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Journal Articles
- 2022
[j50]Vicente Enguix, Jeanette K. Kenley, David Luck, Julien Cohen-Adad, Gregory A. Lodygensky:
NeoRS: A Neonatal Resting State fMRI Data Preprocessing Pipeline. Frontiers Neuroinformatics 16 (2022)- [j49]Ali Khatibi
, Shahabeddin Vahdat, Ovidiu V. Lungu, Jürgen Finsterbusch, Christian Büchel, Julien Cohen-Adad, Véronique Marchand-Pauvert, Julien Doyon:
Brain-spinal cord interaction in long-term motor sequence learning in human: An fMRI study. NeuroImage 253: 119111 (2022) - 2021
- [j48]Saeid Asgari Taghanaki, Kumar Abhishek, Joseph Paul Cohen, Julien Cohen-Adad, Ghassan Hamarneh:
Deep semantic segmentation of natural and medical images: a review. Artif. Intell. Rev. 54(1): 137-178 (2021) - [j47]Charley Gros, Andréanne Lemay, Olivier Vincent, Lucas Rouhier, Marie-Helene Bourget, Anthime Bucquet, Joseph Paul Cohen, Julien Cohen-Adad:
ivadomed: A Medical Imaging Deep Learning Toolbox. J. Open Source Softw. 6(58): 2868 (2021) - [j46]Charley Gros, Andréanne Lemay, Julien Cohen-Adad:
SoftSeg: Advantages of soft versus binary training for image segmentation. Medical Image Anal. 71: 102038 (2021) - [j45]Alexandra Tinnermann, Christian Büchel, Julien Cohen-Adad:
Cortico-spinal imaging to study pain. NeuroImage 224: 117439 (2021) - 2020
- [j44]Agah Karakuzu, Mathieu Boudreau, Tanguy Duval, Tommy Boshkovski, Ilana Leppert, Jean-François Cabana, Ian Gagnon, Pascale Béliveau, G. Bruce Pike, Julien Cohen-Adad, Nikola Stikov:
qMRLab: Quantitative MRI analysis, under one umbrella. J. Open Source Softw. 5(53): 2343 (2020) - [j43]Francesco Grussu, Marco Battiston, Jelle Veraart, Torben Schneider, Julien Cohen-Adad, Timothy M. Shepherd, Daniel C. Alexander, Els Fieremans, Dmitry S. Novikov, Claudia A. M. Gandini Wheeler-Kingshott:
Multi-parametric quantitative in vivo spinal cord MRI with unified signal readout and image denoising. NeuroImage 217: 116884 (2020) - 2019
- [j42]Charley Gros, Benjamin De Leener, Atef Badji, Josefina Maranzano, Dominique Eden, Sara M. Dupont, Jason Talbott, Ren Zhuoquiong, Yaou Liu, Tobias Granberg, Russell Ouellette, Yasuhiko Tachibana, Masaaki Hori, Kouhei Kamiya, Lydia Chougar, Leszek Stawiarz, Jan Hillert, Elise Bannier, Julien Cohen-Adad:
Automatic segmentation of the spinal cord and intramedullary multiple sclerosis lesions with convolutional neural networks. NeuroImage 184: 901-915 (2019) - [j41]Tanguy Duval, Ariane Saliani, Harris Nami, Antonio Nanci, Nikola Stikov, Hugues Leblond, Julien Cohen-Adad:
Axons morphometry in the human spinal cord. NeuroImage 185: 119-128 (2019) - [j40]Atef Badji, Adrián Noriega de la Colina, Agah Karakuzu, Tanguy Duval, Laurence Desjardins-Crépeau, Sven Joubert, Louis Bherer, Maxime Lamarre-Cliche, Nikola Stikov, Hélène Girouard, Julien Cohen-Adad:
Arterial stiffness and white matter integrity in the elderly: A diffusion tensor and magnetization transfer imaging study. NeuroImage 186: 577-585 (2019) - [j39]Christian S. Perone, Pedro L. Ballester, Rodrigo C. Barros, Julien Cohen-Adad:
Unsupervised domain adaptation for medical imaging segmentation with self-ensembling. NeuroImage 194: 1-11 (2019) - [j38]Ariane Saliani, Aldo Zaimi, Harris Nami, Tanguy Duval, Nikola Stikov, Julien Cohen-Adad:
Construction of a rat spinal cord atlas of axon morphometry. NeuroImage 202 (2019) - 2018
- [j37]Charley Gros, Benjamin De Leener, Sara M. Dupont, Allan R. Martin, Michael G. Fehlings, Rohit Bakshi, Subhash Tummala, Vincent Auclair, Donald G. McLaren, Virginie Callot, Julien Cohen-Adad, Michaël Sdika:
Automatic spinal cord localization, robust to MRI contrasts using global curve optimization. Medical Image Anal. 44: 215-227 (2018) - [j36]Benjamin De Leener, Vladimir S. Fonov, D. Louis Collins, Virginie Callot, Nikola Stikov, Julien Cohen-Adad:
PAM50: Unbiased multimodal template of the brainstem and spinal cord aligned with the ICBM152 space. NeuroImage 165: 170-179 (2018) - [j35]Jennifer S. W. Campbell, Ilana R. Leppert, Sridar Narayanan, Mathieu Boudreau, Tanguy Duval, Julien Cohen-Adad, G. Bruce Pike, Nikola Stikov:
Promise and pitfalls of g-ratio estimation with MRI. NeuroImage 182: 80-96 (2018) - [j34]Julien Cohen-Adad:
Microstructural imaging in the spinal cord and validation strategies. NeuroImage 182: 169-183 (2018) - 2017
- [j33]Tom Mingasson, Tanguy Duval, Nikola Stikov, Julien Cohen-Adad:
AxonPacking: An Open-Source Software to Simulate Arrangements of Axons in White Matter. Frontiers Neuroinformatics 11: 5 (2017) - [j32]Tanguy Duval, Simon Lévy, Nikola Stikov, Jennifer S. W. Campbell, Aviv A. Mezer, Thomas Witzel, Boris Keil, V. Smith, Lawrence L. Wald, Eric C. Klawiter, Julien Cohen-Adad:
g-Ratio weighted imaging of the human spinal cord in vivo. NeuroImage 145: 11-23 (2017) - [j31]Benjamin De Leener, Simon Lévy, Sara M. Dupont, Vladimir S. Fonov, Nikola Stikov, D. Louis Collins, Virginie Callot, Julien Cohen-Adad:
SCT: Spinal Cord Toolbox, an open-source software for processing spinal cord MRI data. NeuroImage 145: 24-43 (2017) - [j30]Sara M. Dupont, Benjamin De Leener, Manuel Taso, Arnaud Le Troter, Sylvie Nadeau, Nikola Stikov, Virginie Callot, Julien Cohen-Adad:
Fully-integrated framework for the segmentation and registration of the spinal cord white and gray matter. NeuroImage 150: 358-372 (2017) - [j29]Ferran Prados, John Ashburner, Claudia Blaiotta, Tom Brosch, Julio Carballido-Gamio, Manuel Jorge Cardoso, Benjamin N. Conrad, Esha Datta, Gergely Dávid, Benjamin De Leener, Sara M. Dupont, Patrick Freund, Claudia A. M. Gandini Wheeler-Kingshott, Francesco Grussu, Roland G. Henry, Bennett A. Landman, Emil Ljungberg, Bailey Lyttle, Sébastien Ourselin, Nico Papinutto, Salvatore Saporito, Regina Schlaeger, Seth A. Smith, Paul E. Summers, Roger C. Tam, Marios C. Yiannakas, Alyssa H. Zhu, Julien Cohen-Adad:
Spinal cord grey matter segmentation challenge. NeuroImage 152: 312-329 (2017) - 2016
- [j28]Aldo Zaimi, Tanguy Duval, Alicja Gasecka, Daniel Côté, Nikola Stikov, Julien Cohen-Adad:
AxonSeg: Open Source Software for Axon and Myelin Segmentation and Morphometric Analysis. Frontiers Neuroinformatics 10: 37 (2016) - 2015
- [j27]Susie Yi Huang, Aapo Nummenmaa, Thomas Witzel, Tanguy Duval, Julien Cohen-Adad, Lawrence L. Wald, Jennifer A. McNab:
The impact of gradient strength on in vivo diffusion MRI estimates of axon diameter. NeuroImage 106: 464-472 (2015) - [j26]Manuel Taso, Arnaud Le Troter, Michaël Sdika, Julien Cohen-Adad, Pierre Jean Arnoux, Maxime Guye, Jean-Philippe Ranjeva, Virginie Callot:
A reliable spatially normalized template of the human spinal cord - Applications to automated white matter/gray matter segmentation and tensor-based morphometry (TBM) mapping of gray matter alterations occurring with age. NeuroImage 117: 20-28 (2015) - [j25]Nikola Stikov, Jennifer S. W. Campbell, Thomas Stroh, Mariette Lavelée, Stephen Frey, Jennifer Novek, Stephen Nuara, Ming-Kai Ho, Barry J. Bedell, Robert F. Dougherty, Ilana R. Leppert, Mathieu Boudreau, Sridar Narayanan, Tanguy Duval, Julien Cohen-Adad, Paul-Alexandre Picard, Alicja Gasecka, Daniel Côté, G. Bruce Pike:
In vivo histology of the myelin g-ratio with magnetic resonance imaging. NeuroImage 118: 397-405 (2015) - [j24]Tanguy Duval, Jennifer A. McNab, Kawin Setsompop, Thomas Witzel, Torben Schneider, Susie Yi Huang, Boris Keil, Eric C. Klawiter, Lawrence L. Wald, Julien Cohen-Adad:
In vivo mapping of human spinal cord microstructure at 300 mT/m. NeuroImage 118: 494-507 (2015) - [j23]G. Mangeat, Sindhuja Tirumalai Govindarajan, Caterina Mainero, Julien Cohen-Adad:
Multivariate combination of magnetization transfer, T2* and B0 orientation to study the myelo-architecture of the in vivo human cortex. NeuroImage 119: 89-102 (2015) - [j22]Simon Lévy, M. Benhamou, C. Naaman, Pierre Rainville, Virginie Callot, Julien Cohen-Adad:
White matter atlas of the human spinal cord with estimation of partial volume effect. NeuroImage 119: 262-271 (2015) - [j21]Cornelius Eichner, Stephen F. Cauley, Julien Cohen-Adad, Harald E. Möller, Robert Turner, Kawin Setsompop, Lawrence L. Wald:
Real diffusion-weighted MRI enabling true signal averaging and increased diffusion contrast. NeuroImage 122: 373-384 (2015) - [j20]Benjamin De Leener, Julien Cohen-Adad, Samuel Kadoury:
Automatic Segmentation of the Spinal Cord and Spinal Canal Coupled With Vertebral Labeling. IEEE Trans. Medical Imaging 34(8): 1705-1718 (2015) - 2014
- [j19]Eugénie Ullmann, Jean François Pelletier Paquette, William E. Thong, Julien Cohen-Adad:
Automatic Labeling of Vertebral Levels Using a Robust Template-Based Approach. Int. J. Biomed. Imaging 2014: 719520:1-719520:9 (2014) - [j18]Patrick W. Stroman, Claudia A. M. Wheeler-Kingshott, M. Bacon, J. M. Schwab, Rachael L. Bosma, Jonathan C. W. Brooks, D. W. Cadotte, T. Carlstedt, Olga Ciccarelli, Julien Cohen-Adad, Armin Curt, Nikos Evangelou, Michael G. Fehlings, Massimo Filippi, B. J. Kelley, Spyros S. Kollias, Alex L. MacKay, Carlo A. Porro, Seth A. Smith, S. M. Strittmatter, Paul E. Summers, Irene Tracey:
The current state-of-the-art of spinal cord imaging: Methods. NeuroImage 84: 1070-1081 (2014) - [j17]Claudia A. M. Wheeler-Kingshott, Patrick W. Stroman, J. M. Schwab, M. Bacon, Rachael L. Bosma, Jonathan C. W. Brooks, D. W. Cadotte, T. Carlstedt, Olga Ciccarelli, Julien Cohen-Adad, Armin Curt, Nikos Evangelou, Michael G. Fehlings, Massimo Filippi, B. J. Kelley, Spyros S. Kollias, Alex L. MacKay, Carlo A. Porro, Seth A. Smith, S. M. Strittmatter, Paul E. Summers, Alan J. Thompson, Irene Tracey:
The current state-of-the-art of spinal cord imaging: Applications. NeuroImage 84: 1082-1093 (2014) - [j16]Julien Cohen-Adad:
What can we learn from T2* maps of the cortex? NeuroImage 93: 189-200 (2014) - [j15]Benjamin De Leener, Samuel Kadoury, Julien Cohen-Adad:
Robust, accurate and fast automatic segmentation of the spinal cord. NeuroImage 98: 528-536 (2014) - [j14]Vladimir S. Fonov, Arnaud Le Troter, Manuel Taso, Benjamin De Leener, G. Lévêque, M. Benhamou, Michaël Sdika, Habib Benali, Pierre-Franois Pradat, D. Louis Collins, Virginie Callot, Julien Cohen-Adad:
Framework for integrated MRI average of the spinal cord white and gray matter: The MNI-Poly-AMU template. NeuroImage 102: 817-827 (2014) - 2013
- [j13]Kawin Setsompop, R. Kimmlingen, E. Eberlein, Thomas Witzel, Julien Cohen-Adad, Jennifer A. McNab, Boris Keil, M. Dylan Tisdall, P. Hoecht, Peter Dietz, Stephen F. Cauley, V. Tountcheva, V. Matschl, V. H. Lenz, Keith Heberlein, Andreas Potthast, H. Thein, John D. Van Horn, Arthur W. Toga, F. Schmitt, D. Lehne, Bruce R. Rosen, Van J. Wedeen, Lawrence L. Wald:
Pushing the limits of in vivo diffusion MRI for the Human Connectome Project. NeuroImage 80: 220-233 (2013) - [j12]Jennifer A. McNab, Brian L. Edlow, Thomas Witzel, Susie Yi Huang, Himanshu Bhat, Keith Heberlein, Thorsten Feiweier, Kecheng Liu, Boris Keil, Julien Cohen-Adad, M. Dylan Tisdall, Rebecca D. Folkerth, Hannah C. Kinney, Lawrence L. Wald:
The Human Connectome Project and beyond: Initial applications of 300 mT/m gradients. NeuroImage 80: 234-245 (2013) - 2012
- [j11]Julien Cohen-Adad, Jonathan R. Polimeni, Karl G. Helmer, Thomas Benner, Jennifer A. McNab, Lawrence L. Wald, Bruce R. Rosen, Caterina Mainero:
T2* mapping and B0 orientation-dependence at 7 T reveal cyto- and myeloarchitecture organization of the human cortex. NeuroImage 60(2): 1006-1014 (2012) - [j10]G. Xie, Mathieu Piché, M. Khoshnejad, Vincent Perlbarg, Jen-I Chen, Richard D. Hoge, Habib Benali, Serge Rossignol, Pierre Rainville, Julien Cohen-Adad:
Reduction of physiological noise with independent component analysis improves the detection of nociceptive responses with fMRI of the human spinal cord. NeuroImage 63(1): 245-252 (2012) - [j9]Kawin Setsompop, Julien Cohen-Adad, Borjan A. Gagoski, Tommi Raij, Anastasia Yendiki, Boris Keil, Van J. Wedeen, Lawrence L. Wald:
Improving diffusion MRI using simultaneous multi-slice echo planar imaging. NeuroImage 63(1): 569-580 (2012) - 2011
- [j8]Julien Cohen-Adad, M.-M. El Mendili, Stéphane Lehéricy, Pierre-Franois Pradat, S. Blancho, Serge Rossignol, Habib Benali:
Demyelination and degeneration in the injured human spinal cord detected with diffusion and magnetization transfer MRI. NeuroImage 55(3): 1024-1033 (2011) - [j7]Julien Cohen-Adad, Thomas Benner, Douglas N. Greve, R. P. Kinkel, A. Radding, Bruce Fischl, Bruce R. Rosen, Caterina Mainero:
In vivo evidence of disseminated subpial T2* signal changes in multiple sclerosis at 7 T: A surface-based analysis. NeuroImage 57(1): 55-62 (2011) - [j6]Julien Cohen-Adad, Hugues Leblond, Hugo Delivet-Mongrain, Marina Martinez, Habib Benali, Serge Rossignol:
Wallerian degeneration after spinal cord lesions in cats detected with diffusion tensor imaging. NeuroImage 57(3): 1068-1076 (2011) - 2010
- [j5]Julien Cohen-Adad, Claudine Joëlle Gauthier, Jonathan C. W. Brooks, Marat Slessarev, J. Han, Joseph A. Fisher, Serge Rossignol, Richard D. Hoge:
BOLD signal responses to controlled hypercapnia in human spinal cord. NeuroImage 50(3): 1074-1084 (2010) - 2009
- [j4]Julien Cohen-Adad, Richard D. Hoge, Hugues Leblond, G. Xie, G. Beaudoin, Allen W. Song, Gunnar Krueger, Julien Doyon, Habib Benali, Serge Rossignol:
Investigations on spinal cord fMRI of cats under ketamine. NeuroImage 44(2): 328-339 (2009) - 2008
- [j3]Julien Cohen-Adad, Habib Benali, Richard D. Hoge, Serge Rossignol:
In vivo DTI of the healthy and injured cat spinal cord at high spatial and angular resolution. NeuroImage 40(2): 685-697 (2008) - [j2]Julien Cohen-Adad, Maxime Descoteaux, Serge Rossignol, Richard D. Hoge, Rachid Deriche, Habib Benali:
Detection of multiple pathways in the spinal cord using q-ball imaging. NeuroImage 42(2): 739-749 (2008) - 2007
- [j1]Julien Cohen-Adad, S. Chapuisat, Julien Doyon, Serge Rossignol, Jean-Marc Lina, Habib Benali, Frederic Lesage:
Activation detection in diffuse optical imaging by means of the general linear model. Medical Image Anal. 11(6): 616-629 (2007)
Conference and Workshop Papers
- 2024
- [c16]Arthur Boschet, Armand Collin, Nishka Katoch, Julien Cohen-Adad:
Unpaired Modality Translation for Pseudo Labeling of Histology Images. DGM4MICCAI@MICCAI 2024: 54-63 - 2023
- [c15]Moein Heidari, Amirhossein Kazerouni, Milad Soltany Kadarvish, Reza Azad, Ehsan Khodapanah Aghdam, Julien Cohen-Adad, Dorit Merhof:
HiFormer: Hierarchical Multi-scale Representations Using Transformers for Medical Image Segmentation. WACV 2023: 6191-6201 - 2022
- [c14]Haykel Snoussi, Benoît Combès, Olivier Commowick, Elise Bannier, Anne Kerbrat, Julien Cohen-Adad, Christian Barillot, Emmanuel Caruyer:
Reproducibility and Evolution of Diffusion Mri Measurements Within the Cervical Spinal Cord in Multiple Sclerosis. ISBI 2022: 1-5 - [c13]Reza Azad, Moein Heidari, Julien Cohen-Adad, Ehsan Adeli, Dorit Merhof:
Intervertebral Disc Labeling with Learning Shape Information, a Look once Approach. PRIME@MICCAI 2022: 49-59 - 2021
- [c12]Reza Azad, Lucas Rouhier, Julien Cohen-Adad:
Stacked Hourglass Network with a Multi-level Attention Mechanism: Where to Look for Intervertebral Disc Labeling. MLMI@MICCAI 2021: 406-415 - [c11]Andréanne Lemay, Charley Gros, Olivier Vincent, Yaou Liu, Joseph Paul Cohen, Julien Cohen-Adad:
Benefits of Linear Conditioning for Segmentation using Metadata. MIDL 2021: 416-430 - 2019
- [c10]Haykel Snoussi, Emmanuel Caruyer, Julien Cohen-Adad, Olivier Commowick, Benoît Combès, Elise Bannier, Anne Kerbrat, Christian Barillot:
Geometric Evaluation of Distortion Correction Methods in Diffusion MRI of the Spinal Cord. ISBI 2019: 1696-1699 - [c9]MohammadHossein AskariHemmat, Sina Honari, Lucas Rouhier, Christian S. Perone, Julien Cohen-Adad, Yvon Savaria, Jean-Pierre David:
U-Net Fixed-Point Quantization for Medical Image Segmentation. LABELS/HAL-MICCAI/CuRIOUS@MICCAI 2019: 115-124 - 2018
- [c8]Christian S. Perone, Julien Cohen-Adad:
Deep Semi-supervised Segmentation with Weight-Averaged Consistency Targets. DLMIA/ML-CDS@MICCAI 2018: 12-19 - 2017
- [c7]Adam Porisky, Tom Brosch, Emil Ljungberg, Lisa Y. W. Tang, Youngjin Yoo, Benjamin De Leener, Anthony Traboulsee, Julien Cohen-Adad, Roger C. Tam:
Grey Matter Segmentation in Spinal Cord MRIs via 3D Convolutional Encoder Networks with Shortcut Connections. DLMIA/ML-CDS@MICCAI 2017: 330-337 - [c6]Charley Gros, Benjamin De Leener, Sara M. Dupont, Allan R. Martin, Michael G. Fehlings, Rohit Bakshi, Subhash Tummala, Vincent Auclair, Donald G. McLaren, Virginie Callot, Michaël Sdika, Julien Cohen-Adad:
OptiC: Robust and Automatic Spinal Cord Localization on a Large Variety of MRI Data Using a Distance Transform Based Global Optimization. MICCAI (2) 2017: 712-719 - 2014
- [c5]Benjamin De Leener, Julien Cohen-Adad, Samuel Kadoury:
Automatic 3D segmentation of spinal cord MRI using propagated deformable models. Medical Imaging: Image Processing 2014: 90343R - 2012
- [c4]Berkin Bilgic, Kawin Setsompop, Julien Cohen-Adad, Van J. Wedeen, Lawrence L. Wald, Elfar Adalsteinsson:
Accelerated Diffusion Spectrum Imaging with Compressed Sensing Using Adaptive Dictionaries. MICCAI (3) 2012: 1-9 - 2010
- [c3]Demian Wassennann, Julien Cohen-Adad, Stéphane Lehéricy, Habib Benali, Serge Rossignol, Rachid Deriche:
Straightening the spinal cord using fibre tractography. ISBI 2010: 1377-1380 - 2008
- [c2]Julien Cohen-Adad, Maxime Descoteaux, Serge Rossignol, Richard D. Hoge, Rachid Deriche, Habib Benali:
Detection of multiple pathways in the spinal cord white matter using q-ball imaging. ISBI 2008: 696-699 - 2006
- [c1]Julien Cohen-Adad, Perrine Paul, Xavier Morandi, Pierre Jannin:
Knowledge modeling in image-guided neurosurgery: application in understanding intraoperative brain shift. Medical Imaging: Image-Guided Procedures 2006: 61412E
Informal and Other Publications
- 2024
- [i29]Jan Valosek, Theo Mathieu, Raphaelle Schlienger, Olivia S. Kowalczyk, Julien Cohen-Adad:
Automatic Segmentation of the Spinal Cord Nerve Rootlets. CoRR abs/2402.00724 (2024) - [i28]Julien Cohen-Adad:
Open Source in Lab Management. CoRR abs/2405.07774 (2024) - [i27]Enamundram Naga Karthik, Jan Valosek, Lynn Farner, Dario Pfyffer, Simon Schading-Sassenhausen, Anna Lebret, Gergely Dávid, Andrew C. Smith, Kenneth A. Weber II, Maryam Seif, RHSCIR Network Imaging Group, Patrick Freund, Julien Cohen-Adad:
SCIsegV2: A Universal Tool for Segmentation of Intramedullary Lesions in Spinal Cord Injury. CoRR abs/2407.17265 (2024) - [i26]Armand Collin, Arthur Boschet, Mathieu Boudreau, Julien Cohen-Adad:
Multi-Domain Data Aggregation for Axon and Myelin Segmentation in Histology Images. CoRR abs/2409.11552 (2024) - 2023
- [i25]Reza Azad, Yiwei Jia, Ehsan Khodapanah Aghdam, Julien Cohen-Adad, Dorit Merhof:
Enhancing Medical Image Segmentation with TransCeption: A Multi-Scale Feature Fusion Approach. CoRR abs/2301.10847 (2023) - [i24]Sandrine Bédard, Enamundram Naga Karthik, Charidimos Tsagkas, Emanuele Pravatà, Cristina Granziera, Andrew Smith, Kenneth Arnold Weber II, Julien Cohen-Adad:
Towards contrast-agnostic soft segmentation of the spinal cord. CoRR abs/2310.15402 (2023) - 2022
- [i23]Andréanne Lemay, Charley Gros, Julien Cohen-Adad:
Label fusion and training methods for reliable representation of inter-rater uncertainty. CoRR abs/2202.07550 (2022) - [i22]Reza Azad, Nika Khosravi, Mohammad Dehghanmanshadi, Julien Cohen-Adad, Dorit Merhof:
Medical Image Segmentation on MRI Images with Missing Modalities: A Review. CoRR abs/2203.06217 (2022) - [i21]Reza Azad, Moein Heidari, Julien Cohen-Adad, Ehsan Adeli, Dorit Merhof:
Intervertebral Disc Labeling With Learning Shape Information, A Look Once Approach. CoRR abs/2204.02943 (2022) - [i20]Moein Heidari, Amirhossein Kazerouni, Milad Soltany Kadarvish, Reza Azad, Ehsan Khodapanah Aghdam, Julien Cohen-Adad, Dorit Merhof:
HiFormer: Hierarchical Multi-scale Representations Using Transformers for Medical Image Segmentation. CoRR abs/2207.08518 (2022) - [i19]Enamundram Naga Karthik, Anne Kerbrat, Pierre Labauge, Tobias Granberg, Jason Talbott, Daniel S. Reich, Massimo Filippi, Rohit Bakshi, Virginie Callot, Sarath Chandar, Julien Cohen-Adad:
Segmentation of Multiple Sclerosis Lesions across Hospitals: Learn Continually or Train from Scratch? CoRR abs/2210.15091 (2022) - 2021
- [i18]Andréanne Lemay, Charley Gros, Olivier Vincent, Yaou Liu, Joseph Paul Cohen, Julien Cohen-Adad:
Benefits of Linear Conditioning for Segmentation using Metadata. CoRR abs/2102.09582 (2021) - [i17]Olivier Vincent, Charley Gros, Julien Cohen-Adad:
Impact of individual rater style on deep learning uncertainty in medical imaging segmentation. CoRR abs/2105.02197 (2021) - [i16]Reza Azad, Lucas Rouhier, Julien Cohen-Adad:
Stacked Hourglass Network with a Multi-level Attention Mechanism: Where to Look for Intervertebral Disc Labeling. CoRR abs/2108.06554 (2021) - [i15]Uzay Macar, Enamundram Naga Karthik, Charley Gros, Andréanne Lemay, Julien Cohen-Adad:
Team NeuroPoly: Description of the Pipelines for the MICCAI 2021 MS New Lesions Segmentation Challenge. CoRR abs/2109.05409 (2021) - [i14]Nilser J. Laines Medina, Charley Gros, Julien Cohen-Adad, Virginie Callot, Arnaud Le Troter:
2D Multi-Class Model for Gray and White Matter Segmentation of the Cervical Spinal Cord at 7T. CoRR abs/2110.06516 (2021) - 2020
- [i13]Olivier Vincent, Charley Gros, Joseph Paul Cohen, Julien Cohen-Adad:
Automatic segmentation of spinal multiple sclerosis lesions: How to generalize across MRI contrasts? CoRR abs/2003.04377 (2020) - [i12]Lucas Rouhier, Francisco Perdigón Romero, Joseph Paul Cohen, Julien Cohen-Adad:
Spine intervertebral disc labeling using a fully convolutional redundant counting model. CoRR abs/2003.04387 (2020) - [i11]Charley Gros, Andréanne Lemay, Olivier Vincent, Lucas Rouhier, Anthime Bucquet, Joseph Paul Cohen, Julien Cohen-Adad:
ivadomed: A Medical Imaging Deep Learning Toolbox. CoRR abs/2010.09984 (2020) - [i10]Charley Gros, Andréanne Lemay, Julien Cohen-Adad:
SoftSeg: Advantages of soft versus binary training for image segmentation. CoRR abs/2011.09041 (2020) - [i9]Andréanne Lemay, Charley Gros, Zhizheng Zhuo, Jie Zhang, Yunyun Duan, Julien Cohen-Adad, Yaou Liu:
Multiclass Spinal Cord Tumor Segmentation on MRI with Deep Learning. CoRR abs/2012.12820 (2020) - 2019
- [i8]Melanie Lubrano di Scandalea, Christian S. Perone, Mathieu Boudreau, Julien Cohen-Adad:
Deep Active Learning for Axon-Myelin Segmentation on Histology Data. CoRR abs/1907.05143 (2019) - [i7]MohammadHossein AskariHemmat, Sina Honari, Lucas Rouhier, Christian S. Perone, Julien Cohen-Adad, Yvon Savaria, Jean-Pierre David:
U-Net Fixed-Point Quantization for Medical Image Segmentation. CoRR abs/1908.01073 (2019) - [i6]Saeid Asgari Taghanaki, Kumar Abhishek, Joseph Paul Cohen, Julien Cohen-Adad, Ghassan Hamarneh:
Deep Semantic Segmentation of Natural and Medical Images: A Review. CoRR abs/1910.07655 (2019) - 2018
- [i5]Charley Gros, Benjamin De Leener, Atef Badji, Josefina Maranzano, Dominique Eden, Sara M. Dupont, Jason Talbott, Ren Zhuoquiong, Yaou Liu, Tobias Granberg, Russell Ouellette, Yasuhiko Tachibana, Masaaki Hori, Kouhei Kamiya, Lydia Chougar, Leszek Stawiarz, Jan Hillert, Elise Bannier, Anne Kerbrat, Gilles Edan, Pierre Labauge, Virginie Callot, Jean Pelletier, Bertrand Audoin, Henitsoa Rasoanandrianina, Jean-Christophe Brisset, Paola Valsasina, Maria Assunta Rocca, Massimo Filippi, Rohit Bakshi, Shahamat Tauhid, Ferran Prados, Marios C. Yiannakas, Hugh Kearney, Olga Ciccarelli, Seth A. Smith, Constantina Andrada Treaba, Caterina Mainero, Jennifer Lefeuvre, Daniel S. Reich, Govind Nair, Vincent Auclair, Donald G. McLaren, Allan R. Martin, Michael G. Fehlings, Shahabeddin Vahdat, Ali Khatibi, Julien Doyon, Timothy M. Shepherd, Erik Charlson, Sridar Narayanan, Julien Cohen-Adad:
Automatic segmentation of the spinal cord and intramedullary multiple sclerosis lesions with convolutional neural networks. CoRR abs/1805.06349 (2018) - [i4]Christian S. Perone, Julien Cohen-Adad:
Deep semi-supervised segmentation with weight-averaged consistency targets. CoRR abs/1807.04657 (2018) - [i3]Christian S. Perone, Pedro L. Ballester, Rodrigo C. Barros, Julien Cohen-Adad:
Unsupervised domain adaptation for medical imaging segmentation with self-ensembling. CoRR abs/1811.06042 (2018) - 2017
- [i2]Christian S. Perone, Evan Calabrese, Julien Cohen-Adad:
Spinal cord gray matter segmentation using deep dilated convolutions. CoRR abs/1710.01269 (2017) - [i1]Aldo Zaimi, Maxime Wabartha, Victor Herman, Pierre-Louis Antonsanti, Christian Samuel Perone, Julien Cohen-Adad:
AxonDeepSeg: automatic axon and myelin segmentation from microscopy data using convolutional neural networks. CoRR abs/1711.01004 (2017)
Coauthor Index
Claudia A. M. Gandini Wheeler-Kingshott
aka: Claudia A. M. Wheeler-Kingshott
aka: Claudia A. M. Wheeler-Kingshott
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