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ISBI 2013: San Francisco, CA, USA
- 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2013, 7-11 April, 2013, San Francisco, CA, USA, Proceedings. IEEE 2013, ISBN 978-1-4673-6454-6
Compressive Sensing in MRI
- Bo Zhao
, Fan Lam, Wenmiao Lu, Zhi-Pei Liang:
Model-based MR parameter mapping with sparsity constraint. 1-4 - Sajan Goud Lingala
, Mathews Jacob
:
Blind compressed sensing with sparse dictionaries for accelerated dynamic MRI. 5-8 - Suyash P. Awate
, Edward V. R. DiBella
:
Compressed sensing HARDI via rotation-invariant concise dictionaries, flexible K-space undersampling, and multiscale spatial regularity. 9-12 - Jana Hutter
, Robert Grimm
, Christoph Forman, Andreas Greiser, Joachim Hornegger, Peter Schmitt:
Multi-dimensional flow-adapted compressed sensing (MDFCS) for time-resolved velocity-encoded Phase Contrast MRA. 13-16 - Saiprasad Ravishankar, Yoram Bresler
:
Sparsifying transform learning for Compressed Sensing MRI. 17-20
Interventional Imaging, Image-Guided Surgery and Planning
- Shih-Yu Sun, Matthew W. Gilbertson, Brian W. Anthony:
Computer-guided ultrasound probe realignment by optical tracking. 21-24 - Xianliang Wu, Richard James Housden
, Niharika Varma, YingLiang Ma
, Daniel Rueckert
, Kawal S. Rhode
:
Catheter tracking in 3D echocardiographic sequences based on tracking in 2D X-ray sequences for cardiac catheterization interventions. 25-28 - Devis Peressutti, Graeme P. Penney, Christoph Kolbitsch, Richard James Housden
, Alberto Gómez, Kawal S. Rhode
, Andrew P. King:
A framework for automatic model-driven 2D echocardiography acquisition for robust respiratory motion estimation in image-guided cardiac interventions. 29-32 - Martin Koch, Andreas Kleinoeder, Felix Bourier, Joachim Hornegger, Norbert Strobel:
Novel method for comparison of pre-planned ablation lines for treatment of atrial fibrillation using a common reference model. 33-36 - Kunlin Cao, David M. Mills, Kedar A. Patwardhan:
Automated catheter detection in volumetric ultrasound. 37-40
Active Contours, Shapes, Level Set Methods
- Fahmi Khalifa
, Garth M. Beache, Ahmed Elnakib
, Hisham Sliman, Georgy L. Gimel'farb
, Karla Conn Welch, Ayman El-Baz
:
A new shape-based framework for the left ventricle wall segmentation from cardiac first-pass perfusion mri. 41-44 - Balázs Harangi
, András Hajdu
:
Improving automatic exudate detection based on the fusion of the results of multiple active contours. 45-48 - Chuyang Ye, John A. Bogovic, Sarah H. Ying, Jerry L. Prince:
Segmentation of the complete superior cerebellar peduncles using a multi-object geometric deformable model. 49-52 - Dimitrios Zarpalas, Polyxeni Gkontra
, Petros Daras
, Nikolaos Maglaveras
:
Hippocampus segmentation through gradient based reliability maps for local blending of ACM energy terms. 53-56 - Saurabh Vyas, Ryan Mukherjee, Federico Sosa, Philippe Burlina:
Endocardium segmentation in 3D Transesophageal Echocardiography. 57-60 - Vincent Jaouen
, Paulo González
, Simon Stute, Denis Guilloteau, Irène Buvat, Clovis Tauber:
Vector-based active surfaces for segmentation of dynamic PET images. 61-64 - Mariem Gargouri, Julien Tierny, Erwan Jolivet, Philippe Petit, Elsa D. Angelini
:
Accurate and robust shape descriptors for the identification of RIB cage structures in CT-images with Random Forests. 65-68 - Carlos S. Mendoza, Xin Kang, Nabile M. Safdar, Emmarie Myers, Craig A. Peters
, Marius George Linguraru:
Kidney segmentation in ultrasound via genetic initialization and Active Shape Models with rotation correction. 69-72 - Nóirín Duggan, Hayden Schaeffer
, Carole Le Guyader, Edward Jones
, Martin Glavin
, Luminita A. Vese:
Boundary detection in echocardiography using a Split Bregman edge detector and a topology preserving level set approach. 73-76 - Pavan Annangi, Navneeth Subramanian, Satish C. Govind, Gokul Swamy, Brian Young:
Automated posteriorwall thickness measurement from B-mode ultrasound. 77-80 - Amal A. Farag:
Variational approach for small-size lung nodule segmentation. 81-84
Shape Modeling and Analysis
- Xiang Yu, Hanbo Chen, Tuo Zhang, Xintao Hu
, Lei Guo, Tianming Liu:
Joint analysis of gyral folding and fiber shape patterns. 85-88 - Mohamed S. Hefny, Randy E. Ellis:
A statistical shape model of femoral head-neck cross sections using principal tangent components. 89-92 - Shireen Y. Elhabian
, Aly S. Abdelrahim, Amal A. Farag, David Tasman, Wael Aboelmaaty
, Allan G. Farman:
Clinical crowns shape reconstruction - An image-based approach. 93-96 - Cristian Lorenz, Thomas Netsch, Tobias Klinder, Dirk Müller, Thomas Baum
, Jan S. Bauer, Peter B. Noël:
Change assessment for CT spine imaging. 97-100 - Mohammad Mayya, Sergii Poltaretskyi, Chafiaâ Hamitouche, Jean Chaoui:
Scapula Statistical Shape Model construction based on watershed segmentation and elastic registration. 101-104 - Qi Song, V. Srikrishnan, Bipul Das, Roshni R. Bhagalia:
Cardiac localization in topograms using hierarchical models. 105-108
Quantification of Organs and Disease 1
- Pascale Beliveau
, Farida Cheriet, Stasia A. Anderson, Joni Taylor, Stephen Berul, Andrew E. Arai
, Li-yueh Hsu:
Textural analysis of diffuse myocardial fibrosis in aging rats: A late gadolinium enhancement magnetic resonance imaging study. 109-112 - George Lee, Rachel Sparks
, Sahirzeeshan Ali, Anant Madabhushi
, Michael D. Feldman, Stephen R. Master
, Natalie Shih, John Tomaszewski:
Co-occurring gland tensors in localized cluster graphs: Quantitative histomorphometry for predicting biochemical recurrence for intermediate grade prostate cancer. 113-116 - Pedro Miguel Morgado
, Margarida Silveira
, Jorge S. Marques
:
Extending local binary patterns to 3D for the diagnosis of Alzheimer's Disease. 117-120 - Anand A. Joshi
, Richard M. Leahy, Ramsey Derek Badawi, Abhijit J. Chaudhari:
Morphometry for early monitoring of treatment response in rheumatoid arthritis. 121-124 - Yinghe Huo, Koen L. Vincken, Max A. Viergever, Floris P. Lafeber:
Automatic joint detection in rheumatoid arthritis hand radiographs. 125-128 - Elisa Veronese, Mattia Veronese
, Stefano Sivolella
, Enrico Grisan
:
A radiographic-based method for marginal bone loss measurement in dental implants. 129-132 - Juan Wang, Yongyi Yang:
Spatial density modeling for discirminating between benign and malignant microcalcification lesions. 133-136 - Basak Oztan, Katherine R. Shubert, Chris S. Bjornsson, George E. Plopper, Bülent Yener:
Biologically-driven cell-graphs for breast tissue grading. 137-140 - Zhuoshi Wei, Weidong Zhang, Jianfei Liu, Shijun Wang, Jianhua Yao
, Ronald M. Summers:
Computer-aided detection of colitis on computed tomography using a visual codebook. 141-144 - Adrien Depeursinge
, Antonio Foncubierta-Rodríguez, Alejandro Vargas, Dimitri Van De Ville, Alexandra Platon, Pierre-Alexandre Poletti, Henning Müller
:
Rotation-covariant texture analysis of 4D dual-energy CT as an indicator of local pulmonary perfusion. 145-148 - Karteek Popuri, Dana Cobzas, Martin Jägersand, Nina Esfandiari, Vickie E. Baracos
:
FEM-based automatic segmentation of muscle and fat tissues from thoracic CT images. 149-152 - Yanal Wazaefi, Sébastien Paris, Julien Lefèvre
, Caroline Gaudy, Jean-Jacques Grob, Bernard Fertil:
Learning from examples to automatically cluster pigmented skin lesions. 153-156
Computational Methods in Microscopy
- Seyed Hamid Rezatofighi, William T. E. Pitkeathly, Stephen Gould, Richard I. Hartley, Katarina Mele, William E. Hughes, James G. Burchfield
:
A framework for generating realistic synthetic sequences of total internal reflection fluorescence microscopy images. 157-160 - Stamatios Lefkimmiatis, Michael Unser
:
3D Poisson microscopy deconvolution with Hessian Schatten-norm regularization. 161-164 - Saima Ben Hadj, Laure Blanc-Féraud, Gilles Aubert, Gilbert Engler, Elie Maalouf, Bruno Colicchio, Alain Dieterlen:
Blind depth-variant blur removal in confocal microscopy. 165-168 - Thorsten Schmidt, Jasmin Dürr, Margret Keuper, Thomas Blein
, Klaus Palme, Olaf Ronneberger:
Variational attenuation correction of two-view confocal microscopic recordings. 169-172 - Birsen Sirkeci-Mergen, Mallika Keralapura, Serena Coelho, Silas J. Leavesley
, Thomas C. Rich:
Linear unmixing of hyperspectral images for analysis of fluorescently-labeled cellswith imperfect endmember spectra. 173-176 - Junhong Min, Cédric Vonesch, Nicolas Olivier
, Hagai Kirshner, Suliana Manley
, Jong Chul Ye, Michael Unser
:
Continuous localization using sparsity constraints for high-density super-resolution microscopy. 177-180 - Stefan Sokoll, Klaus D. Tönnies, Martin Heine:
An online calibration method for astigmatism-based 3D particle tracking in complex living tissue. 181-184
Data Visualization, Annotation, and Retrieval
- Ruida Cheng, Marcelino Bernardo, Justin Senseney, Alexandra Bokinsky, William Gandler, Baris Turkbey, Thomas Pohida, Peter L. Choyke, Matthew J. McAuliffe:
Segmentation and surface reconstruction model of prostate MRI to improve prostate cancer diagnosis. 185-189 - Sébastien Jodogne
, Claire Bernard, Magali Devillers, Eric Lenaerts, Philippe Coucke:
Orthanc - A lightweight, restful DICOM server for healthcare and medical research. 190-193 - John D. Van Horn, Shantanu H. Joshi, Ian Bowman:
Graphical data mining of human cortical surface morphometry. 194-197 - Yang Song
, Weidong Cai, Yun Zhou, Lingfeng Wen, David Dagan Feng:
Pathology-centric medical image retrieval with hierarchical contextual spatial descriptor. 198-201 - Sidong Liu
, Weidong Cai, Lingfeng Wen, Dagan Feng:
Multi-Channel brain atrophy pattern analysis in neuroimaging retrieval. 202-205 - Hang Dou, Christian Bauer, Chris Wyman
, Reinhard Beichel:
Efficient rendering of anatomical tree structures using geometry proxy. 206-209 - Weidong Zhang, Jiamin Liu, Jianhua Yao
, Ronald M. Summers:
Automatic anatomical labeling of abdominal arteries for small bowel evaluation on 3D CT scans. 210-213
Registration 1
- Björn Eiben
, Lianghao Han
, John H. Hipwell, Thomy Mertzanidou
, Sven Kabus, Thomas Bülow, Cristian Lorenz, Gillian Newstead, Hiroyuki Abe, Mohammed Keshtgar, Sébastien Ourselin
, David J. Hawkes:
Biomechanically guided prone-to-supine image registration of breast MRI using an estimated reference state. 214-217 - Paul Swoboda, David Liu, Shaohua Kevin Zhou:
Anatomical landmark detection using multiple instance boosting with spatial regularization. 218-221 - Rene Donner, Horst Bischof:
One-shot learning of anatomical structure localization models. 222-225 - Gregory Gardner, Alan Morris, Koji Higuchi, Rob S. MacLeod, Joshua Cates
:
A point-correspondence approach to describing the distribution of image features on anatomical surfaces, with application to atrial fibrillation. 226-229 - Iman Aganj
, Martin Reuter, Mert R. Sabuncu
, Bruce Fischl:
Symmetric non-rigid image registration via an adaptive quasi-volume-preserving constraint. 230-233 - Yongning Lu, Ying Sun
, Rui Liao, Sim Heng Ong:
A new similarity measure for deformable image registration based on intensity matching. 234-237 - Sheshadri R. Thiruvenkadam, Sumit Kumar Nath, Priyavrat Jhunjhunwala:
Automatic non-rigid mismatch correction algorithm for CT-CT longitudinal oncology studies. 238-241 - Harriët Wilhelmina Mulder, Marijn van Stralen
, Claire Ren, Floris F. Berendsen, Johan G. Bosch, Josien P. W. Pluim:
Simultaneous pairwise registration for image mosaicing of TEE data. 242-245 - Achia Kronman, Leo Joskowicz:
Automatic bone fracture reduction by fracture contact surface identification and registration. 246-249
Diffusion MRI 1
- Colin J. Brown, Brian G. Booth
, Ghassan Hamarneh
:
K-confidence: Assessing uncertainty in tractography using K optimal paths. 250-253 - Aurobrata Ghosh, Thinhinane Megherbi, Fatima Oulebsir-Boumghar, Rachid Deriche:
Fiber orientation distribution from non-negative sparse recovery. 254-257 - Gautam Prasad, Shantanu H. Joshi, Talia M. Nir, Arthur W. Toga, Paul M. Thompson:
Flow-based network measures of brain connectivity in Alzheimer's disease. 258-261 - Omar Ocegueda, Mariano Rivera
:
Multi-Tensor Field spectral segmentation for white matter fiber bundle classification. 262-265 - Madelaine Daianu, Emily L. Dennis, Neda Jahanshad, Talia M. Nir, Arthur W. Toga, Clifford R. Jack, Michael W. Weiner, Paul M. Thompson:
Alzheimer's disease disrupts rich club organization in brain connectivity networks. 266-269
Functional MRI 1
- Soheil Faridi, Jonas Richiardi
, Patrik Vuilleumier
, Dimitri Van De Ville
:
Connectivity searchlight: A novel approach for MRI information mapping using multivariate connectivity. 270-273 - Shu Zhang, Jinglei Lv
, Xiang Li
, Xi Jiang
, Lei Guo, Tianming Liu:
Activated cliques: Network-based activation detection in task-based FMRI. 274-277 - Dongdong Lin, Ji-Gang Zhang, Jingyao Li, Vince D. Calhoun
, Yu-Ping Wang:
Identifying genetic connections with brain functions in schizophrenia using group sparse canonical correlation analysis. 278-281 - Abd-Krim Seghouane
, Adnan Shah
:
Consistent hemodynamic response function estimation in functional MRI by first order differencing. 282-285 - Muhammad Usman Khalid, Abd-Krim Seghouane
:
Improving functional connectivity detection in FMRI by combining sparse dictionary learning and canonical correlation analysis. 286-289
Compressive Sensing Methods in MRI
- Qiu Wang, Jun Liu, Nirmal Janardhanan, Michael O. Zenge, Edgar Mueller, Mariappan S. Nadar:
Tight frame learning for cardiovascular MRI. 290-293 - Yanhua Wang, Yihang Zhou
, Leslie Ying
:
Undersampled dynamic magnetic resonance imaging using patch-based spatiotemporal dictionaries. 294-297 - Nicolas Chauffert, Philippe Ciuciu, Pierre Weiss:
Variable density compressed sensing in MRI. Theoretical vs heuristic sampling strategies. 298-301 - Vimal Singh, Ahmed H. Tewfik:
Sparse magnetic resonance imaging using tagging RF pulses. 302-305 - Jing Qin
, Weihong Guo:
An efficient compressive sensing MR image reconstruction scheme. 306-309 - Yihang Zhou
, Yanhua Wang, Leslie Ying
:
A kernel-based compressed sensing approach to dynamic MRI from highly undersampled data. 310-313 - Huisu Yoon, Kyung Sang Kim, Jong Chul Ye:
Motion compensated compressed sensing dynamic MRI with low-rank patch-based residual reconstruction. 314-317 - Wenmiao Lu:
Compressive Slice Encoding for Metal Artifact Correction in MRI. 318-321 - Benjamin Trémoulhéac, David Atkinson
, Simon R. Arridge
:
Fast dynamic MRI via nuclear norm minimization and accelerated proximal gradient. 322-325 - Yue Hu, Sathish Ramani, Mathews Jacob
:
A fast majorize minimize algorithm for higher degree total variation regularization. 326-329
MRI Methods 1
- Qian Tao
, Martijn van de Giessen, Sebastiaan Piers, Katja Zeppenfeld, Rob J. van der Geest:
Combining magnetic resonance late gadolinium enhanced and Look-Locker sequences for myocardial scar characterization. 330-333 - Vinicius de Carvalho Rispoli, João Luiz Azevedo de Carvalho:
Deriving high-resolution velocity maps from low-resolution fourier velocity encoded MRI data. 334-337 - William Scott Hoge
, Robert A. Kraft, Emily Stern, Hong Pan
:
A method for z-shim compensated EPI-bold imaging in a single shot. 338-341 - Snehashis Roy
, Aaron Carass
, Jerry L. Prince:
Patch based intensity normalization of brain MR images. 342-345 - François Rousseau
, Colin Studholme:
A supervised patch-based image reconstruction technique: Application to brain MRI super-resolution. 346-349 - Amod Jog, Snehashis Roy
, Aaron Carass
, Jerry L. Prince:
Magnetic resonance image synthesis through patch regression. 350-353
Quantification of Organs and Disease 2
- François Chadebecq, Christophe Tilmant, Adrien Bartoli:
Using the Infocus-Breakpoint to estimate the scale of neoplasia in colonoscopy. 354-357 - Dwarikanath Mahapatra, Peter J. Schüffler
, Jeroen A. W. Tielbeek, Franciscus M. Vos, Joachim M. Buhmann:
Crohn's disease tissue segmentation from abdominal MRI using semantic information and graph cuts. 358-361 - Elisa Veronese, Enrico Grisan
, Giorgio Diamantis, Giorgio Battaglia, Cristiano Crosta, Cristina Trovato:
Hybrid patch-based and image-wide classification of confocal laser endomicroscopy images in Barrett's esophagus surveillance. 362-365 - Wei Yang, Qianjin Feng, Meiyan Huang, Zhentai Lu, Wufan Chen:
A non-parametric method based on NBNN for automatic detection of liver lesion in CT images. 366-369 - Andre Yaroshenko, Felix Gabriel Meinel, Martin Bech
, Arne Tapfer, Astrid Velroyen, Simone Schleede, Mark Müller, Sigrid Auweter, Alexander Bohla, Ali Oender Yildirim
, Konstantin Nikolaou, Fabian Bamberg, Oliver Eickelberg, Maximilian Reiser, Franz Pfeiffer:
Preclinical x-ray dark-field radiography for pulmonary emphysema evaluation. 370-373 - Sushravya Raghunath, Srinivasan Rajagopalan, Ronald A. Karwoski, Michael R. Bruesewitz, Cynthia H. McCollough, Brian J. Bartholmai
, Richard A. Robb:
Landscaping the effect of CT reconstruction parameters: Robust Interstitial Pulmonary Fibrosis quantitation. 374-377 - Rina Dewi Rudyanto, Arrate Muñoz-Barrutia, Alejandro A. Díaz, James C. Ross, George R. Washko, Carlos Ortiz-de-Solorzano
, Raúl San José Estépar
:
Modeling airway probability. 378-381 - Yrjö Tapio Hame, Elsa D. Angelini
, Eric A. Hoffman
, R. Graham Barr, Andrew F. Laine:
Robust quantification of pulmonary emphysema with a Hidden Markov Measure Field model. 382-385 - Fuyong Xing
, Lin Yang:
Robust cell segmentation for non-small cell lung cancer. 386-389 - Yinxiao Liu, Dakai Jin, Punam K. Saha
:
A new algorithm for trabecular bone thickness computation at low resolution achieved under in vivo condition. 390-393 - Yixun Liu, Samira M. Sadowski, Allison B. Weisbrod, Electron Kebebew, Ronald M. Summers, Jianhua Yao
:
Tumor growth modeling based on dual phase CT and FDG-PET. 394-397 - Haibo Wang, Satish Viswanath
, Anant Madabhushi:
Discriminatively weighted multi-scale Local Binary Patterns: Applications in prostate cancer diagnosis on T2W MRI. 398-401 - Akshay Pai, Lauge Sørensen
, Sune Darkner
, Peter Mysling, Dan R. Jørgensen
, Erik B. Dam, Martin Lillholm, Joonmi Oh, Gennan Chen, Joyce Suhy, Jon Sporring
, Mads Nielsen:
Cube propagation for focal brain atrophy estimation. 402-405
Cell Detection, Segmentation
- Alberto Santamaría-Pang, Yuchi Huang, Jens Rittscher
:
Cell segmentation and classification via unsupervised shape ranking. 406-409 - Nandita Nayak, Hang Chang, Alexander Borowsky, Paul T. Spellman, Bahram Parvin:
Classification of tumor histopathology via sparse feature learning. 410-413 - Jyh-Ying Peng, Yen-Jen Chen, Marc D. Green, Susan L. Forsburg
, Chun-Nan Hsu:
Robust cell segmentation for schizosaccharomyces pombe images with focus gradient. 414-417 - Benjamin Xueqi Guan, Bir Bhanu
, Ninad Thakoor
, Prudence Talbot, Sabrina Lin:
Automatic cell region detection by k-means with weighted entropy. 418-421 - Kun Liu, Thorsten Schmidt, Thomas Blein
, Jasmin Dürr, Klaus Palme, Olaf Ronneberger:
Joint 3D cell segmentation and classification in the Arabidopsis root using energy minimization and shape priors. 422-425 - Sabina S. Pfister, M. Betizeau
, C. Dehay, Rodney J. Douglas:
Robust 3D cell segmentation by local region growing in convex volumes. 426-431 - Hai Su, Fuyong Xing
, Jonah D. Lee, Charlotte A. Peterson, Lin Yang:
Learning based automatic detection of myonuclei in isolated single skeletal muscle fibers using multi-focus image fusion. 432-435 - Xavier Descombes, Grégoire Malandain, Caroline Fonta, Laszlo Négyessy
, Rajmund Mokso:
Automatic dendrite spines detection from x-ray tomography volumes. 436-439 - Nico Scherf
, Thomas Zerjatke, K. Klemm, Ingmar Glauche, Ingo Roeder:
Beyond genealogies: Mutual information of causal paths to analyse single cell tracking data. 440-443