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Journal Articles
- 2023
[j14]Nina Petrovic
, Magbubah Essack, Ahmad Sami, George Perry, Takashi Gojobori, Esma R. Isenovic, Vladan P. Bajic:
MicroRNA networks linked with BRCA1/2, PTEN, and common genes for Alzheimer's disease and breast cancer share highly enriched pathways that may unravel targets for the AD/BC comorbidity treatment. Comput. Biol. Chem. 106: 107925 (2023)- 2021
- [j13]Maha A. Thafar, Rawan S. Olayan, Somayah Albaradei, Vladimir B. Bajic, Takashi Gojobori, Magbubah Essack, Xin Gao:
DTi2Vec: Drug-target interaction prediction using network embedding and ensemble learning. J. Cheminformatics 13(1): 71 (2021) - [j12]Mona Alshahrani, Maha A. Thafar, Magbubah Essack:
Application and evaluation of knowledge graph embeddings in biomedical data. PeerJ Comput. Sci. 7: e341 (2021) - 2020
- [j11]Somayah Albaradei, Francesco Napolitano, Mahmut Uludag, Maha A. Thafar, Sara Napolitano, Magbubah Essack, Vladimir B. Bajic, Xin Gao:
Automated Counting of Colony Forming Units Using Deep Transfer Learning From a Model for Congested Scenes Analysis. IEEE Access 8: 164340-164346 (2020) - [j10]Maha A. Thafar, Rawan S. Olayan, Haitham Ashoor, Somayah Albaradei, Vladimir B. Bajic, Xin Gao, Takashi Gojobori, Magbubah Essack:
DTiGEMS+: drug-target interaction prediction using graph embedding, graph mining, and similarity-based techniques. J. Cheminformatics 12(1): 44 (2020) - 2017
- [j9]Sebastian Schmeier, Tanvir Alam, Magbubah Essack, Vladimir B. Bajic:
TcoF-DB v2: update of the database of human and mouse transcription co-factors and transcription factor interactions. Nucleic Acids Res. 45(Database-Issue): D145-D150 (2017) - 2016
- [j8]Wail Ba-alawi, Othman Soufan, Magbubah Essack, Panos Kalnis, Vladimir B. Bajic:
DASPfind: new efficient method to predict drug-target interactions. J. Cheminformatics 8(1): 15:1-15:9 (2016) - [j7]Othman Soufan, Wail Ba-alawi, Moataz Afeef, Magbubah Essack, Panos Kalnis, Vladimir B. Bajic:
DRABAL: novel method to mine large high-throughput screening assays using Bayesian active learning. J. Cheminformatics 8(1): 64:1-64:14 (2016) - [j6]Adil Salhi, Magbubah Essack, Aleksandar Radovanovic, Benoit Marchand, Salim Bougouffa, André Antunes, Marta Filipa Simões, Feras F. Lafi, Olaa A. Motwalli, Ameerah Bokhari, Tariq Malas, Soha Al Amoudi, Ghofran Othum, Intikhab Alam, Katsuhiko Mineta, Xin Gao, Robert Hoehndorf, John A. C. Archer, Takashi Gojobori, Vladimir B. Bajic:
DESM: portal for microbial knowledge exploration systems. Nucleic Acids Res. 44(Database-Issue): 624-633 (2016) - 2015
- [j5]Abdullah M. Khamis, Magbubah Essack, Xin Gao, Vladimir B. Bajic:
Distinct profiling of antimicrobial peptide families. Bioinform. 31(6): 849-856 (2015) - 2014
- [j4]Salim Bougouffa, Aleksandar Radovanovic, Magbubah Essack, Vladimir B. Bajic:
DEOP: a database on osmoprotectants and associated pathways. Database J. Biol. Databases Curation 2014 (2014) - 2012
- [j3]Magbubah Essack, Cameron MacPherson, Sebastian Schmeier, Vladimir B. Bajic:
Identification of estrogen responsive genes using esophageal squamous cell carcinoma (ESCC) as a model. BMC Syst. Biol. 6: 135 (2012) - 2011
- [j2]Sebastian Schmeier, Ulf Schaefer, Magbubah Essack, Vladimir B. Bajic:
Network analysis of microRNAs and their regulation in human ovarian cancer. BMC Syst. Biol. 5: 183 (2011) - 2009
- [j1]Mandeep Kaur, Aleksandar Radovanovic, Magbubah Essack, Ulf Schaefer, Monique Maqungo, Tracey Kibler, Sebastian Schmeier, Alan Christoffels, Kothandaraman Narasimhan, Mahesh Choolani, Vladimir B. Bajic:
Database for exploration of functional context of genes implicated in ovarian cancer. Nucleic Acids Res. 37(Database-Issue): 820-823 (2009)
Conference and Workshop Papers
- 2020
- [c2]Maha A. Thafar, Somayah Albaradei, Rawan S. Olayan, Haitham Ashoor, Magbubah Essack, Vladimir B. Bajic:
Computational Drug-target Interaction Prediction based on Graph Embedding and Graph Mining. ICBBB 2020: 14-21 - 2019
- [c1]Somayah Albaradei, Maha A. Thafar, Christophe Van Neste, Magbubah Essack, Vladimir B. Bajic:
Metastatic State of Colorectal Cancer can be Accurately Predicted with Methylome. ICBRA 2019: 125-130
Coauthor Index
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