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Journal Articles
- 2017
[j16]Austin W. T. Chiang
, Walt Y. L. Wu, Ting Wang, Ming-Jing Hwang:
Identification of Entry Factors Involved in Hepatitis C Virus Infection Based on Host-Mimicking Short Linear Motifs. PLoS Comput. Biol. 13(1) (2017)- 2014
- [j15]Austin W. T. Chiang, Wei-Chung Liu, Pep Charusanti, Ming-Jing Hwang:
Understanding system dynamics of an adaptive enzyme network from globally profiled kinetic parameters. BMC Syst. Biol. 8: 4 (2014) - 2013
- [j14]Austin W. T. Chiang, Ming-Jing Hwang:
A computational pipeline for identifying kinetic motifs to aid in the design and improvement of synthetic gene circuits. BMC Bioinform. 14(S-16): S5 (2013) - [j13]Zhong-Ru Xie, Chuan-Kun Liu, Fang-Chih Hsiao, Adam Yao, Ming-Jing Hwang:
LISE: a server using ligand-interacting and site-enriched protein triangles for prediction of ligand-binding sites. Nucleic Acids Res. 41(Webserver-Issue): 292-296 (2013) - 2012
- [j12]Zhong-Ru Xie, Ming-Jing Hwang:
Ligand-binding site prediction using ligand-interacting and binding site-enriched protein triangles. Bioinform. 28(12): 1579-1585 (2012) - 2010
- [j11]Zhong-Ru Xie, Ming-Jing Hwang:
An interaction-motif-based scoring function for protein-ligand docking. BMC Bioinform. 11: 298 (2010) - 2009
- [j10]Wen-hsien Lin, Wei-Chung Liu, Ming-Jing Hwang:
Topological and organizational properties of the products of house-keeping and tissue-specific genes in protein-protein interaction networks. BMC Syst. Biol. 3: 32 (2009) - 2007
- [j9]Wei-Chung Liu, Wen-hsien Lin, Andrew J. Davis, Ferenc Jordán, Hsih-te Yang, Ming-Jing Hwang:
A network perspective on the topological importance of enzymes and their phylogenetic conservation. BMC Bioinform. 8 (2007) - 2006
- [j8]Edward S. C. Shih, Ruei-chi R. Gan, Ming-Jing Hwang:
OPAAS: a web server for optimal, permuted, and other alternative alignments of protein structures. Nucleic Acids Res. 34(Web-Server-Issue): 95-98 (2006) - [j7]Darby Tien-Hao Chang, Yi-Zhong Weng, Jung-Hsin Lin, Ming-Jing Hwang, Yen-Jen Oyang:
Protemot: prediction of protein binding sites with automatically extracted geometrical templates. Nucleic Acids Res. 34(Web-Server-Issue): 303-309 (2006) - 2004
- [j6]Ben-Yang Liao, Yu-Jung Chang, Jan-Ming Ho, Ming-Jing Hwang:
The UniMarker (UM) method for synteny mapping of large genomes. Bioinform. 20(17): 3156-3165 (2004) - 2003
- [j5]Edward S. C. Shih, Ming-Jing Hwang:
Protein structure comparison by probability-based matching of secondary structure elements. Bioinform. 19(6): 735-741 (2003) - 2001
- [j4]Carl S. Ewig, Rajiv Berry, Uri Dinur, Jörg-Rüdiger Hill, Ming-Jing Hwang, Haiying Li, Chris Liang, Jon Maple, Zhengwei Peng, Thomas P. Stockfisch, Thomas S. Thacher, Lisa Yan, Xiangshan Ni, Arnold T. Hagler:
Derivation of class II force fields. VIII. Derivation of a general quantum mechanical force field for organic compounds. J. Comput. Chem. 22(15): 1782-1800 (2001) - 1999
- [j3]Ming-Jing Hwang, Pei-Ying Chu, Jye-Chan Chen, Ito Chao:
Conformational analysis of three pyrophosphate model species: Diphosphate, methyl diphosphate, and triphosphate. J. Comput. Chem. 20(16): 1702-1715 (1999) - 1998
- [j2]J. R. Maple, Ming-Jing Hwang, Karl James Jalkanen, Thomas P. Stockfisch, Arnold T. Hagler:
Derivation of class II force fields: V. Quantum force field for amides, peptides, and related compounds. J. Comput. Chem. 19(4): 430-458 (1998) - 1994
- [j1]J. R. Maple, Ming-Jing Hwang, Thomas P. Stockfisch, Uri Dinur, Marvin Waldman, Carl S. Ewig, Arnold T. Hagler:
Derication of Class II Force Fields. I. Methology and Quantum Force Field for the Alkyl Functional Group and Alkane Molecules. J. Comput. Chem. 15(2): 162-182 (1994)
Conference and Workshop Papers
- 2014
- [c4]Austin W. T. Chiang, Grace Shaw, Ming-Jing Hwang:
Hkera, a human transcriptome partitioner. IWBBIO 2014: 1039 - 2006
- [c3]Zhong-Ru Xie, Ming-Jing Hwang:
A New Neural Network for B-Turn Prediction: the Effect of Site-Specific Amino Acid Preference. APBC 2006: 237-246 - 2005
- [c2]Shiou-Ling Wang, Chung-Ming Chen, Ming-Jing Hwang:
Classification of protein 3D folds by hidden Markov learning on sequences of structural alphabets. APBC 2005: 65-72 - 2004
- [c1]In-Yee Lee, Ta-tsen Soong, Jan-Ming Ho, Ming-Jing Hwang:
Derivation and Analysis of Fragment Libraries of Protein Structures. BIBE 2004: 516-521
Coauthor Index
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