of gene promoters by integrative data-mining of ChIP-seq Pol-II enrichment data}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {65}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S65}, doi = {10.1186/1471-2105-11-S1-S65}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/GuptaWBPPD10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Han10, author = {Henry Han}, title = {Nonnegative principal component analysis for mass spectral serum profiles and biomarker discovery}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {1}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S1}, doi = {10.1186/1471-2105-11-S1-S1}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Han10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HsiehCHWO10, author = {Chih{-}Hung Hsieh and Darby Tien{-}Hao Chang and Cheng{-}Hao Hsueh and Chi{-}Yeh Wu and Yen{-}Jen Oyang}, title = {Predicting microRNA precursors with a generalized Gaussian components based density estimation algorithm}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {52}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S52}, doi = {10.1186/1471-2105-11-S1-S52}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HsiehCHWO10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuJE10, author = {Pingzhao Hu and Hui Jiang and Andrew Emili}, title = {Predicting protein functions by relaxation labelling protein interaction network}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {64}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S64}, doi = {10.1186/1471-2105-11-S1-S64}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HuJE10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuZ10, author = {Jianjun Hu and Fan Zhang}, title = {BayesMotif: de novo protein sorting motif discovery from impure datasets}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {66}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S66}, doi = {10.1186/1471-2105-11-S1-S66}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HuZ10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuangL10, author = {Yezhou Huang and Shao Li}, title = {Detection of characteristic sub pathway network for angiogenesis based on the comprehensive pathway network}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {32}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S32}, doi = {10.1186/1471-2105-11-S1-S32}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/HuangL10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JoshiYLJPGSFMMXS10, author = {Trupti Joshi and Zhe Yan and Marc Libault and Dong{-}Hoon Jeong and Sunhee Park and Pamela J. Green and D. Janine Sherrier and Andrew Farmer and Greg May and Blake C. Meyers and Dong Xu and Gary Stacey}, title = {Prediction of novel miRNAs and associated target genes in \emph{Glycine max}}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {14}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S14}, doi = {10.1186/1471-2105-11-S1-S14}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/JoshiYLJPGSFMMXS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JungMYK10, author = {Inkyung Jung and Akihisa Matsuyama and Minoru Yoshida and Dongsup Kim}, title = {PostMod: sequence based prediction of kinase-specific phosphorylation sites with indirect relationship}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {10}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S10}, doi = {10.1186/1471-2105-11-S1-S10}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JungMYK10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KabirNI10, author = {Mitra Kabir and Nasimul Noman and Hitoshi Iba}, title = {Reverse engineering gene regulatory network from microarray data using linear time-variant model}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {56}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S56}, doi = {10.1186/1471-2105-11-S1-S56}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KabirNI10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KrishnanLV10, author = {S. P. T. Krishnan and Sim Sze Liang and Bharadwaj Veeravalli}, title = {Towards high performance computing for molecular structure prediction using {IBM} Cell Broadband Engine - an implementation perspective}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {36}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S36}, doi = {10.1186/1471-2105-11-S1-S36}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KrishnanLV10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KulkarniKMPSV10, author = {Vishwesh V. Kulkarni and Venkatesh Kareenhalli and Pushkar Malakar and Lucy Y. Pao and Michael G. Safonov and Ganesh A. Viswanathan}, title = {Stability analysis of the {GAL} regulatory network in \emph{Saccharomyces cerevisiae} and \emph{Kluyveromyces lactis}}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {43}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S43}, doi = {10.1186/1471-2105-11-S1-S43}, timestamp = {Wed, 29 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KulkarniKMPSV10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LataMR10, author = {Sneh Lata and Nitish K. Mishra and Gajendra P. S. Raghava}, title = {AntiBP2: improved version of antibacterial peptide prediction}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {19}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S19}, doi = {10.1186/1471-2105-11-S1-S19}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LataMR10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiCYA10, author = {Limin Li and Wai{-}Ki Ching and Takako Yamaguchi and Kiyoko F. Aoki{-}Kinoshita}, title = {A weighted \emph{q}-gram method for glycan structure classification}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {33}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S33}, doi = {10.1186/1471-2105-11-S1-S33}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LiCYA10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiP10, author = {Yongjin Li and Jagdish Chandra Patra}, title = {Integration of multiple data sources to prioritize candidate genes using discounted rating system}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {20}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S20}, doi = {10.1186/1471-2105-11-S1-S20}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LiP10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LinRSM10, author = {Yu Lin and Vaibhav Rajan and Krister M. Swenson and Bernard M. E. Moret}, title = {Estimating true evolutionary distances under rearrangements, duplications, and losses}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {54}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S54}, doi = {10.1186/1471-2105-11-S1-S54}, timestamp = {Tue, 31 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/LinRSM10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiuSXM10, author = {Xiaowen Liu and Baozhen Shan and Lei Xin and Bin Ma}, title = {Better score function for peptide identification with {ETD} {MS/MS} spectra}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {4}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S4}, doi = {10.1186/1471-2105-11-S1-S4}, timestamp = {Wed, 15 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LiuSXM10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LuZF10, author = {Zaixin Lu and Zhiyu Zhao and Bin Fu}, title = {Efficient protein alignment algorithm for protein search}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {34}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S34}, doi = {10.1186/1471-2105-11-S1-S34}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LuZF10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ManoTBP10, author = {Adi Mano and Tamir Tuller and Oded B{\'{e}}j{\`{a}} and Ron Y. Pinter}, title = {Comparative classification of species and the study of pathway evolution based on the alignment of metabolic pathways}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {38}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S38}, doi = {10.1186/1471-2105-11-S1-S38}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ManoTBP10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MatthewsW10, author = {Suzanne J. Matthews and Tiffani L. Williams}, title = {MrsRF: an efficient MapReduce algorithm for analyzing large collections of evolutionary trees}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {15}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S15}, doi = {10.1186/1471-2105-11-S1-S15}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MatthewsW10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MehanNDWZ10, author = {Michael R. Mehan and Juan Nunez{-}Iglesias and Chao Dai and Michael S. Waterman and Xianghong Jasmine Zhou}, title = {An integrative modular approach to systematically predict gene-phenotype associations}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {62}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S62}, doi = {10.1186/1471-2105-11-S1-S62}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MehanNDWZ10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MeiF10, author = {Suyu Mei and Wang Fei}, title = {Amino acid classification based spectrum kernel fusion for protein subnuclear localization}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {17}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S17}, doi = {10.1186/1471-2105-11-S1-S17}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MeiF10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MerkleMW10, author = {Daniel Merkle and Martin Middendorf and Nicolas Wieseke}, title = {A parameter-adaptive dynamic programming approach for inferring cophylogenies}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {60}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S60}, doi = {10.1186/1471-2105-11-S1-S60}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MerkleMW10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MishraR10, author = {Nitish K. Mishra and Gajendra P. S. Raghava}, title = {Prediction of {FAD} interacting residues in a protein from its primary sequence using evolutionary information}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {48}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S48}, doi = {10.1186/1471-2105-11-S1-S48}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MishraR10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MitraBMZ10, author = {Ramkrishna Mitra and Sanghamitra Bandyopadhyay and Ujjwal Maulik and Michael Q. Zhang}, title = {SFSSClass: an integrated approach for miRNA based tumor classification}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {22}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S22}, doi = {10.1186/1471-2105-11-S1-S22}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MitraBMZ10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MitraSH10, author = {Suparna Mitra and Max Schubach and Daniel H. Huson}, title = {Short clones or long clones? {A} simulation study on the use of paired reads in metagenomics}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {12}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S12}, doi = {10.1186/1471-2105-11-S1-S12}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/MitraSH10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MohamedCG10, author = {Thahir P. Mohamed and Jaime G. Carbonell and Madhavi Ganapathiraju}, title = {Active learning for human protein-protein interaction prediction}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {57}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S57}, doi = {10.1186/1471-2105-11-S1-S57}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MohamedCG10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/OsmanbeyogluWCG10, author = {Hatice U. Osmanbeyoglu and Jessica A. Wehner and Jaime G. Carbonell and Madhavi Ganapathiraju}, title = {Active machine learning for transmembrane helix prediction}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {58}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S58}, doi = {10.1186/1471-2105-11-S1-S58}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/OsmanbeyogluWCG10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PandeyKG10, author = {Jayesh Pandey and Mehmet Koyut{\"{u}}rk and Ananth Grama}, title = {Functional characterization and topological modularity of molecular interaction networks}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {35}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S35}, doi = {10.1186/1471-2105-11-S1-S35}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/PandeyKG10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PanditS10, author = {Aridaman Pandit and Somdatta Sinha}, title = {Using genomic signatures for {HIV-1} sub-typing}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {26}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S26}, doi = {10.1186/1471-2105-11-S1-S26}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/PanditS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Paragi-VedanthiD10, author = {Padmapriya Paragi{-}Vedanthi and Mukesh Doble}, title = {Comparison of PGH\({}_{\mbox{2 }}\)binding site in prostaglandin synthases}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {51}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S51}, doi = {10.1186/1471-2105-11-S1-S51}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Paragi-VedanthiD10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ParidaM10, author = {Laxmi Parida and Gene Myers}, title = {{APBC} 2010. The Eighth Asia Pacific Bioinformatics Conference Bangalore, India, 18-21 January 2010}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {0}, year = {2010}, url = {http://www.biomedcentral.com/1471-2105/11/S1/I1}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ParidaM10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ParkH10, author = {Byungkyu Park and Kyungsook Han}, title = {An ontology-based search engine for protein-protein interactions}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {23}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S23}, doi = {10.1186/1471-2105-11-S1-S23}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ParkH10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/RajanXLSM10, author = {Vaibhav Rajan and Andrew Wei Xu and Yu Lin and Krister M. Swenson and Bernard M. E. Moret}, title = {Heuristics for the inversion median problem}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {30}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S30}, doi = {10.1186/1471-2105-11-S1-S30}, timestamp = {Tue, 31 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/RajanXLSM10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/RiveraVB10, author = {Corban G. Rivera and Rachit Vakil and Joel S. Bader}, title = {NeMo: Network Module identification in Cytoscape}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {61}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S61}, doi = {10.1186/1471-2105-11-S1-S61}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/RiveraVB10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SaigoHKT10, author = {Hiroto Saigo and Masahiro Hattori and Hisashi Kashima and Koji Tsuda}, title = {Reaction graph kernels predict {EC} numbers of unknown enzymatic reactions in plant secondary metabolism}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {31}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S31}, doi = {10.1186/1471-2105-11-S1-S31}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SaigoHKT10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SeokKDX10, author = {Junhee Seok and Amit Kaushal and Ronald W. Davis and Wenzhong Xiao}, title = {Knowledge-based analysis of microarrays for the discovery of transcriptional regulation relationships}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {8}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S8}, doi = {10.1186/1471-2105-11-S1-S8}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/SeokKDX10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SomanSS10, author = {Soja Saghar Soman and Krishnankutty Chandrika Sivakumar and Easwaran Sreekumar}, title = {Molecular dynamics simulation studies and \emph{in vitro }site directed mutagenesis of avian beta-defensin Apl{\_}AvBD2}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {7}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S7}, doi = {10.1186/1471-2105-11-S1-S7}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SomanSS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SorathiyaBL10, author = {Anil Sorathiya and Andrea Bracciali and Pietro Li{\`{o}}}, title = {Formal reasoning on qualitative models of coinfection of {HIV} and Tuberculosis and {HAART} therapy}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {67}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S67}, doi = {10.1186/1471-2105-11-S1-S67}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SorathiyaBL10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SundaramurthySSGS10, author = {Pandurangan Sundaramurthy and Khader Shameer and Raashi Sreenivasan and Sunita Gakkhar and Ramanathan Sowdhamini}, title = {{HORI:} a web server to compute Higher Order Residue Interactions in protein structures}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {24}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S24}, doi = {10.1186/1471-2105-11-S1-S24}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SundaramurthySSGS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/UllahS10, author = {Abu Zafer M. Dayem Ullah and Kathleen Steinh{\"{o}}fel}, title = {A hybrid approach to protein folding problem integrating constraint programming with local search}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {39}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S39}, doi = {10.1186/1471-2105-11-S1-S39}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/UllahS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/VijayabaskarV10, author = {M. S. Vijayabaskar and Saraswathi Vishveshwara}, title = {Comparative analysis of thermophilic and mesophilic proteins using Protein Energy Networks}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {49}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S49}, doi = {10.1186/1471-2105-11-S1-S49}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/VijayabaskarV10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YangPC10, author = {Jianyi Yang and Zhen{-}Ling Peng and Xin Chen}, title = {Prediction of protein structural classes for low-homology sequences based on predicted secondary structure}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {9}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S9}, doi = {10.1186/1471-2105-11-S1-S9}, timestamp = {Mon, 25 Dec 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/YangPC10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YangWYXY10, author = {Can Yang and Xiang Wan and Qiang Yang and Hong Xue and Weichuan Yu}, title = {Identifying main effects and epistatic interactions from large-scale {SNP} data via adaptive group Lasso}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {18}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S18}, doi = {10.1186/1471-2105-11-S1-S18}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/YangWYXY10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YangZMMJ10, author = {Yang Yang and Jiayuan Zhao and Robyn L. Morgan and Wenbo Ma and Tao Jiang}, title = {Computational prediction of type {III} secreted proteins from gram-negative bacteria}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {47}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S47}, doi = {10.1186/1471-2105-11-S1-S47}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/YangZMMJ10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YangZZZ10, author = {Pengyi Yang and Bing Bing Zhou and Zili Zhang and Albert Y. Zomaya}, title = {A multi-filter enhanced genetic ensemble system for gene selection and sample classification of microarray data}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {5}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S5}, doi = {10.1186/1471-2105-11-S1-S5}, timestamp = {Thu, 20 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/YangZZZ10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YeturuUKC10, author = {Kalidas Yeturu and Tapani Utriainen and Graham J. L. Kemp and Nagasuma R. Chandra}, title = {An automated framework for understanding structural variations in the binding grooves of {MHC} class {II} molecules}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {55}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S55}, doi = {10.1186/1471-2105-11-S1-S55}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/YeturuUKC10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhangBKR10, author = {Lei Zhang and James Bailey and Arun Siddharth Konagurthu and Kotagiri Ramamohanarao}, title = {A fast indexing approach for protein structure comparison}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {46}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S46}, doi = {10.1186/1471-2105-11-S1-S46}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhangBKR10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhangL10, author = {Melvin Zhang and Hon Wai Leong}, title = {Bidirectional best hit \emph{r}-window gene clusters}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {63}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-S1-S63}, doi = {10.1186/1471-2105-11-S1-S63}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhangL10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GanguliMBRMD10a, title = {In silico screening of herbal and nanoparticle lead compounds for effectivity against H5N1, {H1N1} neuraminidase and telomerase}, journal = {{BMC} Bioinform.}, volume = {11}, number = {{S-1}}, pages = {13}, year = {2010}, note = {Withdrawn.}, url = {https://doi.org/10.1186/1471-2105-11-S1-S13}, doi = {10.1186/1471-2105-11-S1-S13}, timestamp = {Tue, 08 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/GanguliMBRMD10a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AutioKSKHA09, author = {Reija Autio and Sami Kilpinen and Matti Saarela and Olli{-}P. Kallioniemi and Sampsa Hautaniemi and Jaakko Astola}, title = {Comparison of Affymetrix data normalization methods using 6, 926 experiments across five array generations}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S24}, doi = {10.1186/1471-2105-10-S1-S24}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/AutioKSKHA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AutioSJHA09, author = {Reija Autio and Matti Saarela and Anna{-}Kaarina J{\"{a}}rvinen and Sampsa Hautaniemi and Jaakko Astola}, title = {Advanced analysis and visualization of gene copy number and expression data}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S70}, doi = {10.1186/1471-2105-10-S1-S70}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/AutioSJHA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Bader09, author = {Martin Bader}, title = {Sorting by reversals, block interchanges, tandem duplications, and deletions}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S9}, doi = {10.1186/1471-2105-10-S1-S9}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Bader09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BesenbacherPM09, author = {S{\o}ren Besenbacher and Christian N. S. Pedersen and Thomas Mailund}, title = {A fast algorithm for genome-wide haplotype pattern mining}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S74}, doi = {10.1186/1471-2105-10-S1-S74}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/BesenbacherPM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Bi09, author = {Chengpeng Bi}, title = {{DNA} motif alignment by evolving a population of Markov chains}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S13}, doi = {10.1186/1471-2105-10-S1-S13}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Bi09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BockerBK09, author = {Sebastian B{\"{o}}cker and Sebastian Briesemeister and Gunnar W. Klau}, title = {On optimal comparability editing with applications to molecular diagnostics}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S61}, doi = {10.1186/1471-2105-10-S1-S61}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/BockerBK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChanCLMSRD09, author = {Chi Yu Chan and C. Steven Carmack and Dang D. Long and Anil Maliyekkel and Yu Shao and Igor B. Roninson and Ye Ding}, title = {A structural interpretation of the effect of GC-content on efficiency of {RNA} interference}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S33}, doi = {10.1186/1471-2105-10-S1-S33}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChanCLMSRD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChenX09, author = {Jing Chen and Guangcheng Xi}, title = {An unsupervised partition method based on association delineated revised mutual information}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S63}, doi = {10.1186/1471-2105-10-S1-S63}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChenX09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChinLLY09, author = {Francis Y. L. Chin and Henry C. M. Leung and Wei{-}Lin Li and Siu{-}Ming Yiu}, title = {Finding optimal threshold for correction error reads in {DNA} assembling}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S15}, doi = {10.1186/1471-2105-10-S1-S15}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChinLLY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/DaiDXFDWH09, author = {Zhiming Dai and Xianhua Dai and Qian Xiang and Jihua Feng and Yangyang Deng and Jiang Wang and Caisheng He}, title = {Transcriptional interaction-assisted identification of dynamic nucleosome positioning}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S31}, doi = {10.1186/1471-2105-10-S1-S31}, timestamp = {Tue, 19 Dec 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/DaiDXFDWH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/DharanN09, author = {Smitha Dharan and Achuthsankar S. Nair}, title = {Biclustering of gene expression data using reactive greedy randomized adaptive search procedure}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S27}, doi = {10.1186/1471-2105-10-S1-S27}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/DharanN09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/FreudenbergWYL09, author = {Jan Freudenberg and Mingyi Wang and Yaning Yang and Wentian Li}, title = {Partial correlation analysis indicates causal relationships between GC-content, exon density and recombination rate in the human genome}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S66}, doi = {10.1186/1471-2105-10-S1-S66}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/FreudenbergWYL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/FuJLWYCLXWLWSGQH09, author = {Yan Fu and Wei Jia and Zhuang Lu and Haipeng Wang and Zuofei Yuan and Hao Chi and You Li and Liyun Xiu and Wenping Wang and Chao Liu and Leheng Wang and Ruixiang Sun and Wen Gao and Xiaohong Qian and Si{-}Min He}, title = {Efficient discovery of abundant post-translational modifications and spectral pairs using peptide mass and retention time differences}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S50}, doi = {10.1186/1471-2105-10-S1-S50}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/FuJLWYCLXWLWSGQH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/GambinW09, author = {Tomasz Gambin and Krzysztof Walczak}, title = {A new classification method using array Comparative Genome Hybridization data, based on the concept of Limited Jumping Emerging Patterns}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S64}, doi = {10.1186/1471-2105-10-S1-S64}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/GambinW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HanZF09, author = {Pengfei Han and Xiuzhen Zhang and Zhi{-}Ping Feng}, title = {Predicting disordered regions in proteins using the profiles of amino acid indices}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S42}, doi = {10.1186/1471-2105-10-S1-S42}, timestamp = {Mon, 20 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HanZF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HaoZPTGWZL09, author = {Pei Hao and Siyuan Zheng and Jie Ping and Kang Tu and Christian Gieger and Rui Wang{-}Sattler and Yang Zhong and Yixue Li}, title = {Human gene expression sensitivity according to large scale meta-analysis}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S56}, doi = {10.1186/1471-2105-10-S1-S56}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/HaoZPTGWZL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HassanHBMHR09, author = {Md. Rafiul Hassan and M. Maruf Hossain and James Bailey and Geoff MacIntyre and Joshua Wing Kei Ho and Kotagiri Ramamohanarao}, title = {A voting approach to identify a small number of highly predictive genes using multiple classifiers}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S19}, doi = {10.1186/1471-2105-10-S1-S19}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HassanHBMHR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HossainAS09, author = {Mohammad Sajjad Hossain and Navid Azimi and Steven Skiena}, title = {Crystallizing short-read assemblies around seeds}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S16}, doi = {10.1186/1471-2105-10-S1-S16}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HossainAS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuangKY09, author = {Jhang{-}Wei Huang and Chwan{-}Chuen King and Jinn{-}Moon Yang}, title = {Co-evolution positions and rules for antigenic variants of human influenza {A/H3N2} viruses}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S41}, doi = {10.1186/1471-2105-10-S1-S41}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HuangKY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuangLR09, author = {Fenix W. D. Huang and Linda Y. M. Li and Christian M. Reidys}, title = {Sequence-structure relations of pseudoknot {RNA}}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S39}, doi = {10.1186/1471-2105-10-S1-S39}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HuangLR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HuangWLZ09, author = {Wenhui Huang and Pengyuan Wang and Zhen Liu and Liqing Zhang}, title = {Identifying disease associations via genome-wide association studies}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S68}, doi = {10.1186/1471-2105-10-S1-S68}, timestamp = {Tue, 21 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HuangWLZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HusonRMAS09, author = {Daniel H. Huson and Daniel C. Richter and Suparna Mitra and Alexander F. Auch and Stephan C. Schuster}, title = {Methods for comparative metagenomics}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S12}, doi = {10.1186/1471-2105-10-S1-S12}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/HusonRMAS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JacksonSA09, author = {Benjamin G. Jackson and Patrick S. Schnable and Srinivas Aluru}, title = {Parallel short sequence assembly of transcriptomes}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S14}, doi = {10.1186/1471-2105-10-S1-S14}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JacksonSA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JiaHBZC09, author = {Yi Jia and Jun Huan and Vincent Buhr and Jintao Zhang and Leonidas N. Carayannopoulos}, title = {Towards comprehensive structural motif mining for better fold annotation in the "twilight zone" of sequence dissimilarity}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S46}, doi = {10.1186/1471-2105-10-S1-S46}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JiaHBZC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JiangTWF09, author = {Rui Jiang and Wanwan Tang and Xuebing Wu and Wenhui Fu}, title = {A random forest approach to the detection of epistatic interactions in case-control studies}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S65}, doi = {10.1186/1471-2105-10-S1-S65}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JiangTWF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JoungF09, author = {Je{-}Gun Joung and Zhangjun Fei}, title = {Computational identification of condition-specific miRNA targets based on gene expression profiles and sequence information}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S34}, doi = {10.1186/1471-2105-10-S1-S34}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JoungF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KadriHB09, author = {Sabah Kadri and Veronica F. Hinman and Panayiotis V. Benos}, title = {HHMMiR: efficient \emph{de novo }prediction of microRNAs using hierarchical hidden Markov models}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S35}, doi = {10.1186/1471-2105-10-S1-S35}, timestamp = {Wed, 22 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KadriHB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KimHH09, author = {Jisu Kim and De{-}Shuang Huang and Kyungsook Han}, title = {Finding motif pairs in the interactions between heterogeneous proteins via bootstrapping and boosting}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S57}, doi = {10.1186/1471-2105-10-S1-S57}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KimHH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Klau09, author = {Gunnar W. Klau}, title = {A new graph-based method for pairwise global network alignment}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S59}, doi = {10.1186/1471-2105-10-S1-S59}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Klau09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KolarikKH09, author = {Corinna Kol{\'{a}}rik and Roman Klinger and Martin Hofmann{-}Apitius}, title = {Identification of histone modifications in biomedical text for supporting epigenomic research}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S28}, doi = {10.1186/1471-2105-10-S1-S28}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/KolarikKH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LaiES09, author = {Yinglei Lai and Sarah E. Eckenrode and Jin{-}Xiong She}, title = {A statistical framework for integrating two microarray data sets in differential expression analysis}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S23}, doi = {10.1186/1471-2105-10-S1-S23}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LaiES09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LeeAH09, author = {Chih Lee and Ali Abdool and Chun{-}Hsi Huang}, title = {PCA-based population structure inference with generic clustering algorithms}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S73}, doi = {10.1186/1471-2105-10-S1-S73}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LeeAH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiLG09, author = {Wentian Li and Annette Lee and Peter K. Gregersen}, title = {Copy-number-variation and copy-number-alteration region detection by cumulative plots}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S67}, doi = {10.1186/1471-2105-10-S1-S67}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LiLG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LinBE09, author = {Harris T. Lin and J. Gordon Burleigh and Oliver Eulenstein}, title = {Triplet supertree heuristics for the tree of life}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S8}, doi = {10.1186/1471-2105-10-S1-S8}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LinBE09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LinCLCX09, author = {Guan Ning Lin and Zhipeng Cai and Guohui Lin and Sounak Chakraborty and Dong Xu}, title = {ComPhy: prokaryotic composite distance phylogenies inferred from whole-genome gene sets}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S5}, doi = {10.1186/1471-2105-10-S1-S5}, timestamp = {Wed, 30 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/LinCLCX09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LiuHKHZ09, author = {Chun{-}Chi Liu and Jianjun Hu and Mrinal Kalakrishnan and Haiyan Huang and Xianghong Jasmine Zhou}, title = {Integrative disease classification based on cross-platform microarray data}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S25}, doi = {10.1186/1471-2105-10-S1-S25}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LiuHKHZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/LongZO09, author = {Quan Long and Qingrun Zhang and Jurg Ott}, title = {Detecting disease-associated genotype patterns}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S75}, doi = {10.1186/1471-2105-10-S1-S75}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/LongZO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MeulemanEGWR09, author = {Wouter Meuleman and Judith Y. M. N. Engwegen and Marie{-}Christine W. Gast and Lodewyk F. A. Wessels and Marcel J. T. Reinders}, title = {Analysis of mass spectrometry data using sub-spectra}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S51}, doi = {10.1186/1471-2105-10-S1-S51}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/MeulemanEGWR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PapamichailP09, author = {Dimitrios P. Papamichail and Georgios P. Papamichail}, title = {Improved algorithms for approximate string matching (extended abstract)}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S10}, doi = {10.1186/1471-2105-10-S1-S10}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/PapamichailP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ParidaJMCBC09, author = {Laxmi Parida and Asif Javed and Marta Mel{\'{e}} and Francesc Calafell and Jaume Bertranpetit}, title = {Minimizing recombinations in consensus networks for phylogeographic studies}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S72}, doi = {10.1186/1471-2105-10-S1-S72}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ParidaJMCBC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ParkerW09, author = {Brian J. Parker and Jiayu Wen}, title = {Predicting microRNA targets in time-series microarray experiments via functional data analysis}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S32}, doi = {10.1186/1471-2105-10-S1-S32}, timestamp = {Fri, 17 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ParkerW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PhakthanakanokRKSWP09, author = {Krongsakda Phakthanakanok and Khanok Ratanakhanokchai and Khin Lay Kyu and Pornthep Sompornpisut and Aaron Watts and Surapong Pinitglang}, title = {A computational analysis of {SARS} cysteine proteinase-octapeptide substrate interaction: implication for structure and active site binding mechanism}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S48}, doi = {10.1186/1471-2105-10-S1-S48}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/PhakthanakanokRKSWP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PoolsapKA09, author = {Unyanee Poolsap and Yuki Kato and Tatsuya Akutsu}, title = {Prediction of {RNA} secondary structure with pseudoknots using integer programming}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S38}, doi = {10.1186/1471-2105-10-S1-S38}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/PoolsapKA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SongYYZDLCJ09, author = {Dandan Song and Yang Yang and Bin Yu and Binglian Zheng and Zhidong Deng and Bao{-}Liang Lu and Xuemei Chen and Tao Jiang}, title = {Computational prediction of novel non-coding RNAs in \emph{Arabidopsis thaliana}}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S36}, doi = {10.1186/1471-2105-10-S1-S36}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/SongYYZDLCJ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SunBSFDLVMM09, author = {Hong Sun and Tijl De Bie and Valerie Storms and Qiang Fu and Thomas Dhollander and Karen Lemmens and Annemieke Verstuyf and Bart De Moor and Kathleen Marchal}, title = {ModuleDigger: an itemset mining framework for the detection of \emph{cis}-regulatory modules}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S30}, doi = {10.1186/1471-2105-10-S1-S30}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/SunBSFDLVMM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SunH09, author = {Weitao Sun and Jing He}, title = {Reduction of the secondary structure topological space through direct estimation of the contact energy formed by the secondary structures}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S40}, doi = {10.1186/1471-2105-10-S1-S40}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SunH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SuzukiSKS09, author = {Taiji Suzuki and Masashi Sugiyama and Takafumi Kanamori and Jun Sese}, title = {Mutual information estimation reveals global associations between stimuli and biological processes}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S52}, doi = {10.1186/1471-2105-10-S1-S52}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SuzukiSKS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SwensonM09, author = {Krister M. Swenson and Bernard M. E. Moret}, title = {Inversion-based genomic signatures}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S7}, doi = {10.1186/1471-2105-10-S1-S7}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SwensonM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SwensonTTM09, author = {Krister M. Swenson and Yokuki To and Jijun Tang and Bernard M. E. Moret}, title = {Maximum independent sets of commuting and noninterfering inversions}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S6}, doi = {10.1186/1471-2105-10-S1-S6}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SwensonTTM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/TaiVKL09, author = {Chin{-}Hsien Tai and James J. Vincent and Changhoon Kim and Byungkook Lee}, title = {{SE:} an algorithm for deriving sequence alignment from a pair of superimposed structures}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S4}, doi = {10.1186/1471-2105-10-S1-S4}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/TaiVKL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/TeberLBFW09, author = {Erdahl T. Teber and Jason Y. Liu and Sara Ballouz and Diane Fatkin and Merridee A. Wouters}, title = {Comparison of automated candidate gene prediction systems using genes implicated in type 2 diabetes by genome-wide association studies}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S69}, doi = {10.1186/1471-2105-10-S1-S69}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/TeberLBFW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/TianWGF09, author = {Jian Tian and Ningfeng Wu and Jun Guo and Yunliu Fan}, title = {Prediction of amyloid fibril-forming segments based on a support vector machine}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S45}, doi = {10.1186/1471-2105-10-S1-S45}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/TianWGF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/TungL09, author = {Thai Quang Tung and Doheon Lee}, title = {A method to improve protein subcellular localization prediction by integrating various biological data sources}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S43}, doi = {10.1186/1471-2105-10-S1-S43}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/TungL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/VlietWR09, author = {Martin H. van Vliet and Lodewyk F. A. Wessels and Marcel J. T. Reinders}, title = {Knowledge driven decomposition of tumor expression profiles}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S20}, doi = {10.1186/1471-2105-10-S1-S20}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/VlietWR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WangGW09, author = {Jun Wang and Maozu Guo and Chun{-}yu Wang}, title = {{CGTS:} a site-clustering graph based tagSNP selection algorithm in genotype data}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S71}, doi = {10.1186/1471-2105-10-S1-S71}, timestamp = {Wed, 11 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WangGW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WangHZ09, author = {Hongning Wang and Minlie Huang and Xiaoyan Zhu}, title = {Extract interaction detection methods from the biological literature}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S55}, doi = {10.1186/1471-2105-10-S1-S55}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/WangHZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WangWLZQD09, author = {Quan Wang and Lin Wan and Dayong Li and Lihuang Zhu and Minping Qian and Minghua Deng}, title = {Searching for bidirectional promoters in \emph{Arabidopsis thaliana}}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S29}, doi = {10.1186/1471-2105-10-S1-S29}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WangWLZQD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WangZL09, author = {Wendi Wang and Peiheng Zhang and Xinchun Liu}, title = {Short read {DNA} fragment anchoring algorithm}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S17}, doi = {10.1186/1471-2105-10-S1-S17}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WangZL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WarrenS09a, author = {Robert Warren and David Sankoff}, title = {Genome aliquoting with double cut and join}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S2}, doi = {10.1186/1471-2105-10-S1-S2}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WarrenS09a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WonPLKL09, author = {Hong{-}Hee Won and Inho Park and Eunjung Lee and Jong{-}Won Kim and Doheon Lee}, title = {Comparative analysis of the {JAK/STAT} signaling through erythropoietin receptor and thrombopoietin receptor using a systems approach}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S53}, doi = {10.1186/1471-2105-10-S1-S53}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WonPLKL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/XiCCWW09, author = {Yanping Xi and Yi{-}Ping Phoebe Chen and Ming Cao and Weirong Wang and Fei Wang}, title = {Analysis on relationship between extreme pathways and correlated reaction sets}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S58}, doi = {10.1186/1471-2105-10-S1-S58}, timestamp = {Mon, 06 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/XiCCWW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/XiaDZYXZ09, author = {Fei Xia and Yong Dou and Xingming Zhou and Xuejun Yang and Jiaqing Xu and Yang Zhang}, title = {Fine-grained parallel RNAalifold algorithm for {RNA} secondary structure prediction on {FPGA}}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S37}, doi = {10.1186/1471-2105-10-S1-S37}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/XiaDZYXZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/XuHXYY09, author = {Qian Xu and Derek Hao Hu and Hong Xue and Weichuan Yu and Qiang Yang}, title = {Semi-supervised protein subcellular localization}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S47}, doi = {10.1186/1471-2105-10-S1-S47}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/XuHXYY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/XuSY09, author = {Zixiang Xu and Xiao Sun and Shihai Yu}, title = {Genome-scale analysis to the impact of gene deletion on the metabolism of \emph{E. coli}: constraint-based simulation approach}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S62}, doi = {10.1186/1471-2105-10-S1-S62}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/XuSY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YangWMLC09, author = {Fan Yang and Hua{-}zhen Wang and Hong Mi and Cheng{-}de Lin and Wei{-}wen Cai}, title = {Using random forest for reliable classification and cost-sensitive learning for medical diagnosis}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S22}, doi = {10.1186/1471-2105-10-S1-S22}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/YangWMLC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Yu09, author = {G. X. Yu}, title = {Pathogenic \emph{Bacillus anthracis }in the progressive gene losses and gains in adaptive evolution}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S3}, doi = {10.1186/1471-2105-10-S1-S3}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Yu09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/YueST09, author = {Feng Yue and Jian Shi and Jijun Tang}, title = {Simultaneous phylogeny reconstruction and multiple sequence alignment}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S11}, doi = {10.1186/1471-2105-10-S1-S11}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/YueST09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhangFS09, author = {Wensheng Zhang and Hong{-}Bin Fang and Jiuzhou Song}, title = {Principal component tests: applied to temporal gene expression data}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S26}, doi = {10.1186/1471-2105-10-S1-S26}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhangFS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhangO09, author = {Kelvin Xi Zhang and B. F. Francis Ouellette}, title = {{GAIA:} a gram-based interaction analysis tool - an approach for identifying interacting domains in yeast}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S60}, doi = {10.1186/1471-2105-10-S1-S60}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhangO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhangWZ09, author = {Michael Q. Zhang and Michael S. Waterman and Xuegong Zhang}, title = {The Seventh Asia Pacific Bioinformatics Conference {(APBC2009)}}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S1}, doi = {10.1186/1471-2105-10-S1-S1}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhangWZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhaoWDC09, author = {Liling Zhao and Jihua Wang and Xianghua Dou and Zanxia Cao}, title = {Studying the unfolding process of protein {G} and protein {L} under physical property space}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S44}, doi = {10.1186/1471-2105-10-S1-S44}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoWDC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhengHZQQZD09, author = {Hao Zheng and Xingyi Hang and Ji Zhu and Minping Qian and Wubin Qu and Chenggang Zhang and Minghua Deng}, title = {{REMAS:} a new regression model to identify alternative splicing events from exon array data}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S18}, doi = {10.1186/1471-2105-10-S1-S18}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhengHZQQZD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Zhu09, author = {Dongxiao Zhu}, title = {Semi-supervised gene shaving method for predicting low variation biological pathways from genome-wide data}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S54}, doi = {10.1186/1471-2105-10-S1-S54}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/Zhu09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhuSP09, author = {Yanni Zhu and Xiaotong Shen and Wei Pan}, title = {Network-based support vector machine for classification of microarray samples}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S21}, doi = {10.1186/1471-2105-10-S1-S21}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhuSP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZouWDP09, author = {An{-}Min Zou and Fang{-}Xiang Wu and Jiarui Ding and Guy G. Poirier}, title = {Quality assessment of tandem mass spectra using support vector machine {(SVM)}}, journal = {{BMC} Bioinform.}, volume = {10}, number = {{S-1}}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-S1-S49}, doi = {10.1186/1471-2105-10-S1-S49}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/ZouWDP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/AbouelhodaGBS08, author = {Mohamed Ibrahim Abouelhoda and Robert Giegerich and Behshad Behzadi and Jean{-}Marc Steyaert}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Alignment of Minisatellite Maps: {A} Minimum Spanning Tree-based Approach}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {261--272}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc080a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/AbouelhodaGBS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/AliotoGPP08, author = {Tyler S. Alioto and Roderic Guig{\'{o}} and Ernesto Picardi and Graziano Pesole}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {GenePC and {ASPIC} Integrate Gene Predictions with Expressed Sequence Alignments To Predict Alternative Transcripts}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {363--372}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc038a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/AliotoGPP08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/AssfalgGKPWZ08, author = {Johannes A{\ss}falg and Jing Gong and Hans{-}Peter Kriegel and Alexey Pryakhin and Tiandi Wei and Arthur Zimek}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Supervised Ensembles of Prediction Methods for Subcellular Localization}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {29--38}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc044a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/AssfalgGKPWZ08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BockerBBT08, author = {Sebastian B{\"{o}}cker and Sebastian Briesemeister and Quang Bao Anh Bui and Anke Tru{\ss}}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {A Fixed-Parameter Approach for Weighted Cluster Editing}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {211--220}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc050a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/BockerBBT08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Boden08, author = {Mikael Bod{\'{e}}n}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Predicting Nucleolar Proteins Using Support-Vector Machines}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {19--28}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc066a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Boden08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BrazmaMA08, author = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Preface}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc08preface.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/BrazmaMA08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChenFSYZZ08, author = {Zhixiang Chen and Bin Fu and Robert T. Schweller and Boting Yang and Zhiyu Zhao and Binhai Zhu}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Linear Time Probabilistic Algorithms for the Singular Haplotype Reconstruction Problem from {SNP} Fragments}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {333--342}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc028a.pdf}, timestamp = {Wed, 04 May 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/ChenFSYZZ08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChinLSY08, author = {Francis Y. L. Chin and Henry C. M. Leung and Man{-}Hung Siu and Siu{-}Ming Yiu}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Optimal Algorithm for Finding {DNA} Motifs with Nucleotide Adjacent Dependency}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {343--352}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc064a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChinLSY08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DasGuptaJM08, author = {Bhaskar DasGupta and Jin Jun and Ion I. Mandoiu}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Primer Selection Methods for Detection of Genomic Inversions and Deletions via {PAMP}}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {353--362}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc086a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/DasGuptaJM08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DavisNKHR08, author = {Melissa J. Davis and Andrew F. Newman and Imran Khan and Jane Hunter and Mark A. Ragan}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Integrating Hierarchical Controlled Vocabularies With {OWL} Ontology: {A} Case Study from the Domain of Molecular Interactions}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {145--154}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc024a.pdf}, timestamp = {Tue, 27 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/DavisNKHR08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Dress08, author = {Andreas W. M. Dress}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Recent Progress in Phylogenetic Combinatorics}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {1--4}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/keynote001.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Dress08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HaudryOEBLKWWGGABBFWH08, author = {Yannick Haudry and Chuang Kee Ong and Laurence Ettwiller and Hugo B{\'{e}}rub{\'{e}} and Ivica Letunic and Misha Kapushesky and Paul{-}Daniel Weeber and Xi Wang and Julien Gagneur and Charles Girardot and Detlev Arendt and Peer Bork and Alvis Brazma and Eileen E. M. Furlong and Joachim Wittbrodt and Thorsten Henrich}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Comparing and Analysing Gene Expression Patterns Across Animal Species Using 4DXpress}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {373--382}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc035a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/HaudryOEBLKWWGGABBFWH08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HayashidaA08, author = {Morihiro Hayashida and Tatsuya Akutsu}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Image Compression-based Approach to Measuring the Similarity of Protein Structures}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {221--230}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc055a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/HayashidaA08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Kanehisa08, author = {Minoru Kanehisa}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {{KEGG} for Medical and Pharmaceutical Applications}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {5}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/keynote002.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Kanehisa08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KhodabakhshiMRG08, author = {Alireza Hadj Khodabakhshi and J{\'{a}}n Manuch and Arash Rafiey and Arvind Gupta}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Structure-Approximating Design of Stable Proteins in 2D {HP} Model Fortified by Cysteine Monomers}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {49--58}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc110a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/KhodabakhshiMRG08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KimOOT08, author = {Jin{-}Dong Kim and Tomoko Ohta and Kanae Oda and Jun'ichi Tsujii}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {From Text to Pathway: Corpus Annotation for Knowledge Acquisition from Biomedical Literature}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {165--176}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc104a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/KimOOT08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KonovalovH08, author = {Dmitry A. Konovalov and Dik Heg}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Estimation of Population Allele Frequencies from Small Samples Containing Multiple Generations}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {321--332}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc013a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/KonovalovH08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KucukuralSE08, author = {Alper K{\"{u}}{\c{c}}{\"{u}}kural and Osman Ugur Sezerman and Ayt{\"{u}}l Er{\c{c}}il}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Discrimination of Native Folds Using Network Properties of Protein Structures}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {59--68}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc034a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/KucukuralSE08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LangmeadJ08, author = {Christopher James Langmead and Sumit Kumar Jha}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Symbolic Approaches for Finding Control Strategies in Boolean Networks}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {307--320}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc051a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/LangmeadJ08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LiELM08, author = {Juntao Li and Majid Eshaghi and Jianhua Liu and Karuturi R. Krishna Murthy}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Near-sigmoid Modeling to Simultaneously Profile Genome-wide {DNA} Replication Timing and Efficiency in Single {DNA} Replication Microarray Studies}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {383--392}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc077a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/LiELM08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LiL08, author = {Yuan{-}Peng Li and Bao{-}Liang Lu}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Semantic Similarity Definition over Gene Ontology by Further Mining of the Information Content}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {155--164}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc084a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/LiL08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LiRGR08, author = {Yunlei Li and Dick de Ridder and Marco J. L. de Groot and Marcel J. T. Reinders}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Metabolic Pathway Alignment (M-Pal) Reveals Diversity and Alternatives in Conserved Networks}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {273--286}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc040a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/LiRGR08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LukmanSLC08, author = {Suryani Lukman and Kelvin Sim and Jinyan Li and Yi{-}Ping Phoebe Chen}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Interacting Amino Acid Preferences of 3D Pattern Pairs at the Binding Sites of Transient and Obligate Protein Complexes}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {69--78}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc026a.pdf}, timestamp = {Wed, 07 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/LukmanSLC08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/MaY08, author = {Bin Ma and Hongyi Yao}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Seed Optimization Is No Easier than Optimal Golomb Ruler Design}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {133--144}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc019a.pdf}, timestamp = {Mon, 13 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/MaY08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/NakatoG08, author = {Ryuichiro Nakato and Osamu Gotoh}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {A Novel Method for Reducing Computational Complexity of Whole Genome Sequence Alignment}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {101--110}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc059a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/NakatoG08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/RangwalaK08, author = {Huzefa Rangwala and George Karypis}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {fRMSDAlign: Protein Sequence Alignment Using Predicted Local Structure Information for Pairs with Low Sequence Identity}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {111--122}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc011a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/RangwalaK08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SanderDZLS08, author = {Oliver Sander and Francisco S. Domingues and Hongbo Zhu and Thomas Lengauer and Ingolf Sommer}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Structural Descriptors of Protein-Protein Binding Sites}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {79--88}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc012a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/SanderDZLS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SmalterHL08, author = {Aaron M. Smalter and Jun Huan and Gerald H. Lushington}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Chemical Compound Classification with Automatically Mined Structure Patterns}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {39--48}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc107a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/SmalterHL08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SwensonATM08, author = {Krister M. Swenson and William Arndt and Jijun Tang and Bernard M. E. Moret}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Phylogenetic Reconstruction from Complete Gene Orders of Whole Genomes}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {241--250}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc093a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/SwensonATM08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/TadepalliRWMH08, author = {Satish Tadepalli and Naren Ramakrishnan and Layne T. Watson and Bhubaneswar Mishra and Richard F. Helm}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Simultaneously Segmenting Multiple Gene Expression Time Courses by Analyzing Cluster Dynamics}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {297--306}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc031a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/TadepalliRWMH08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ThanN08, author = {Cuong Than and Luay Nakhleh}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {SPR-based Tree Reconciliation: Non-binary Trees and Multiple Solutions}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {251--260}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc097a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ThanN08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/TsengWGBR08, author = {Huei{-}Hun Elizabeth Tseng and Zasha Weinberg and Jeremy Gore and Ronald R. Breaker and Walter L. Ruzzo}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Finding Non-coding RNAs Through Genome-Scale Clustering}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {199--210}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc018a.pdf}, timestamp = {Tue, 26 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/TsengWGBR08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Valencia08, author = {Alfonso Valencia}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Protein Interactions Extracted from Genomes and Papers}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {7}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/keynote003.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Valencia08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WarrenS08, author = {Robert Warren and David Sankoff}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Genome Halving with Double Cut and Join}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {231--240}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc057a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/WarrenS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WenPW08, author = {Jiayu Wen and Brian J. Parker and Georg F. Weiller}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Analysis of Structural Strand Asymmetry in Non-coding RNAs}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {187--198}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc091a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/WenPW08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WongCLY08, author = {Thomas K. F. Wong and Y. S. Chiu and Tak Wah Lam and Siu{-}Ming Yiu}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {A Memory Efficient Algorithm for Structural Alignment of RNAs with Embedded Simple Pseudoknots}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {89--100}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc105a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/WongCLY08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/YangL08, author = {Wen{-}Yun Yang and Bao{-}Liang Lu}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {String Kernels with Feature Selection for {SVM} Protein Classification}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {9--18}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc068a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/YangL08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/YangLY08, author = {Yang Yang and Bao{-}Liang Lu and Wen{-}Yun Yang}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Classification of Protein Sequences Based on Word Segmentation Methods}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {177--186}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc065a.pdf}, timestamp = {Tue, 17 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/YangLY08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/YangZ08, author = {Jialiang Yang and Louxin Zhang}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Run Probability of High-Order Seed Patterns and its Applications to Finding Good Transition Seeds}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {123--132}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc056a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/YangZ08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ZhaoWCA08, author = {Xing{-}Ming Zhao and Rui{-}Sheng Wang and Luonan Chen and Kazuyuki Aihara}, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Automatic Modeling of Signal Pathways from Protein-Protein Interaction Networks}, booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, pages = {287--296}, publisher = {Imperial College Press}, year = {2008}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc101a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ZhaoWCA08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/apbc/2008, editor = {Alvis Brazma and Satoru Miyano and Tatsuya Akutsu}, title = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC} 2008, 14-17 January 2008, Kyoto, Japan}, series = {Advances in Bioinformatics and Computational Biology}, volume = {6}, publisher = {Imperial College Press}, year = {2008}, isbn = {978-1-84816-108-5}, timestamp = {Mon, 15 Sep 2008 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/2008.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/AkutsuF07, author = {Tatsuya Akutsu and Daiji Fukagawa}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Inferring a Chemical Structure from a Feature Vector Based on Frequency of Labeled Paths and Small Fragments}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {165--174}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc118a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/AkutsuF07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BelcaidBCCGPV07, author = {Mahdi Belcaid and Anne Bergeron and Annie Chateau and C{\'{e}}dric Chauve and Yannick Gingras and Guylaine Poisson and M. Vendette}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Exploring Genome Rearrangements using Virtual Hybridization}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {205--214}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc217a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/BelcaidBCCGPV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/CaiGSSXL07, author = {Zhipeng Cai and Randy Goebel and Mohammad R. Salavatipour and Yi Shi and Lizhe Xu and Guohui Lin}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Selecting Genes with Dissimilar Discrimination Strength for Sample Class Prediction}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {81--90}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc133a.pdf}, timestamp = {Thu, 12 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/CaiGSSXL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChengC07, author = {Betty Yee Man Cheng and Jaime G. Carbonell}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Combining N-grams and Alignment in G-protein Coupling Specificity Prediction}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {363--372}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc212a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChengC07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChoiHLPLD07, author = {V. Choi and Y. Huang and Vy Lam and D. Potter and Reinhard C. Laubenbacher and Karen Duca}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Using Formal Concept Analysis for Microarray Data Comparison}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {57--66}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc163a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChoiHLPLD07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/CominP07, author = {Matteo Comin and Laxmi Parida}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Subtle Motif Discovery for Detection of {DNA} Regulatory Sites}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {27--36}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc122a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/CominP07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DingHZ07, author = {Shilin Ding and Minlie Huang and Xiaoyan Zhu}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Semi-supervised Pattern Learning for Extracting Relations from Bioscience Texts}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {307--316}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc198a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/DingHZ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/EastonIHM07, author = {B. C. Easton and A. V. Isaev and Gavin A. Huttley and Peter Maxwell}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {A Probabilistic Method to Identify Compensatory Substitutions for Pathogenic Mutations}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {195--204}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc141a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/EastonIHM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/FuBBCY07, author = {Qi Fu and Elizabeth Bent and James Borneman and Marek Chrobak and Neal E. Young}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Algorithmic Approaches to Selecting Control Clones in {DNA} Array Hybridization Experiments}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {17--26}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc124a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/FuBBCY07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/FuJ07, author = {Zheng Fu and Tao Jiang}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Computing the Breakpoint Distance between Partially Ordered Genomes}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {237--246}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc184a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/FuJ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Graves07, author = {Jennifer A. Marshall Graves}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Exploring Genomes of Distantly Related Mammals}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {1}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbckey1a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Graves07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HayashidaAN07, author = {Morihiro Hayashida and Tatsuya Akutsu and Hiroshi Nagamochi}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {A Novel Clustering Method for Analysis of Biological Networks using Maximal Components of Graphs}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {257--266}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc119a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/HayashidaAN07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HuangJK07, author = {Gaofeng Huang and Peter Jeavons and Dominic Kwiatkowski}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Exact and Heuristic Approaches for Identifying Disease-Associated {SNP} Motifs}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {175--184}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc172a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/HuangJK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HuffnerWZ07, author = {Falk H{\"{u}}ffner and Sebastian Wernicke and Thomas Zichner}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Algorithm Engineering for Color-Coding to Facilitate Signaling Pathway Detection}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {277--286}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc160a.pdf}, timestamp = {Sun, 20 Nov 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/HuffnerWZ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HusonAJS07, author = {Daniel H. Huson and Alexander F. Auch and Qi Ji and Stephan C. Schuster}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {etagenome Analysis using Megan}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {7--16}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc108a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/HusonAJS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/JiangXZ07, author = {Minghui Jiang and Ying Xu and Binhai Zhu}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Protein Structure-Structure Alignment with Discrete Fr'echet Distance}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {131--141}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc162a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/JiangXZ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LuHS07, author = {Yonggang Lu and Jing He and Charlie E. M. Strauss}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Deriving Protein Structure Topology from the Helix Skeletion in Low Resolution Density Map using Rosetta}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {143--151}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc193a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/LuHS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/MadeiraO07, author = {Sara C. Madeira and Arlindo L. Oliveira}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {An Efficient Biclustering Algorithm for Finding Genes with Similar Patterns in Time-series Expression Data}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {67--80}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc221a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/MadeiraO07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/MakB07, author = {Denise Y. F. Mak and Gary Benson}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {All Hits All The Time: Parameter Free Calculation of Seed Sensitivity}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {327--340}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc136a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/MakB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ManuchG07, author = {J{\'{a}}n Manuch and Daya Ram Gaur}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Fitting Protein Chains to Cubic Lattice is NP-Complete}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {153--164}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc226a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ManuchG07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Nadeau07, author = {Joseph H. Nadeau}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Bugs, Guts and Fat - {A} Systems Approach to the Metabolic 'Axis of Evil'}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {3}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbckey2a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Nadeau07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/NingCL07, author = {Kang Ning and Ket Fah Chong and Hon Wai Leong}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {De Novo Peptide Sequencing for Mass Spectra Based on Multi-Charge Strong Tags}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {287--296}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc105a.pdf}, timestamp = {Fri, 03 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/NingCL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/OkadaAA07, author = {Kinya Okada and Kiyoshi Asai and Masanori Arita}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Flow Model of the Protein-protein Interaction Network for Finding Credible Interactions}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {317--326}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc210a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/OkadaAA07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ParkGR07, author = {Sung{-}Hee Park and David R. Gilbert and Keun Ho Ryu}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Fast Structural Similarity Search Based on Topology String Matching}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {341--351}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc153a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ParkGR07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Pevzner07, author = {Pavel A. Pevzner}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Protein Identification via Spectral Networks Analysis}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {5}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbckey3a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Pevzner07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/RaghupathyHD07, author = {Narayanan Raghupathy and Rose Hoberman and Dannie Durand}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Two Plus Two Does not Equal Three: Statistical Tests for Multiple Genome Comparison}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {215--225}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc223a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/RaghupathyHD07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SankoffWC07, author = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Preface}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/preface-version8.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/SankoffWC07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ShanMZL07, author = {Baozhen Shan and Bin Ma and Kaizhong Zhang and Gilles A. Lajoie}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Complexities and Algorithms for Glycan Structure Sequencing using Tandem Mass Spectrometry}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {297--306}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc164a.pdf}, timestamp = {Mon, 13 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ShanMZL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/StissingMPBF07, author = {Martin Stig Stissing and Thomas Mailund and Christian N. S. Pedersen and Gerth St{\o}lting Brodal and Rolf Fagerberg}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Computing the All-Pairs Quartet Distance on a Set of Evolutionary Trees}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {91--100}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc145a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/StissingMPBF07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/StissingPMBF07, author = {Martin Stig Stissing and Christian N. S. Pedersen and Thomas Mailund and Gerth St{\o}lting Brodal and Rolf Fagerberg}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Computing the Quartet Distance Between Evolutionary Trees of Bounded Degree}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {101--110}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc146a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/StissingPMBF07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SuhL07, author = {Young Ju Suh and Wentian Li}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Genotype-Based Case-Control Analysis, Violation of Hardy-Weinberg Equilibrium, and Phase Diagrams}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {185--194}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc181a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/SuhL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SulW07, author = {Seung{-}Jin Sul and Tiffani L. Williams}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {A Randomized Algorithm for Comparing Sets of Phylogenetic Trees}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {121--130}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc224a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/SulW07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SupperFSDZ07, author = {Jochen Supper and Holger Fr{\"{o}}hlich and Christian Spieth and Andreas Dr{\"{a}}ger and Andreas Zell}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Inferring Gene Regulatory Networks by Machine Learning Methods}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {247--256}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc113a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/SupperFSDZ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SupperFZ07, author = {Jochen Supper and Holger Fr{\"{o}}hlich and Andreas Zell}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Gene Regulatory Network Inference via Regression Based Topological Refinement}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {267--276}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc127a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/SupperFZ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WangZTCWZB07, author = {Pinghao Wang and Bing Bing Zhou and Monther Tarawneh and Daniel Chu and Chen Wang and Albert Y. Zomaya and Richard P. Brent}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {A Global Maximum Likelihood Super-Quartet Phylogeny Method}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {111--120}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc233a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/WangZTCWZB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WernickeR07, author = {Sebastian Wernicke and Florian Rasche}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Simple and Fast Alignment of Metabolic Pathways by Exploiting Local Diversity}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {353--362}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc150a.pdf}, timestamp = {Sun, 20 Nov 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/WernickeR07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/XieWLY07, author = {Xudong Xie and Shuanhu Wu and Kin{-}Man Lam and Hong Yan}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {An Effective Promoter Detection Method using the Adaboost Algorithm}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {37--46}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc112a.pdf}, timestamp = {Wed, 16 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/XieWLY07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Xu07, author = {Wei Xu}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {The Distance Between Randomly Constructed Genomes}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {227--236}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc138a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Xu07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ZhaoLY07, author = {Hongya Zhao and Alan Wee{-}Chung Liew and Hong Yan}, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {A New Strategy of Geometrical Biclustering for Microarray Data Analysis}, booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, pages = {47--56}, publisher = {Imperial College Press}, year = {2007}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc121a.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ZhaoLY07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/apbc/2007, editor = {David Sankoff and Lusheng Wang and Francis Y. L. Chin}, title = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC} 2007, 15-17 January 2007, Hong Kong, China}, series = {Advances in Bioinformatics and Computational Biology}, volume = {5}, publisher = {Imperial College Press}, year = {2007}, isbn = {978-1-86094-783-4}, timestamp = {Sun, 21 Oct 2012 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/2007.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/AkutsuHCN06, author = {Tatsuya Akutsu and Morihiro Hayashida and Wai{-}Ki Ching and Michael K. Ng}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {On the Complexity of Finding Control Strategies for Boolean Networks}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {99--108}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/155.pdf}, timestamp = {Wed, 03 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/AkutsuHCN06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Arauzo-BravoFKS06, author = {Marcos J. Ara{\'{u}}zo{-}Bravo and Satoshi Fujii and Hidetoshi Kono and Akinori Sarai}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Disentangling the Role of Tetranucleotide in the Sequence-Dependence of {DNA} Conformation: {A} Molecular Dynamics Approach}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {227--236}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/213.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Arauzo-BravoFKS06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ArunL06, author = {K. Arun and Christopher James Langmead}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Structure-Based Chemical Shift Prediction Using Random Forests Non-Linear Regression}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {317--326}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/238.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ArunL06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/AssfalgKKKPR06, author = {Johannes A{\ss}falg and Hans{-}Peter Kriegel and Peer Kr{\"{o}}ger and Peter Kunath and Alexey Pryakhin and Matthias Renz}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Semi-Supervised Threshold Queries on Pharmacogenomics Time Sequences}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {307--316}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/237.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/AssfalgKKKPR06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/CaiHL06, author = {Zhipeng Cai and Maysam Heydari and Guohui Lin}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Microarray Missing Value Imputation by Iterated Local Least Squares}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {159--168}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/188.pdf}, timestamp = {Wed, 30 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/CaiHL06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChanLY06, author = {P. Y. Chan and Tak Wah Lam and Siu{-}Ming Yiu}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A More Accurate and Efficient Whole Genome Phylogeny}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {337--352}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/248.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChanLY06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChenC06, author = {Yi{-}Ping Phoebe Chen and Qingfeng Chen}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Analyzing Inconsistency Toward Enhancing Integration of Biological Molecular Databases}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {197--206}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/204.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChenC06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChenLWSH06, author = {Ching{-}Tai Chen and Hsin{-}Nan Lin and Kuen{-}Pin Wu and Ting{-}Yi Sung and Wen{-}Lian Hsu}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A Knowledge-Based Approach to Protein Local Structure Prediction}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {257--266}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/217.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChenLWSH06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChiS06, author = {Pin{-}Hao Chi and Chi{-}Ren Shyu}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Predicting Ranked {SCOP} Domains by Mining Associations of Visual Contents in Distance Matrices}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {49--58}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/145.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChiS06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChinL06, author = {Francis Y. L. Chin and Henry C. M. Leung}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {An Efficient Algorithm for String Motif Discovery}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {79--88}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/153.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChinL06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChongNLP06, author = {Ket Fah Chong and Kang Ning and Hon Wai Leong and Pavel A. Pevzner}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Characterization of Multi-Charge Mass Spectra for Peptide Sequencing}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {109--119}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/162.pdf}, timestamp = {Fri, 03 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/ChongNLP06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DasPD06, author = {Sabyasachi Das and Sandip Paul and Chitra Dutta}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Trends in Codon and Amino Acid Usage in Human Pathogen Tropheryma Whipplei, the only Known Actinobacteria with Reduced Genome}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {139--148}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/178.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/DasPD06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Han06, author = {Xiaoxu Han}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Resolving the Gene Tree and Species Tree Problem by Phylogenetic Mining}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {287--296}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/235.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Han06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HortonPON06, author = {Paul Horton and Keun{-}Joon Park and Takeshi Obayashi and Kenta Nakai}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Protein Subcellular Localisation Prediction with WoLF {PSORT}}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {39--48}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/138.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/HortonPON06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HuangFAPSMW06, author = {Shao{-}Shan Huang and Debra L. Fulton and David J. Arenillas and Paul Perco and Shannan J. Ho Sui and James R. Mortimer and Wyeth W. Wasserman}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Identification of Over-Represented Combinations of Transcription Factor Binding Sites in Sets of Co-Expressed Genes}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {247--256}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/216.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/HuangFAPSMW06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HuangZDYL06, author = {Minlie Huang and Xiaoyan Zhu and Shilin Ding and Hao Yu and Ming Li}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {{ONBRIRES:} Ontology-Based Biological Relation Extraction System}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {327--336}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/246.pdf}, timestamp = {Tue, 06 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/HuangZDYL06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/JiangYCW06, author = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Preface}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/preface.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/JiangYCW06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/JinKCC06, author = {Hee{-}Jeong Jin and Hye{-}Jung Kim and Jeong{-}Hyeon Choi and Hwan{-}Gue Cho}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {AlignScope: {A} Visual Mining Tool for Gene Team Finding with Whole Genome Alignment}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {69--78}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/150.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/JinKCC06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KawadaS06, author = {Yuji Kawada and Yasubumi Sakakibara}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Discriminative Detection of Cis-Acting Regulatory Variation From Location Data}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {89--98}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/154.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/KawadaS06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Konovalov06, author = {Dmitry A. Konovalov}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Accuracy of Four Heuristics for the Full Sibship Reconstruction Problem in the Presence of Genotype Errors}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {7--16}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/113.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Konovalov06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Langmead06, author = {Christopher James Langmead}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A Randomized Algorithm for Learning Mahalanobis Metrics: Application to Classification and Regression of Biological Data}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {217--226}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/209.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Langmead06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Li06, author = {Wen{-}Hsiung Li}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {On the Inference of Regulatory Elements, Circuits, and Modules}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {1}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/wenhsiung.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Li06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LiCC06, author = {C. W. Li and W. C. Chang and B. S. Chen}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {System Identification and Robustness Analysis of the Circadian Regulatory Network via Microarray Data in Arabidopsis Thaliana}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {27--37}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/127.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/LiCC06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/MaC06, author = {Patrick C. H. Ma and Keith C. C. Chan}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Inference of Gene Regulatory Networks from Microarray Data: {A} Fuzzy Logic Approach}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {17--26}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/125.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/MaC06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/MaWLZ06, author = {Yifei Ma and Guoren Wang and Yongguang Li and Yuhai Zhao}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {{EDAM:} An Efficient Clique Discovery Algorithm with Frequency Transformation for Finding Motifs}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {119--128}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/165.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/MaWLZ06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ManuchZSG06, author = {J{\'{a}}n Manuch and Xiaohong Zhao and Ladislav Stacho and Arvind Gupta}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Characterization of the Existence of Galled-Tree Networks}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {297--306}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/236.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ManuchZSG06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Ng06, author = {Michael K. Ng}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A Recursive Method for Solving Haplotype Frequencies in Multiple Loci Linkage Analysis}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {129--138}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/168.pdf}, timestamp = {Wed, 03 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/Ng06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/PanW06, author = {De Pan and Fei Wang}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Gene Expression Data Clustering Based on Local Similarity Combination}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {353--362}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/249.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/PanW06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/PaulDD06, author = {Sandip Paul and Sabyasachi Das and Chitra Dutta}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Consequences of Mutation, Selection, and Physico-Chemical Properties of Encoded Proteins on Synonymous Codon Usage in Adenoviruses}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {149--158}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/182.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/PaulDD06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Ragan06, author = {Mark A. Ragan}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Automating the Search for Lateral Gene Transfer}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {3}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/ragan.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Ragan06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/RuthsN06, author = {Derek A. Ruths and Luay Nakhleh}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {{RECOMP:} {A} Parsimony-Based Method for Detecting Recombination}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {59--68}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/146.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/RuthsN06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/RuthsN06a, author = {Derek A. Ruths and Luay Nakhleh}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Techniques for Assessing Phylogenetic Branch Support: {A} Performance Study}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {187--196}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/197.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/RuthsN06a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ShashikanthSMU06, author = {M. Shashikanth and A. Snethalatharani and S. K. Mubarak and K. Ulaganathan}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Genome Wide Computational Analysis of Small Nuclear {RNA} Genes for Oryza Sativa (Indica and Japonica)}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {277--286}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/231.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ShashikanthSMU06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ShenT06, author = {Li Shen and Eng Chong Tan}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A Generalized Output-Coding Scheme with {SVM} for Multiclass Microarray Classification}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {179--186}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/192.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ShenT06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Sinoquet06, author = {Christine Sinoquet}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A Novel Approach for Structured Consensus Motif Inference Under Specificity and Quorum Constraints}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {207--216}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/207.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Sinoquet06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ThorvaldsenYF06, author = {Steinar Thorvaldsen and Elinor Ytterstad and Tor Fl{\aa}}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Property-Dependent Analysis of Aligned Proteins from Two Or More Populations}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {169--178}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/189.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ThorvaldsenYF06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Waterman06, author = {Michael S. Waterman}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Whole Genome Optical Mapping}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {5}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/waterman.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Waterman06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/XieH06, author = {Zhong{-}Ru Xie and Ming{-}Jing Hwang}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A New Neural Network for B-Turn Prediction: the Effect of Site-Specific Amino Acid Preference}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {237--246}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/215.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/XieH06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/YangHLW06, author = {Liang Huai Yang and Wynne Hsu and Mong{-}Li Lee and Limsoon Wong}, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Identification of MicroRNA Precursors via {SVM}}, booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, pages = {267--276}, publisher = {Imperial College Press, London}, year = {2006}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/230.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/YangHLW06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/apbc/2006, editor = {Tao Jiang and Ueng{-}Cheng Yang and Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan}, publisher = {Imperial College Press, London}, year = {2006}, isbn = {1-86094-623-2}, timestamp = {Wed, 15 Mar 2006 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/2006.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BahadurTSHA05, author = {Dukka Bahadur and Etsuji Tomita and Jun'ichi Suzuki and Katsuhisa Horimoto and Tatsuya Akutsu}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Clique-based algorithms for protein threading with profiles and constraints}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {51--64}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/146.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/BahadurTSHA05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BodenH05, author = {Mikael Bod{\'{e}}n and John Hawkins}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Detecting residues in targeting peptides}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {131--140}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/195.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/BodenH05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BondugulaDX05, author = {Rajkumar Bondugula and Ognen Duzlevski and Dong Xu}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Profiles and fuzzy K-nearest neighbor algorithm for protein secondary structure prediction}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {85--94}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/216.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/BondugulaDX05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BulterWWZ05, author = {Greg Butler and Guang Wang and Yue Wang and Liqian Zou}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A graph database with visual queries for genomics}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {31--40}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/107.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/BulterWWZ05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/CarvalhoFOS05, author = {Alexandra M. Carvalho and Ana T. Freitas and Arlindo L. Oliveira and Marie{-}France Sagot}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A highly scalable algorithm for the extraction of CIS-regulatory regions}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {273--282}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/188.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/CarvalhoFOS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChangFCPSW05, author = {Hao{-}Teng Chang and Tan{-}Chi Fan and Margaret Dah{-}Tsyr Chang and Tun{-}Wen Pai and Bo{-}Han Su and Pei{-}Chih Wu}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Unique peptide prediction of RNase family sequences based on reinforced merging algorithms}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {289--298}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/142.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChangFCPSW05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChenW05, author = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Preface}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/preface.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChenW05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChenZFNZLJ05, author = {Xin Chen and Jie Zheng and Zheng Fu and Peng Nan and Yang Zhong and Stefano Lonardi and Tao Jiang}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Computing the Assignment of Orthologous Genes via Genome Rearrangement}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {363--378}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/taojiang.pdf}, timestamp = {Wed, 22 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChenZFNZLJ05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChinL05, author = {Francis Y. L. Chin and Henry C. M. Leung}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Voting algorithms for discovering long motifs}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {261--271}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/212.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChinL05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChowdharyAB05, author = {Rajesh Chowdhary and R. Ayesha Ali and Vladimir B. Bajic}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Modeling 5' regions of histone genes using Bayesian networks}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {283--288}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/138.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChowdharyAB05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChuaS05, author = {Hon Nian Chua and Wing{-}Kin Sung}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A better gap penalty for pairwise {SVM}}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {11--20}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/118.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ChuaS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DuanR05, author = {Kaibo Duan and Jagath C. Rajapakse}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {{SVM-RFE} peak selection for cancer classification with mass spectrometry data}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {191--200}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/184.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/DuanR05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/FengPZ05, author = {J. Feng and Laxmi Parida and Ruhong Zhou}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Protein folding trajectory analysis using patterned clusters}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {95--104}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/111.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/FengPZ05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/GuoLS05, author = {Jian Guo and Yuanlie Lin and Zhirong Sun}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A novel method for protein subcellular localization: Combining residue-couple model and {SVM}}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {117--129}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/116.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/GuoLS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HeHJS05, author = {Ying{-}Jun He and Trinh N. D. Huynh and Jesper Jansson and Wing{-}Kin Sung}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Inferring phylogenetic relationships avoiding forbidden rooted triplets}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {339--348}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/173.pdf}, timestamp = {Tue, 17 May 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/HeHJS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HuangD05, author = {Lei Huang and Yang Dai}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A support vector machine approach for prediction of {T} Cell epitopes}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {319--328}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/209.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/HuangD05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HuangZ05, author = {Zi Huang and Xiaofang Zhou}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {High dimensional indexing for protein structure matching using bowties}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {21--30}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/204.pdf}, timestamp = {Wed, 13 Jul 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/HuangZ05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KonwarMRS05, author = {Kishori M. Konwar and Ion I. Mandoiu and Alexander Russell and Alexander A. Shvartsman}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Improved algorithms for multiplex {PCR} primer set selection with amplification length constraints}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {41--50}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/151.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/KonwarMRS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Liang05, author = {Kung{-}Hao Liang}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Cells In Silico {(CIS):} {A} biomedical simulation framework based on Markov random field}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {151--160}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/196.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Liang05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LinHCCHK05, author = {Feng{-}Mao Lin and Hsien{-}Da Huang and Yu{-}Chung Chang and Pak{-}Leong Chan and Jorng{-}Tzong Horng and Ming{-}Tat Ko}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A database to aid probe design for virus identification}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {309--318}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/180.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/LinHCCHK05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LinLCLC05, author = {Tsun{-}Chen Lin and Ru{-}Sheng Liu and Shu{-}Yuan Chen and Chen{-}Chung Liu and Chien{-}Yu Chen}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Genetic algorithms and silhouette measures applied to microarray data classification}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {229--238}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/248.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/LinLCLC05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LiuML05, author = {Jian Liu and Bin Ma and Ming Li}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {{PRIME:} Peptide robust identification from {MS/MS} spectra}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {181--190}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/120.pdf}, timestamp = {Mon, 13 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/LiuML05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/MaetschkeTB05, author = {Stefan Maetschke and Michael Towsey and Mikael Bod{\'{e}}n}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {{BLOMAP:} An encoding of amino acids which improves signal peptide cleavage site prediction}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {141--150}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/123.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/MaetschkeTB05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/MatsunoIOFM05, author = {Hiroshi Matsuno and Shin{-}Ichi T. Inouye and Yasuki Okitsu and Yasushi Fujii and Satoru Miyano}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {A new regulatory interaction suggested by simulations for circadian genetic control mechanism in mammals}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {171--180}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/203.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/MatsunoIOFM05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Mishra05, author = {Santosh K. Mishra}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Trends in bioinformatics research and Singapore's role}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {381}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/santosh.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Mishra05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Nakamura05, author = {Haruki Nakamura}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Protein informatics towards integration of data grid and computing grid}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {359--362}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/nakamura.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/Nakamura05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/PapamichailSLM05, author = {Dimitris Papamichail and Steven Skiena and C. Van Der Lelie and S. R. McCorkle}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Bacterial population assay via k-mer analysis}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {299--308}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/130.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/PapamichailSLM05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/RajasekaranBH05, author = {Sanguthevar Rajasekaran and Sudha Balla and Chun{-}Hsi Huang}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Exact algorithms for planted motif challenge problems}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {249--259}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/126.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/RajasekaranBH05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/RajasekaranBHTGMS05, author = {Sanguthevar Rajasekaran and Sudha Balla and Chun{-}Hsi Huang and Vishal Thapar and Michael R. Gryk and Mark W. Maciejewski and Martin R. Schiller}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Exact algorithms for motif search}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {239--248}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/125.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/RajasekaranBHTGMS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ShenT05, author = {Li Shen and Eng Chong Tan}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {{PLS} and {SVD} based penalized logistic regression for cancer classification using microarray data}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {219--228}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/246.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ShenT05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ShiC05, author = {Chao Shi and Lihui Chen}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Feature dimension reduction for microarray data analysis using locally linear embedding}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {211--217}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/162.pdf}, timestamp = {Thu, 02 Sep 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/ShiC05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/TanCCVB05, author = {Sin Lam Tan and Vidhu Choudhary and Alan Christoffels and Byrappa Venkatesh and Vladimir B. Bajic}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Comparison of core promoters in Fugu rubripes and human}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {379}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/bajic.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/TanCCVB05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WangCH05, author = {Shiou{-}Ling Wang and Chung{-}Ming Chen and Ming{-}Jing Hwang}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Classification of protein 3D folds by hidden Markov learning on sequences of structural alphabets}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {65--72}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/161.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/WangCH05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WangF05, author = {Xiuying Wang and David Dagan Feng}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Hybrid registration for two-dimensional gel protein images}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {201--210}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/241.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/WangF05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WangZLM05, author = {Lusheng Wang and Daming Zhu and Xiaowen Liu and Shaohan Ma}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {An O(N\({}^{\mbox{2}}\)) algorithm for signed translocation problem}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {349--358}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/186.pdf}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/WangZLM05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WuLYW05, author = {Gang Wu and Guohui Lin and Jia{-}Huai You and Xiaomeng Wu}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Faster solution to the maximum quartet consistency problem with constraint programming}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {329--338}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/128.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/WuLYW05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/XuBK05, author = {Emily W. Xu and Daniel G. Brown and Paul Kearney}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {The use of functional domains to improve transmembrane protein topology prediction}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {105--116}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/147.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/XuBK05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/XuYL05, author = {Jinbo Xu and Libo Yu and Ming Li}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Consensus fold recognition by predicted model quality}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {73--83}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/236.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/XuYL05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/YiuCLSTW05, author = {Siu{-}Ming Yiu and P. Y. Chan and Tak Wah Lam and Wing{-}Kin Sung and Hing{-}Fung Ting and Prudence W. H. Wong}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Allowing mismatches in anchors for wholw genome alignment: Generation and effectiveness}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {1--10}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/192.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/YiuCLSTW05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ZhangTN05, author = {Zhuo Zhang and Suisheng Tang and See{-}Kiong Ng}, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Toward discovering disease-specific gene networks from online literature}, booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, pages = {161--169}, publisher = {Imperial College Press, London}, year = {2005}, url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/201.pdf}, timestamp = {Tue, 24 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/ZhangTN05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/apbc/2005, editor = {Yi{-}Ping Phoebe Chen and Limsoon Wong}, title = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore}, publisher = {Imperial College Press, London}, year = {2005}, isbn = {1-86094-477-9}, timestamp = {Wed, 15 Mar 2006 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/2005.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BahadurATS04, author = {Dukka Bahadur and Tatsuya Akutsu and Etsuji Tomita and Tomokazu Seki}, editor = {Yi{-}Ping Phoebe Chen}, title = {Protein Side-chain Packing Problem: {A} Maximum Edge-weight Clique Algorithmic Approach}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {191--200}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Dukka.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/BahadurATS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BiroB04, author = {Jan C. Biro and Josephine M. K. Biro}, editor = {Yi{-}Ping Phoebe Chen}, title = {Recognition Sequences in the Restriction Endonucleases}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {217--222}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Biro.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/BiroB04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Bourne04, author = {Philip E. Bourne}, editor = {Yi{-}Ping Phoebe Chen}, title = {The Future of Bioinformatics}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {3}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Bourne.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/Bourne04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Brown04, author = {A. L. Brown}, editor = {Yi{-}Ping Phoebe Chen}, title = {Constructing Genome Scale Suffix Trees}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {105--112}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Brown.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/Brown04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/CarlssonC04, author = {Mats Carlsson and Nicolas Beldiceanu}, editor = {Yi{-}Ping Phoebe Chen}, title = {Dispensation Order Generation for Pyrosequencing}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {327--332}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Carlsson.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/CarlssonC04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Carrizo04, author = {Savrina F. Carrizo}, editor = {Yi{-}Ping Phoebe Chen}, title = {Phylogenetic Trees: An Information Visualisation Perspective}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {315--320}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Carrizo.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/Carrizo04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChattarajW04, author = {Abhijit Chattaraj and Hugh E. Williams}, editor = {Yi{-}Ping Phoebe Chen}, title = {Variable-length Intervals in Homology Search}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {85--91}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Chattaraj.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/ChattarajW04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChenZHY04, author = {Huiling Chen and Huan{-}Xiang Zhou and Xiaohua Hu and Illhoi Yoo}, editor = {Yi{-}Ping Phoebe Chen}, title = {Classification Comparison of Prediction of Solvent Accessibility From Protein Sequences}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {333--338}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Chen.html}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/ChenZHY04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DattaD04, author = {Somnath Datta and Susmita Datta}, editor = {Yi{-}Ping Phoebe Chen}, title = {An Empirical Bayes Adjustment to Multiple p-values for the Detection of Differentially Expressed Genes in Microarray Experiments}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {155--159}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Datta.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/DattaD04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DayalanBS04, author = {Saravanan Dayalan and Savitri Bevinakoppa and Heiko Schr{\"{o}}der}, editor = {Yi{-}Ping Phoebe Chen}, title = {A Dihedral Angle Database of Short Sub-sequences for Protein Structure Prediction}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {131--137}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Dayalan.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/DayalanBS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DeogunDKM04, author = {Jitender S. Deogun and Ruben Donts and Olga Komina and Fangrui Ma}, editor = {Yi{-}Ping Phoebe Chen}, title = {{RNA} Secondary Structure Prediction with Simple Pseudoknots}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {239--246}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Deogun2.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/DeogunDKM04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DeogunYM04, author = {Jitender S. Deogun and Jingyi Yang and Fangrui Ma}, editor = {Yi{-}Ping Phoebe Chen}, title = {{EMAGEN:} An Efficient Approach to Multiple Whole Genome Alignment}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {113--122}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Deogun1.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/DeogunYM04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DwyerRS04, author = {Tim Dwyer and Hardy Rolletschek and Falk Schreiber}, editor = {Yi{-}Ping Phoebe Chen}, title = {Representing Experimental Biological Data in Metabolic Networks}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {13--20}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Dwyer.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/DwyerRS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Feng04, author = {David Dagan Feng}, editor = {Yi{-}Ping Phoebe Chen}, title = {Molecular Imaging and Biomedical Process Modeling}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {5--10}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Feng.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/Feng04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/FukudaT04, author = {Ken{-}ichiro Fukuda and Toshihisa Takagi}, editor = {Yi{-}Ping Phoebe Chen}, title = {A Pathway Editor for Literature-based Knowledge Curation}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {339--344}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Fukuda.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/FukudaT04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/GohSK04, author = {Liang Goh and Qun Song and Nikola K. Kasabov}, editor = {Yi{-}Ping Phoebe Chen}, title = {A Novel Feature Selection Method to Improve Classification of Gene Expression Data}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {161--166}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Goh.html}, timestamp = {Wed, 10 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/GohSK04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/GoodeSDBR04, author = {Matthew Goode and Korbinian Strimmer and Alexei J. Drummond and Ed Buckler and Allen G. Rodrigo}, editor = {Yi{-}Ping Phoebe Chen}, title = {A Brief Introduction to the Phylogentics Analysis Library {V1.5}}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {175--179}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Goode.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/GoodeSDBR04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/GuoLS04, author = {Jian Guo and Yuanlie Lin and Zhirong Sun}, editor = {Yi{-}Ping Phoebe Chen}, title = {A Novel Method for Protein Subcellular Localization Based on Boosting and Probabilistic Neural Network.}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {21--27}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Guo.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/GuoLS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HallS04, author = {Ross Hall and Linda Stern}, editor = {Yi{-}Ping Phoebe Chen}, title = {A Rapid Method of Whole Genome Visualisation Illustrating Features in Both Coding and Non-coding Regions}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {285--290}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Hall.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/HallS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HallinanW04, author = {Jennifer Hallinan and Janet Wiles}, editor = {Yi{-}Ping Phoebe Chen}, title = {Evolving Genetic Regulatory Networks Using an Artificial Genome}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {291--296}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Hallinan.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/HallinanW04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HeRJCS04, author = {Jing He and Desh Ranjan and Wen Jiang and Wah Chiu and Michael F. Schmid}, editor = {Yi{-}Ping Phoebe Chen}, title = {Detecting Local Symmetry Axis in 3-dimensional Virus Structures}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {265--270}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29He.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/HeRJCS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HeringIH04, author = {Joachim A. Hering and Peter R. Innocent and Parvez I. Haris}, editor = {Yi{-}Ping Phoebe Chen}, title = {Empirical Knowledge and Genetic Algorithms for Selection of Amide {I} Frequencies in Protein Secondary Structure Prediction}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {345--350}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Hering.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/HeringIH04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HoyMM04, author = {Jason E. Sew Hoy and Alan F. McCulloch and John R. McDonald}, editor = {Yi{-}Ping Phoebe Chen}, title = {BRINet: {A} BioResource Integration Network}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {29--34}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Hoy.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/HoyMM04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/HuY04, author = {Xiaohua Hu and Illhoi Yoo}, editor = {Yi{-}Ping Phoebe Chen}, title = {Cluster Ensemble and Its Applications in Gene Expression Analysis}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {297--302}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Hu.html}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/HuY04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KaburagiMHSM04, author = {Takashi Kaburagi and Daigo Muramatsu and Sho Hashimoto and Masahiro Sasaki and Takashi Matsumoto}, editor = {Yi{-}Ping Phoebe Chen}, title = {Transmembrane Region Prediction with Hydropathy Index/Charge Two-Dimensional Trajectories of Stochastic Dynamical Systems}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {35--42}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Kaburagi.html}, timestamp = {Fri, 16 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/KaburagiMHSM04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KongTTW04, author = {Waiming Kong and Lawrence Tham and Kee Yew Wong and Patrick Tan}, editor = {Yi{-}Ping Phoebe Chen}, title = {Support Vector Machine Approach for Cancer Detection Using Amplified Fragment Length Polymorphism {(AFLP)} Screening Method.}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {63--66}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Kong.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/KongTTW04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LaiKCW04, author = {Paulo Lai and Warren Kaplan and W. Bret Church and Raymond K. Wong}, editor = {Yi{-}Ping Phoebe Chen}, title = {Informative 3D Visualization of Multiple Protein Structures}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {201--208}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Lai.html}, timestamp = {Thu, 24 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/LaiKCW04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LiLW04, author = {Jinyan Li and Huiqing Liu and Limsoon Wong}, editor = {Yi{-}Ping Phoebe Chen}, title = {Use of Built-in Features in the Interpretation of High-dimensional Cancer Diagnosis Data.}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {67--74}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Li.html}, timestamp = {Tue, 06 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/LiLW04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LuoL04, author = {Hong Luo and Jingchu Luo}, editor = {Yi{-}Ping Phoebe Chen}, title = {Initial {SARS} Genome Data Analysis Using a Bioinformatics Platform}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {271--276}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Luo.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/LuoL04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/MagliaLG04, author = {Anne M. Maglia and Jennifer L. Leopold and Venkat Ram Ghatti}, editor = {Yi{-}Ping Phoebe Chen}, title = {Identifying Character Non-Independence in Phylogenetic Data Using Data Mining Techniques}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {181--189}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Maglia.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/MagliaLG04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/McLachlanCMAZ04, author = {Geoffrey J. McLachlan and Soong Chang and Jess Mar and Christophe Ambroise and Justin Xi Zhu}, editor = {Yi{-}Ping Phoebe Chen}, title = {On the Simultaneous Use of Clinical and Microarray Expression Data in the Cluster Analysis of Tissue Samples}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {167--171}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29McLachlan.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/McLachlanCMAZ04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/MeintjesR04, author = {Peter L. Meintjes and Allen G. Rodrigo}, editor = {Yi{-}Ping Phoebe Chen}, title = {Evolution of Relative Synonymous Codon Usage in Human Immunodeficiency Virus Type 1}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {277--282}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Meintjes.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/MeintjesR04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/NagasakiDMM04, author = {Masao Nagasaki and Atsushi Doi and Hiroshi Matsuno and Satoru Miyano}, editor = {Yi{-}Ping Phoebe Chen}, title = {Integrating Biopathway Databases for Large-scale Modeling and Simulation}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {43--52}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Nagasaki.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/NagasakiDMM04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/NeuhauserL04, author = {Markus Neuh{\"{a}}user and Fred C. Lam}, editor = {Yi{-}Ping Phoebe Chen}, title = {Nonparametric Approaches to Detecting Differentially Expressed Genes in Replicated Microarray Experiments}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {139--143}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Neuhauser.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/NeuhauserL04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/NgZO04, author = {See{-}Kiong Ng and Zexuan Zhu and Yew{-}Soon Ong}, editor = {Yi{-}Ping Phoebe Chen}, title = {Whole-Genome Functional Classification of Genes by Latent Semantic Analysis on Microarray Data}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {123--129}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Ng.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/NgZO04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/NicolauN04, author = {Dan V. Nicolau Jr. and Dan V. Nicolau}, editor = {Yi{-}Ping Phoebe Chen}, title = {Towards a Theory of Protein Adsorption: Predicting the Adsorption of Proteins on Surfaces via a Piecewise Linear Model}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {351--356}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Nicolau.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/NicolauN04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/PaiCCCT04, author = {Tun{-}Wen Pai and Margaret Dah{-}Tsyr Chang and Jia{-}Han Chu and Wei{-}Yuan Chang and Hsiu Ling Tai}, editor = {Yi{-}Ping Phoebe Chen}, title = {Ladderlike Stepping and Interval Jumping Searching Algorithms for {DNA} Sequences}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {93--98}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Pai.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/PaiCCCT04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/RiazWL04, author = {Tariq Riaz and Yi Wang and Kuo{-}Bin Li}, editor = {Yi{-}Ping Phoebe Chen}, title = {Multiple Sequence Alignment Using Tabu Search}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {223--232}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Riaz.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/RiazWL04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SaraiSGK04, author = {Akinori Sarai and Samuel Selvaraj and M. Michael Gromiha and Hidetoshi Kono}, editor = {Yi{-}Ping Phoebe Chen}, title = {Structure-Function Relationship in {DNA} Sequence Recognition by Transcription Factors}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {233--238}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Sarai.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/SaraiSGK04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ShehadiUMIO04, author = {Ihsan A. Shehadi and Alper Uzun and Leonel F. Murga and Valentin A. Ilyin and Mary Jo Ondrechen}, editor = {Yi{-}Ping Phoebe Chen}, title = {{THEMATICS} is Effective for Active Site Prediction in Comparative Model Structures}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {209--215}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Shehadi.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/ShehadiUMIO04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SunS04, author = {Zhaohui Sun and Jitender S. Deogun}, editor = {Yi{-}Ping Phoebe Chen}, title = {Local Prediction Approach of Protein Classification using Probabilistic Suffix Trees}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {357--362}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Sun.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/SunS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WangLYW04, author = {Daolong Wang and Mario Lauria and Bo Yuan and Fred A. Wright}, editor = {Yi{-}Ping Phoebe Chen}, title = {Mega Weaver: {A} Simple Iterative Approach for {BAC} Consensus Assembly}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {145--153}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Wang.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/WangLYW04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WongLMYKLC04, author = {Prudence W. H. Wong and Tak Wah Lam and Y. C. Mui and Siu{-}Ming Yiu and Hsiang{-}fu Kung and Marie C. M. Lin and Y. T. Cheung}, editor = {Yi{-}Ping Phoebe Chen}, title = {Filtering of Ineffective siRNAs and Improved siRNA Design Tool}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {247--255}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Wong.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/WongLMYKLC04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WuCSW04, author = {Xiaoming Wu and Bo Wang and Changxin Song and Jingzhi Cheng}, editor = {Yi{-}Ping Phoebe Chen}, title = {A Combined Model and a Varied Gibbs Sampling Algorithm Used for Motif Discovery}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {99--104}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Wu.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/WuCSW04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Wunsche04, author = {Burkhard W{\"{u}}nsche}, editor = {Yi{-}Ping Phoebe Chen}, title = {Advanced Texturing Techniques for the Effective Visualization of Neoroanatomy from Diffusion Tensor Imaging Data}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {303--308}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Wuensche.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/Wunsche04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/YaoWLNSZLPLQ04, author = {Daming Yao and Jingbo Wang and Yanmei Lu and Nathan Noble and Huandong Sun and Xiaoyan Zhu and Nan Lin and Donald G. Payan and Ming Li and Kunbin Qu}, editor = {Yi{-}Ping Phoebe Chen}, title = {PathwayFinder: Paving the Way Towards Automatic Pathway Extraction}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {53--62}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Yao.html}, timestamp = {Tue, 06 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/YaoWLNSZLPLQ04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/YeungYLSYK04, author = {Lap Kun Yeung and Hong Yan and Alan Wee{-}Chung Liew and Lap Keung Szeto and Michael Yang and Richard Kong}, editor = {Yi{-}Ping Phoebe Chen}, title = {Measuring Correlation between Microarray Time-series Data using Dominant Spectrum Component}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {309--314}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Yeung.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/YeungYLSYK04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/YuA04, author = {Zu{-}Guo Yu and Vo Anh}, editor = {Yi{-}Ping Phoebe Chen}, title = {Phylogenetic Tree of Prokaryotes Based on the Complete Genomes using Fractal and Correlation Analyses}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {321--326}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Yu2.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/YuA04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/YuCCY04, author = {Larry T. H. Yu and Fu{-}Lai Chung and Stephen Chi{-}fai Chan and Simon M. C. Yuen}, editor = {Yi{-}Ping Phoebe Chen}, title = {Using Emerging Pattern Based Projected Clustering and Gene Expression Data for Cancer Detection}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {75--84}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Yu.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/YuCCY04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/YuWD04, author = {Ying Yu and Lusheng Wang and Xiaotie Deng}, editor = {Yi{-}Ping Phoebe Chen}, title = {Exact Pattern Matching for {RNA} Secondary Structures}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {257--263}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Xu.html}, timestamp = {Wed, 15 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/YuWD04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/apbc/2004, editor = {Yi{-}Ping Phoebe Chen}, title = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, publisher = {Australian Computer Society}, year = {2004}, isbn = {1-920682-11-2}, timestamp = {Wed, 18 Aug 2004 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/2004.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BajicBLNW03, author = {Vladimir B. Bajic and Vladimir Brusic and Jinyan Li and See{-}Kiong Ng and Limsoon Wong}, editor = {Yi{-}Ping Phoebe Chen}, title = {From Informatics to Bioinformatics}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {3--12}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Bajic.html}, timestamp = {Tue, 06 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/BajicBLNW03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BlackwellR03, author = {Bruce Blackwell and Siva Ravada}, editor = {Yi{-}Ping Phoebe Chen}, title = {Oracle's Technology for Bioinformatics and Future Directions}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {35--42}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Blackwell.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/BlackwellR03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BorschbachLMN03, author = {Markus Borschbach and Wolfram{-}Manfred Lippe and C. Mertens and S. Niedieck}, editor = {Yi{-}Ping Phoebe Chen}, title = {Analysing MEG-Data by a Combination of Different Neural Networks}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {181--188}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Borschbach.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/BorschbachLMN03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/BrownJS03, author = {Chris M. Brown and Grant H. Jacobs and Mark J. Schreiber}, editor = {Yi{-}Ping Phoebe Chen}, title = {Signals in mRNAs that Influence the Initiation of Translation}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {203--206}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Brown.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/BrownJS03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Caldon03, author = {Patrick Caldon}, editor = {Yi{-}Ping Phoebe Chen}, title = {Using Text Classification to Predict the Gene Knockout Behaviour of S. Cerevisiae}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {211--214}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Caldon.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/Caldon03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChangLLK03, author = {Hsuan T. Chang and Neng{-}Wen Lo and Wei C. Lu and Chung J. Kuo}, editor = {Yi{-}Ping Phoebe Chen}, title = {Visualisation and Comparison of {DNA} Sequences by Use of Three-Dimensional Trajectories}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {81--85}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Chang.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/ChangLLK03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ChoW03, author = {Sung{-}Bae Cho and Hong{-}Hee Won}, editor = {Yi{-}Ping Phoebe Chen}, title = {Machine Learning in {DNA} Microarray Analysis for Cancer Classification}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {189--198}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Cho.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/ChoW03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DalrympleWKJ03, author = {Brian P. Dalrymple and Gene Wijffels and Kritaya Kongsuwan and Philip J. Jennings}, editor = {Yi{-}Ping Phoebe Chen}, title = {Towards an understanding of protein-protein interaction network heirarchies. Analysis of DnaN-binding peptide motifs in members of protein families interacting with the eubacterial processivity clamp, the subunit of {DNA} Polymerase {III}}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {153--162}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Dalrymple.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/DalrympleWKJ03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KasabovML03, author = {Nikola K. Kasabov and Melanie Middlemiss and T. Lane}, editor = {Yi{-}Ping Phoebe Chen}, title = {A Generic Connectionist-Based Method for On-Line Feature Selection and Modelling with a Case Study of Gene Expression Data Analysis}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {199--202}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Kasabov.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/KasabovML03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KeithABMCL03, author = {Jonathan M. Keith and Peter Adams and Darryn E. Bryant and Keith R. Mitchelson and Duncan A. E. Cochran and Gita H. Lala}, editor = {Yi{-}Ping Phoebe Chen}, title = {Inferring an Original Sequence from Erroneous Copies : {A} Bayesian Approach}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {23--28}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Keith.html}, timestamp = {Mon, 18 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/apbc/KeithABMCL03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/KurataBSD03, author = {Ken{-}ichi Kurata and Vincent Breton and Christian Saguez and Gerald Dine}, editor = {Yi{-}Ping Phoebe Chen}, title = {Evaluation of Unique Sequences on the European Data Grid}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {43--52}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Kurata.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/KurataBSD03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LambrixJ03, author = {Patrick Lambrix and Vaida Jakoniene}, editor = {Yi{-}Ping Phoebe Chen}, title = {Towards Transparent Access to Multiple Biological Databanks}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {53--60}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Lambrix.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/LambrixJ03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/LiO03, author = {Jinyan Li and Hwee{-}Leng Ong}, editor = {Yi{-}Ping Phoebe Chen}, title = {Feature Space Transformation and Decision Results Interpretation}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {129--137}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Li.html}, timestamp = {Wed, 07 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/LiO03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/MarM03, author = {J. C. Mar and Geoffrey J. McLachlan}, editor = {Yi{-}Ping Phoebe Chen}, title = {Model-Based Clustering in Gene Expression Microarrays: An Application to Breast Cancer Data}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {139--144}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Mar.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/MarM03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/NicolauFN03, author = {Dan V. Nicolau Jr. and Florin Fulga and Dan V. Nicolau}, editor = {Yi{-}Ping Phoebe Chen}, title = {A New Program to Compute the Surface Properties of Biomolecules}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {29--34}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Nicolau.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/NicolauFN03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/PalopoliT03, author = {Luigi Palopoli and Giorgio Terracina}, editor = {Yi{-}Ping Phoebe Chen}, title = {A Framework for Improving Protein Structure Predictions by Teamwork}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {163--171}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Palopoli.html}, timestamp = {Mon, 18 Jul 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/PalopoliT03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Schreiber03, author = {Falk Schreiber}, editor = {Yi{-}Ping Phoebe Chen}, title = {Comparison of Metabolic Pathways using Constraint Graph Drawing}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {105--110}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Schreiber.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/Schreiber03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SegalB03, author = {Tariq Segal and Ross Barnard}, editor = {Yi{-}Ping Phoebe Chen}, title = {Let the Shoemaker Make the Shoes - An Abstraction Layer is Needed Between Bioinformatic Analysis, Tools, Data and Equipment : An Agenda for the Next Five Years}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {215--218}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Segal.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/SegalB03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/ShuiWGLC03, author = {William M. Shui and Raymond K. Wong and Stephen C. Graham and Lawrence K. Lee and W. Bret Church}, editor = {Yi{-}Ping Phoebe Chen}, title = {A New Approach to Protein Structure and Function Analysis Using Semi-structured Databases}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {61--69}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Shui.html}, timestamp = {Thu, 24 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/ShuiWGLC03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/SzetoLYT03, author = {Lap Keung Szeto and Alan Wee{-}Chung Liew and Hong Yan and Sy{-}sen Tang}, editor = {Yi{-}Ping Phoebe Chen}, title = {Gene Expression Data Clustering and Visualization Based on a Binary Heirarchical Clustering Framework}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {145--152}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Szeto.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/SzetoLYT03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/TanG03, author = {Aik Choon Tan and David R. Gilbert}, editor = {Yi{-}Ping Phoebe Chen}, title = {An Empirical Comparison of Supervised Machine Learning Techniques in Bioinformatics}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {219--222}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Tan.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/TanG03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/TyrelleK03, author = {Greg D. Tyrelle and Garry C. King}, editor = {Yi{-}Ping Phoebe Chen}, title = {A Platform for the Description, Distribution and Analysis of Genetic Polymorphism Data}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {173--180}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Tyrelle.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/TyrelleK03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WangFH03, author = {Xiuying Wang and David Dagan Feng and Hai Hong}, editor = {Yi{-}Ping Phoebe Chen}, title = {Novel Elastic Registration for 2-D Medical and Gel Protein Images}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {223--226}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19XWang.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/WangFH03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WangOOT03, author = {Hao Wang and Twee{-}Hee Ong and Beng Chin Ooi and Kian{-}Lee Tan}, editor = {Yi{-}Ping Phoebe Chen}, title = {{BLAST++} : {A} Tool for BLASTing Queries in Batches}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {71--79}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19HWang.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/WangOOT03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/WuY03, author = {Shuanhu Wu and Hong Yan}, editor = {Yi{-}Ping Phoebe Chen}, title = {Microarray Image Processing Based on Clustering and Morphological Analysis}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {111--118}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Wu.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/WuY03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Wunsche03, author = {Burkhard W{\"{u}}nsche}, editor = {Yi{-}Ping Phoebe Chen}, title = {The Visualization and Measurement of Left Ventricular Deformation}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {119--128}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Wuensche.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/Wunsche03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/apbc/2003, editor = {Yi{-}Ping Phoebe Chen}, title = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, publisher = {Australian Computer Society}, year = {2003}, isbn = {0-909-92597-6}, timestamp = {Wed, 18 Aug 2004 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/2003.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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