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Theodore D. Satterthwaite
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2020 – today
- 2023
- [j38]Hongming Li, Dhivya Srinivasan, Chuanjun Zhuo, Zaixu Cui, Raquel E. Gur, Ruben C. Gur, Desmond J. Oathes, Christos Davatzikos, Theodore D. Satterthwaite, Yong Fan:
Computing personalized brain functional networks from fMRI using self-supervised deep learning. Medical Image Anal. 85: 102756 (2023) - [j37]Zhen Zhou, Hongming Li, Dhivya Srinivasan, Ahmed Abdulkadir, Ilya M. Nasrallah, Junhao Wen, Jimit Doshi, Güray Erus, Elizabeth Mamourian, R. Nick Bryan, David A. Wolk, Lori L. Beason-Held, Susan M. Resnick, Theodore D. Satterthwaite, Christos Davatzikos, Haochang Shou, Yong Fan:
Multiscale functional connectivity patterns of the aging brain learned from harmonized rsfMRI data of the multi-cohort iSTAGING study. NeuroImage 269: 119911 (2023) - [j36]Chenying Zhao, Tinashe M. Tapera, Joëlle Bagautdinova, Josiane Bourque, Sydney Covitz, Raquel E. Gur, Ruben C. Gur, Bart Larsen, Kahini Mehta, Steven L. Meisler, Kristin Murtha, John Muschelli, David R. Roalf, Valerie J. Sydnor, Alessandra M. Valcarcel, Russell T. Shinohara, Matthew Cieslak, Theodore D. Satterthwaite:
ModelArray: An R package for statistical analysis of fixel-wise data. NeuroImage 271: 120037 (2023) - [j35]Fengling Hu, Andrew A. Chen, Hannah Horng, Vishnu Bashyam, Christos Davatzikos, Aaron Alexander-Bloch, Mingyao Li, Haochang Shou, Theodore D. Satterthwaite, Meichen Yu, Russell T. Shinohara:
Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization. NeuroImage 274: 120125 (2023) - [j34]Lennart Frahm, Theodore D. Satterthwaite, Peter T. Fox, Robert Langner, Simon B. Eickhoff:
ALE meta-analyses of voxel-based morphometry studies: Parameter validation via large-scale simulations. NeuroImage 281: 120383 (2023) - 2022
- [j33]Junhao Wen, Erdem Varol, Aristeidis Sotiras, Zhijian Yang, Ganesh B. Chand, Güray Erus, Haochang Shou, Ahmed Abdulkadir, Gyujoon Hwang, Dominic B. Dwyer, Alessandro Pigoni, Paola Dazzan, René S. Kahn, Hugo G. Schnack, Marcus V. Zanetti, Eva Meisenzahl, Geraldo F. Busatto, Benedicto Crespo-Facorro, Romero-Garcia Rafael, Christos Pantelis, Stephen J. Wood, Chuanjun Zhuo, Russell T. Shinohara, Yong Fan, Ruben C. Gur, Raquel E. Gur, Theodore D. Satterthwaite, Nikolaos Koutsouleris, Daniel H. Wolf, Christos Davatzikos:
Multi-scale semi-supervised clustering of brain images: Deriving disease subtypes. Medical Image Anal. 75: 102304 (2022) - [j32]Andrew A. Chen, Dhivya Srinivasan, Raymond Pomponio, Yong Fan, Ilya M. Nasrallah, Susan M. Resnick, Lori L. Beason-Held, Christos Davatzikos, Theodore D. Satterthwaite, Dani S. Bassett, Russell T. Shinohara, Haochang Shou:
Harmonizing functional connectivity reduces scanner effects in community detection. NeuroImage 256: 119198 (2022) - [j31]Huseyin O. Taskin, Yuchuan Qiao, Valerie J. Sydnor, Matthew Cieslak, Edda B. Haggerty, Theodore D. Satterthwaite, Jessica I. W. Morgan, Yonggang Shi, Geoffrey Karl Aguirre:
Retinal ganglion cell endowment is correlated with optic tract fiber cross section, not density. NeuroImage 260: 119495 (2022) - [j30]Sydney Covitz, Tinashe M. Tapera, Azeez Adebimpe, Aaron Alexander-Bloch, Maxwell A. Bertolero, Eric Feczko, Alexandre R. Franco, Raquel E. Gur, Ruben C. Gur, Timothy Hendrickson, Audrey Houghton, Kahini Mehta, Kristin Murtha, Anders Perrone, Tim Robert-Fitzgerald, Jenna M. Schabdach, Russell T. Shinohara, Jacob W. Vogel, Chenying Zhao, Damien A. Fair, Michael P. Milham, Matthew Cieslak, Theodore D. Satterthwaite:
Curation of BIDS (CuBIDS): A workflow and software package for streamlining reproducible curation of large BIDS datasets. NeuroImage 263: 119609 (2022) - [j29]Sara Weinstein, Simon N. Vandekar, Erica B. Baller, Danni Tu, Azeez Adebimpe, Tinashe M. Tapera, Ruben C. Gur, Raquel E. Gur, John A. Detre, Armin Raznahan, Aaron Alexander-Bloch, Theodore D. Satterthwaite, Russell T. Shinohara, Jun Young Park:
Spatially-enhanced clusterwise inference for testing and localizing intermodal correspondence. NeuroImage 264: 119712 (2022) - 2021
- [j28]Tinashe M. Tapera, Matthew Cieslak, Max Bertolero, Azeez Adebimpe, Geoffrey Karl Aguirre, Ellyn R. Butler, Philip A. Cook, Diego Davila, Mark A. Elliott, Sophia Linguiti, Kristin Murtha, William Tackett, John A. Detre, Theodore D. Satterthwaite:
FlywheelTools: Data Curation and Manipulation on the Flywheel Platform. Frontiers Neuroinformatics 15: 678403 (2021) - [j27]Dushyant Sahoo, Theodore D. Satterthwaite, Christos Davatzikos:
Hierarchical Extraction of Functional Connectivity Components in Human Brain Using Resting-State fMRI. IEEE Trans. Medical Imaging 40(3): 940-950 (2021) - 2020
- [j26]Raymond Pomponio, Güray Erus, Mohamad Habes, Jimit Doshi, Dhivya Srinivasan, Elizabeth Mamourian, Vishnu Bashyam, Ilya M. Nasrallah, Theodore D. Satterthwaite, Yong Fan, Lenore J. Launer, Colin L. Masters, Paul Maruff, Chuanjun Zhuo, Henry Völzke, Sterling C. Johnson, Jurgen Fripp, Nikolaos Koutsouleris, Christos Davatzikos:
Harmonization of large MRI datasets for the analysis of brain imaging patterns throughout the lifespan. NeuroImage 208: 116450 (2020) - [j25]Hao-Ting Wang, Jonathan Smallwood, Janaina Mourão Miranda, Cedric Huchuan Xia, Theodore D. Satterthwaite, Danielle S. Bassett, Danilo Bzdok:
Finding the needle in a high-dimensional haystack: Canonical correlation analysis for neuroscientists. NeuroImage 216: 116745 (2020) - [j24]Julia Wrobel, M. L. Martin, Rohit Bakshi, Peter A. Calabresi, M. Elliot, David R. Roalf, Ruben C. Gur, Raquel E. Gur, Roland G. Henry, Govind Nair, Jiwon Oh, Nico Papinutto, Daniel Pelletier, Daniel S. Reich, W. D. Rooney, Theodore D. Satterthwaite, William Stern, Karthik Prabhakaran, Jeff Goldsmith:
Intensity warping for multisite MRI harmonization. NeuroImage 223: 117242 (2020) - [c11]Evangelos Sariyanidi, Casey J. Zampella, G. Keith Bartley, John D. Herrington, Theodore D. Satterthwaite, Robert T. Schultz, Birkan Tunç:
Discovering Synchronized Subsets of Sequences: A Large Scale Solution. CVPR 2020: 9490-9499 - [i4]Vishnu M. Bashyam, Jimit Doshi, Güray Erus, Dhivya Srinivasan, Ahmed Abdulkadir, Mohamad Habes, Yong Fan, Colin L. Masters, Paul Maruff, Chuanjun Zhuo, Henry Völzke, Sterling C. Johnson, Jurgen Fripp, Nikolaos Koutsouleris, Theodore D. Satterthwaite, Daniel H. Wolf, Raquel E. Gur, Ruben C. Gur, John C. Morris, Marilyn S. Albert, Hans Jörgen Grabe, Susan M. Resnick, R. Nick Bryan, David A. Wolk, Haochang Shou, Ilya M. Nasrallah, Christos Davatzikos:
Medical Image Harmonization Using Deep Learning Based Canonical Mapping: Toward Robust and Generalizable Learning in Imaging. CoRR abs/2010.05355 (2020)
2010 – 2019
- 2019
- [j23]Eli J. Cornblath, Evelyn Tang, Graham L. Baum, Tyler M. Moore, Azeez Adebimpe, David R. Roalf, Ruben C. Gur, Raquel E. Gur, Fabio Pasqualetti, Theodore D. Satterthwaite, Danielle S. Bassett:
Sex differences in network controllability as a predictor of executive function in youth. NeuroImage 188: 122-134 (2019) - [j22]Yusuf Osmanlioglu, Birkan Tunç, Drew Parker, Mark A. Elliott, Graham L. Baum, Rastko Ciric, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur, Ragini Verma:
System-level matching of structural and functional connectomes in the human brain. NeuroImage 199: 93-104 (2019) - 2018
- [j21]John D. Medaglia, Theodore D. Satterthwaite, Apoorva Kelkar, Rastko Ciric, Tyler M. Moore, Kosha Ruparel, Ruben C. Gur, Raquel E. Gur, Danielle S. Bassett:
Brain state expression and transitions are related to complex executive cognition in normative neurodevelopment. NeuroImage 166: 293-306 (2018) - [j20]Adon F. G. Rosen, David R. Roalf, Kosha Ruparel, Jason Blake, Kevin Seelaus, Lakshmi P. Villa, Rastko Ciric, Philip A. Cook, Christos Davatzikos, Mark A. Elliott, Angel Garcia de La Garza, Efstathios D. Gennatas, Megan Quarmley, J. Eric Schmitt, Russell T. Shinohara, M. Dylan Tisdall, R. Cameron Craddock, Raquel E. Gur, Theodore D. Satterthwaite:
Quantitative assessment of structural image quality. NeuroImage 169: 407-418 (2018) - [j19]Pranav G. Reddy, Marcelo Gomes Mattar, Andrew C. Murphy, Nicholas F. Wymbs, Scott T. Grafton, Theodore D. Satterthwaite, Danielle S. Bassett:
Brain state flexibility accompanies motor-skill acquisition. NeuroImage 171: 135-147 (2018) - [j18]Graham L. Baum, David R. Roalf, Philip A. Cook, Rastko Ciric, Adon F. G. Rosen, Cedric Xia, Mark A. Elliott, Kosha Ruparel, Ragini Verma, Birkan Tunç, Ruben C. Gur, Raquel E. Gur, Danielle S. Bassett, Theodore D. Satterthwaite:
The impact of in-scanner head motion on structural connectivity derived from diffusion MRI. NeuroImage 173: 275-286 (2018) - [j17]Aaron Alexander-Bloch, Haochang Shou, Siyuan Liu, Theodore D. Satterthwaite, David C. Glahn, Russell T. Shinohara, Simon N. Vandekar, Armin Raznahan:
On testing for spatial correspondence between maps of human brain structure and function. NeuroImage 178: 540-551 (2018) - [c10]Hongming Li, Theodore D. Satterthwaite, Yong Fan:
Brain age prediction based on resting-state functional connectivity patterns using convolutional neural networks. ISBI 2018: 101-104 - [c9]Alessandra M. Valcarcel, Kristin A. Linn, Fariha Khalid, Simon N. Vandekar, Shahamat Tauhid, Theodore D. Satterthwaite, John Muschelli, Rohit Bakshi, Russell T. Shinohara:
MIMoSA: An Approach to Automatically Segment T2 Hyperintense and T1 Hypointense Lesions in Multiple Sclerosis. BrainLes@MICCAI (1) 2018: 47-56 - [i3]Hongming Li, Theodore D. Satterthwaite, Yong Fan:
Brain Age Prediction Based on Resting-State Functional Connectivity Patterns Using Convolutional Neural Networks. CoRR abs/1801.04013 (2018) - [i2]Eli J. Cornblath, Evelyn Tang, Graham L. Baum, Tyler M. Moore, David R. Roalf, Ruben C. Gur, Raquel E. Gur, Fabio Pasqualetti, Theodore D. Satterthwaite, Danielle S. Bassett:
Sex differences in network controllability as a predictor of executive function in youth. CoRR abs/1801.04623 (2018) - [i1]Hao-Ting Wang, Jonathan Smallwood, Janaina Mourão Miranda, Cedric Huchuan Xia, Theodore D. Satterthwaite, Danielle S. Bassett, Danilo Bzdok:
Finding the needle in high-dimensional haystack: A tutorial on canonical correlation analysis. CoRR abs/1812.02598 (2018) - 2017
- [j16]Rastko Ciric, Daniel H. Wolf, Jonathan D. Power, David R. Roalf, Graham L. Baum, Kosha Ruparel, Russell T. Shinohara, Mark A. Elliott, Simon B. Eickhoff, Christos Davatzikos, Ruben C. Gur, Raquel E. Gur, Danielle S. Bassett, Theodore D. Satterthwaite:
Benchmarking of participant-level confound regression strategies for the control of motion artifact in studies of functional connectivity. NeuroImage 154: 174-187 (2017) - [j15]Hongming Li, Theodore D. Satterthwaite, Yong Fan:
Large-scale sparse functional networks from resting state fMRI. NeuroImage 156: 1-13 (2017) - [j14]Jean-Philippe Fortin, Drew Parker, Birkan Tunç, Takanori Watanabe, Mark A. Elliott, Kosha Ruparel, David R. Roalf, Theodore D. Satterthwaite, Ruben C. Gur, Raquel E. Gur, Robert T. Schultz, Ragini Verma, Russell T. Shinohara:
Harmonization of multi-site diffusion tensor imaging data. NeuroImage 161: 149-170 (2017) - 2016
- [j13]Theodore D. Satterthwaite, John J. Connolly, Kosha Ruparel, Monica E. Calkins, Chad Jackson, Mark A. Elliott, David R. Roalf, Karthik Prabhakaran, Ryan Hopson, Meckenzie Behr, Haijun Qiu, Frank D. Mentch, Rosetta Chiavacci, Patrick Sleiman, Ruben C. Gur, Hakon Hakonarson, Raquel E. Gur:
The Philadelphia Neurodevelopmental Cohort: A publicly available resource for the study of normal and abnormal brain development in youth. NeuroImage 124: 1115-1119 (2016) - [j12]David R. Roalf, Megan Quarmley, Mark A. Elliott, Theodore D. Satterthwaite, Simon N. Vandekar, Kosha Ruparel, Efstathios D. Gennatas, Monica E. Calkins, Tyler M. Moore, Ryan Hopson, Karthik Prabhakaran, Chad Jackson, Ragini Verma, Hakon Hakonarson, Ruben C. Gur, Raquel E. Gur:
The impact of quality assurance assessment on diffusion tensor imaging outcomes in a large-scale population-based cohort. NeuroImage 125: 903-919 (2016) - [j11]Jimit Doshi, Güray Erus, Yangming Ou, Susan M. Resnick, Ruben C. Gur, Raquel E. Gur, Theodore D. Satterthwaite, Susan Furth, Christos Davatzikos:
MUSE: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters, and locally optimal atlas selection. NeuroImage 127: 186-195 (2016) - [j10]Kristin A. Linn, Bilwaj Gaonkar, Theodore D. Satterthwaite, Jimit Doshi, Christos Davatzikos, Russell T. Shinohara:
Control-group feature normalization for multivariate pattern analysis of structural MRI data using the support vector machine. NeuroImage 132: 157-166 (2016) - [j9]Simon N. Vandekar, Russell T. Shinohara, Armin Raznahan, Ryan Hopson, David R. Roalf, Kosha Ruparel, Ruben C. Gur, Raquel E. Gur, Theodore D. Satterthwaite:
Subject-level measurement of local cortical coupling. NeuroImage 133: 88-97 (2016) - [c8]Hongming Li, Ted Satterthwaite, Yong Fan:
Identification of subject-specific brain functional networks using a collaborative sparse nonnegative matrix decomposition method. ISBI 2016: 984-987 - 2015
- [j8]Harini Eavani, Theodore D. Satterthwaite, Roman Filipovych, Raquel E. Gur, Ruben C. Gur, Christos Davatzikos:
Identifying Sparse Connectivity Patterns in the brain using resting-state fMRI. NeuroImage 105: 286-299 (2015) - [j7]Nicolas Honnorat, Harini Eavani, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur, Christos Davatzikos:
GraSP: Geodesic Graph-based Segmentation with Shape Priors for the functional parcellation of the cortex. NeuroImage 106: 207-221 (2015) - 2014
- [j6]Theodore D. Satterthwaite, Mark A. Elliott, Kosha Ruparel, James Loughead, Karthik Prabhakaran, Monica E. Calkins, Ryan Hopson, Chad Jackson, Jack Keefe, Marisa Riley, Frank D. Mentch, Patrick Sleiman, Ragini Verma, Christos Davatzikos, Hakon Hakonarson, Ruben C. Gur, Raquel E. Gur:
Neuroimaging of the Philadelphia Neurodevelopmental Cohort. NeuroImage 86: 544-553 (2014) - [c7]Harini Eavani, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur, Christos Davatzikos:
Discriminative Sparse Connectivity Patterns for Classification of fMRI Data. MICCAI (3) 2014: 193-200 - 2013
- [j5]Theodore D. Satterthwaite, Mark A. Elliott, Raphael T. Gerraty, Kosha Ruparel, James Loughead, Monica E. Calkins, Simon B. Eickhoff, Hakon Hakonarson, Ruben C. Gur, Raquel E. Gur, Daniel H. Wolf:
An improved framework for confound regression and filtering for control of motion artifact in the preprocessing of resting-state functional connectivity data. NeuroImage 64: 240-256 (2013) - [j4]Theodore D. Satterthwaite, Daniel H. Wolf, Kosha Ruparel, Güray Erus, Mark A. Elliott, Simon B. Eickhoff, Efstathios D. Gennatas, Chad Jackson, Karthik Prabhakaran, Alex R. Smith, Hakon Hakonarson, Ragini Verma, Christos Davatzikos, Raquel E. Gur, Ruben C. Gur:
Heterogeneous impact of motion on fundamental patterns of developmental changes in functional connectivity during youth. NeuroImage 83: 45-57 (2013) - [c6]Harini Eavani, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur, Christos Davatzikos:
Unsupervised Learning of Functional Network Dynamics in Resting State fMRI. IPMI 2013: 426-437 - [c5]Harini Eavani, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur, Christos Davatzikos:
Identifying patterns in temporal variation of functional connectivity using resting state FMRI. ISBI 2013: 1086-1089 - [c4]Nicolas Honnorat, Harini Eavani, Theodore D. Satterthwaite, Christos Davatzikos:
A Graph-Based Brain Parcellation Method Extracting Sparse Networks. PRNI 2013: 157-160 - [c3]Tianhao Zhang, Theodore D. Satterthwaite, Christos Davatzikos:
ODVBA-C: Optimally-Discriminative Voxel-Based Analysis of Continuous Variables. PRNI 2013: 161-164 - 2012
- [j3]Theodore D. Satterthwaite, Daniel H. Wolf, James Loughead, Kosha Ruparel, Mark A. Elliott, Hakon Hakonarson, Ruben C. Gur, Raquel E. Gur:
Impact of in-scanner head motion on multiple measures of functional connectivity: Relevance for studies of neurodevelopment in youth. NeuroImage 60(1): 623-632 (2012) - [j2]Theodore D. Satterthwaite, Kosha Ruparel, James Loughead, Mark A. Elliott, Raphael T. Gerraty, Monica E. Calkins, Hakon Hakonarson, Ruben C. Gur, Raquel E. Gur, Daniel H. Wolf:
Being right is its own reward: Load and performance related ventral striatum activation to correct responses during a working memory task in youth. NeuroImage 61(3): 723-729 (2012) - [c2]Tianhao Zhang, Theodore D. Satterthwaite, Mark A. Elliott, Ruben C. Gur, Raquel E. Gur, Christos Davatzikos:
Multivariate fMRI Analysis Using Optimally-discriminative Voxel-based Analysis. PRNI 2012: 33-36 - [c1]Harini Eavani, Roman Filipovych, Christos Davatzikos, Theodore D. Satterthwaite, Raquel E. Gur, Ruben C. Gur:
Sparse Dictionary Learning of Resting State fMRI Networks. PRNI 2012: 73-76
2000 – 2009
- 2007
- [j1]Theodore D. Satterthwaite, Leonard Green, Joel Myerson, Jamie Parker, Mohana Ramaratnam, Randy L. Buckner:
Dissociable but inter-related systems of cognitive control and reward during decision making: Evidence from pupillometry and event-related fMRI. NeuroImage 37(3): 1017-1031 (2007)
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