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Olivier Dameron
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- affiliation: Stanford University, USA
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2020 – today
- 2024
- [j14]Marine Louarn, Guillaume Collet, Ève Barré, Thierry Fest, Olivier Dameron, Anne Siegel, Fabrice Chatonnet:
Regulus infers signed regulatory relations from few samples' information using discretization and likelihood constraints. PLoS Comput. Biol. 20(1) (2024) - [c29]Moussa Baddour, Stéphane Paquelet, Paul Rollier, Marie de Tayrac, Olivier Dameron, Thomas Labbé:
Phenotypes Extraction from Text: Analysis and Perspective in the LLM Era. IS 2024: 1-8 - 2023
- [j13]Camille Juigné, Olivier Dameron, François Moreews, Florence Gondret, Emmanuelle Becker:
Fixing molecular complexes in BioPAX standards to enrich interactions and detect redundancies using semantic web technologies. Bioinform. 39(5) (2023) - 2022
- [j12]Marc Melkonian, Camille Juigné, Olivier Dameron, Gwenaël Rabut, Emmanuelle Becker:
Towards a reproducible interactome: semantic-based detection of redundancies to unify protein-protein interaction databases. Bioinform. 38(6): 1685-1691 (2022) - [j11]Marine Louarn, Fabrice Chatonnet, Xavier Garnier, Thierry Fest, Anne Siegel, Catherine Faron, Olivier Dameron:
Improving reusability along the data life cycle: a regulatory circuits case study. J. Biomed. Semant. 13(1): 11 (2022) - 2021
- [c28]Johanne Bakalara, Thomas Guyet, Olivier Dameron, André Happe, Emmanuel Oger:
An Extension of Chronicles Temporal Model with Taxonomies: Application to Epidemiological Studies. HEALTHINF 2021: 133-142
2010 – 2019
- 2019
- [j10]Yann Rivault, Olivier Dameron, Nolwenn Le Meur:
queryMed: Semantic Web functions for linking pharmacological and medical knowledge to data. Bioinform. 35(17): 3203-3205 (2019) - [c27]Marine Louarn, Fabrice Chatonnet, Xavier Garnier, Thierry Fest, Anne Siegel, Olivier Dameron:
Increasing Life Science Resources Re-Usability using Semantic Web Technologies. eScience 2019: 217-225 - 2018
- [j9]Méziane Aite, Marie Chevallier, Clémence Frioux, Camille Trottier, Jeanne Got, María Paz Cortés, Sebastián N. Mendoza, Grégory Carrier, Olivier Dameron, Nicolas Guillaudeux, Mauricio Latorre, Nicolás Loira, Gabriel V. Markov, Alejandro Maass, Anne Siegel:
Traceability, reproducibility and wiki-exploration for "à-la-carte" reconstructions of genome-scale metabolic models. PLoS Comput. Biol. 14(5) (2018) - [c26]Vincent Henry, Ivan Moszer, Olivier Dameron, Marie-Claude Potier, Martin Hofmann-Apitius, Olivier Colliot:
Converting Alzheimer's Disease Map into a Heavyweight Ontology: A Formal Network to Integrate Data. DILS 2018: 207-215 - 2017
- [c25]Yann Rivault, Nolwenn Le Meur, Olivier Dameron:
A Similarity Measure Based on Care Trajectories as Sequences of Sets. AIME 2017: 278-282 - [c24]Jean Coquet, Nathalie Théret, Vincent Legagneux, Olivier Dameron:
Identifying Functional Families of Trajectories in Biological Pathways by Soft Clustering: Application to TGF-β Signaling. CMSB 2017: 91-107 - 2016
- [b1]Olivier Dameron:
Ontology-based methods for analyzing life science data. University of Rennes 1, France, 2016 - 2015
- [j8]Andrej Machno, Pierre Jannin, Olivier Dameron, Werner Korb, Gerik Scheuermann, Jürgen Meixensberger:
Ontology for assessment studies of human-computer-interaction in surgery. Artif. Intell. Medicine 63(2): 73-84 (2015) - 2014
- [j7]Gautier Defossez, Alexandre Rollet, Olivier Dameron, Pierre Ingrand:
Temporal representation of care trajectories of cancer patients using data from a regional information system: an application in breast cancer. BMC Medical Informatics Decis. Mak. 14: 24 (2014) - 2013
- [j6]Olivier Dameron, Paolo Besana, Oussama Zekri, Annabel Bourde, Anita Burgun, Marc Cuggia:
OWL model of clinical trial eligibility criteria compatible with partially-known information. J. Biomed. Semant. 4: 17 (2013) - [j5]Jean-François Ethier, Olivier Dameron, Vasa Curcin, Mark M. McGilchrist, Robert A. Verheij, Theodoros N. Arvanitis, Adel Taweel, Brendan Delaney, Anita Burgun:
A unified structural/terminological interoperability framework based on LexEVS: application to TRANSFoRm. J. Am. Medical Informatics Assoc. 20(5): 986-994 (2013) - 2012
- [j4]Charles Bettembourg, Christian Diot, Anita Burgun, Olivier Dameron:
GO2PUB: Querying PubMed with semantic expansion of gene ontology terms. J. Biomed. Semant. 3: 7 (2012) - [c23]Pascal Van Hille, Julie Jacques, Julien Taillard, Arnaud Rosier, David Delerue, Anita Burgun, Olivier Dameron:
Comparing Drools and ontology reasoning approaches for telecardiology decision support. MIE 2012: 300-304 - [c22]Wiktoria Golik, Olivier Dameron, Jérôme Bugeon, Alice Fatet, Isabelle Hue, Catherine Hurtaud, Matthieu Reichstadt, Marie-Christine Salaün, Jean Vernet, Léa Joret, Frédéric Papazian, Claire Nedellec, Pierre-Yves Le Bail:
ATOL: The Multi-species Livestock Trait Ontology. MTSR 2012: 289-300 - [c21]Olivier Dameron, Paolo Besana, Oussama Zekri, Annabel Bourde, Anita Burgun, Marc Cuggia:
OWL Model of Clinical Trial Eligibility Criteria Compatible with Partially-known Information. SWAT4LS 2012 - 2010
- [j3]Amrapali Zaveri, Luciana Cofiel, Jatin Shah, Shreyasee S. Pradhan, Edwin Chan, Olivier Dameron, Ricardo Pietrobon, Beng Ti Ang:
Achieving High Research Reporting Quality Through the Use of Computational Ontologies. Neuroinformatics 8(4): 261-271 (2010) - [c20]Nicolas Lebreton, Christophe Blanchet, Daniela Barreiro Claro, Julie Chabalier, Anita Burgun, Olivier Dameron:
Verification of parameters semantic compatibility for semi-automatic web service composition: a generic case study. iiWAS 2010: 845-848 - [c19]Lynda Temal, Arnaud Rosier, Olivier Dameron, Anita Burgun:
Mapping BFO and DOLCE. MedInfo 2010: 1065-1069
2000 – 2009
- 2009
- [c18]Cyril Grouin, Arnaud Rosier, Olivier Dameron, Pierre Zweigenbaum:
Testing Tactics to Localize De-Identification. MIE 2009: 735-739 - 2008
- [c17]Olivier Dameron, Julie Chabalier:
Bio-ontologies Tutorial. DILS 2008: 208 - [c16]Elena Beisswanger, Vivian Lee, Jung-Jae Kim, Dietrich Rebholz-Schuhmann, Andrea Splendiani, Olivier Dameron, Stefan Schulz, Udo Hahn:
Gene Regulation Ontology (GRO): Design Principles and Use Cases. MIE 2008: 9-14 - 2007
- [j2]Olivier Dameron, Mark A. Musen, Bernard Gibaud:
Using semantic dependencies for consistency management of an ontology of brain-cortex anatomy. Artif. Intell. Medicine 39(3): 217-225 (2007) - [c15]Gwenaëlle Marquet, Olivier Dameron, Stephan Saikali, Jean Mosser, Anita Burgun:
Grading glioma tumors using OWL-DL and NCI Thesaurus. AMIA 2007 - 2006
- [j1]Daniel L. Rubin, Olivier Dameron, Yasser Bashir, David Grossman, Parvati Dev, Mark A. Musen:
Using ontologies linked with geometric models to reason about penetrating injuries. Artif. Intell. Medicine 37(3): 167-176 (2006) - 2005
- [c14]Olivier Dameron, Daniel L. Rubin, Mark A. Musen:
Challenges in Converting Frame-Based Ontology into OWL: the Foundational Model of Anatomy Case-Study. AMIA 2005 - [c13]Daniel L. Rubin, Olivier Dameron, Mark A. Musen:
Use of Description Logic Classification to Reason about Consequences of Penetrating Injuries. AMIA 2005 - [c12]Daniel L. Rubin, Holger Knublauch, Ray W. Fergerson, Olivier Dameron, Mark A. Musen:
Protégé-OWL: Creating Ontology-Driven Reasoning Applications with the Web Ontology Language. AMIA 2005 - [c11]Christine Golbreich, Olivier Bierlaire, Olivier Dameron, Bernard Gibaud:
Use Case: Ontology with Rules for identifying brain anatomical structures. Rule Languages for Interoperability 2005 - 2004
- [c10]Olivier Dameron, Bernard Gibaud, Mark A. Musen:
Using semantic dependencies for consistency management of an ontology of brain-cortex anatomy. KR-MED 2004: 30-38 - [c9]Holger Knublauch, Olivier Dameron, Mark A. Musen:
Weaving the biomedical Semantic Web with the Prote'ge' OWL Plugin. KR-MED 2004: 39-47 - [c8]Olivier Dameron, Natalya Fridman Noy, Holger Knublauch, Mark A. Musen:
Accessing and Manipulating Ontologies Using Web Services. SWS@ISWC 2004 - 2003
- [c7]Christine Golbreich, Olivier Dameron, Bernard Gibaud, Anita Burgun:
How to Represent Medical Ontologies in View of a Semantic Web? AIME 2003: 51-60 - [c6]Olivier Dameron, Anita Burgun, Xavier Morandi, Bernard Gibaud:
Modelling dependencies between relations to ensure consistency of a cerebral cortex anatomy knowledge base. MIE 2003: 403-408 - [c5]Bernard Gibaud, Olivier Dameron, Xavier Morandi:
Re-use of a multi-purpose knowledge corpus on cortex anatomy for educational purposes. MIE 2003: 439-444 - [c4]Christine Golbreich, Olivier Dameron, Bernard Gibaud, Anita Burgun:
Web Ontology Language Requirements w.r.t Expressiveness of Taxonomy and Axioms in Medicine. ISWC 2003: 180-194 - 2002
- [c3]Olivier Dameron, Bernard Gibaud, Anita Burgun, Xavier Morandi:
Towards a sharable numeric and symbolic knowledge base on cerebral cortex anatomy: lessons learned from a prototype. AMIA 2002 - 2001
- [c2]Olivier Dameron, Bernard Gibaud, Xavier Morandi:
Numeric and Symbolic Knowledge Representation of Cortex Anatomy Using Web Technologies. AIME 2001: 359-368 - [c1]Bernard Gibaud, Olivier Dameron, Xavier Morandi:
Representing and sharing numeric and symbolic knowledge of brain cortex anatomy using web technology. CARS 2001: 372-378
Coauthor Index
aka: Anita Burgun
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last updated on 2024-10-23 21:23 CEST by the dblp team
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