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ORCIDNeil R. Smalheiser
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- affiliation: University of Illinois at Chicago, USA
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2020 – today
- 2023
[j31]Yakub Sebastian
, Neil R. Smalheiser:
Editorial: Emerging areas in literature-based discovery. Frontiers Res. Metrics Anal. 8 (2023)- 2022
- [j30]Neil R. Smalheiser, Arthur W. Holt:
A web-based tool for automatically linking clinical trials to their publications. J. Am. Medical Informatics Assoc. 29(5): 822-830 (2022) - 2021
- [j29]Chaomei Chen, David Chavalarias, Neil R. Smalheiser, Dietmar Wolfram:
Editorial: Coronavirus Research Landscape: Resources, Utilities, and Analytic Studies. Frontiers Res. Metrics Anal. 6: 712672 (2021) - 2020
- [j28]Mengqi Luo, Aaron M. Cohen, Sidharth Addepalli, Neil R. Smalheiser:
Identifying main finding sentences in clinical case reports. Database J. Biol. Databases Curation 2020 (2020)
2010 – 2019
- 2019
- [j27]Neil R. Smalheiser, Mengqi Luo, Sidharth Addepalli, Xiaokai Cui:
A manual corpus of annotated main findings of clinical case reports. Database J. Biol. Databases Curation 2019: bay143 (2019) - [j26]Neil R. Smalheiser, Aaron M. Cohen, Gary Bonifield:
Unsupervised low-dimensional vector representations for words, phrases and text that are transparent, scalable, and produce similarity metrics that are not redundant with neural embeddings. J. Biomed. Informatics 90 (2019) - 2018
- [j25]Aaron M. Cohen, Zackary O. Dunivin, Neil R. Smalheiser:
A probabilistic automated tagger to identify human-related publications. Database J. Biol. Databases Curation 2018: bay079 (2018) - [j24]Neil R. Smalheiser, Aaron M. Cohen:
Design of a generic, open platform for machine learning-assisted indexing and clustering of articles in PubMed, a biomedical bibliographic database. Data Inf. Manag. 2(1): 27-36 (2018) - [c15]Halil Kilicoglu, Aurélie Névéol, Timothy Clark, Hua Xu, Neil R. Smalheiser:
Methods and Tools to Enhance Rigor and Reproducibility of Biomedical Research. AMIA 2018 - [c14]Aaron M. Cohen, Neil R. Smalheiser:
OHSU CLEF 2018 Task 2 Diagnostic Test Accuracy Ranking using Publication Type Cluster Similarity Measures. CLEF (Working Notes) 2018 - [i1]Neil R. Smalheiser, Gary Bonifield:
Unsupervised Low-Dimensional Vector Representations for Words, Phrases and Text that are Transparent, Scalable, and produce Similarity Metrics that are Complementary to Neural Embeddings. CoRR abs/1801.01884 (2018) - 2017
- [j23]Yufang Peng, Gary Bonifield, Neil R. Smalheiser:
Gaps within the Biomedical Literature: Initial Characterization and Assessment of Strategies for Discovery. Frontiers Res. Metrics Anal. 2: 3 (2017) - [j22]Byron C. Wallace, Anna Noel-Storr, Iain James Marshall, Aaron M. Cohen, Neil R. Smalheiser, James Thomas:
Identifying reports of randomized controlled trials (RCTs) via a hybrid machine learning and crowdsourcing approach. J. Am. Medical Informatics Assoc. 24(6): 1165-1168 (2017) - [j21]Neil R. Smalheiser, Aaron M. Cohen:
Call for Papers! Special Issue on Models of Discovery: Mining the Scientific Literature. J. Data Inf. Sci. 2(2): 96 (2017) - [j20]Neil R. Smalheiser:
Rediscovering Don Swanson: The Past, Present and Future of Literature-based Discovery. J. Data Inf. Sci. 2(4): 43-64 (2017) - [c13]Adam K. Kehoe, Vetle I. Torvik, Matthew B. Ross, Neil R. Smalheiser:
Predicting MeSH Beyond MEDLINE. SWM@WSDM 2017: 49-56 - 2015
- [j19]Aaron M. Cohen, Neil R. Smalheiser, Marian S. McDonagh, Clement T. Yu, Clive E. Adams, John M. Davis, Philip S. Yu:
Automated confidence ranked classification of randomized controlled trial articles: an aid to evidence-based medicine. J. Am. Medical Informatics Assoc. 22(3): 707-717 (2015) - [c12]Vojtech Huser, Alexa T. McCray, Neil R. Smalheiser, Asba Tasneem, Chunhua Weng:
ClinicalTrials.gov: Adding Value through Informatics. AMIA 2015 - 2014
- [j18]Yu Jiang, Can Lin, Weiyi Meng, Clement T. Yu, Aaron M. Cohen, Neil R. Smalheiser:
Rule-based deduplication of article records from bibliographic databases. Database J. Biol. Databases Curation 2014 (2014) - [j17]Neil R. Smalheiser, Can Lin, Lifeng Jia, Yu Jiang, Aaron M. Cohen, Clement T. Yu, John M. Davis, Clive E. Adams, Marian S. McDonagh, Weiyi Meng:
Design and implementation of Metta, a metasearch engine for biomedical literature retrieval intended for systematic reviewers. Health Inf. Sci. Syst. 2(1): 1 (2014) - [e2]Yanchun Zhang, Guiqing Yao, Jing He, Lei Wang, Neil R. Smalheiser, Xiao-Xia Yin:
Health Information Science - Third International Conference, HIS 2014, Shenzhen, China, April 22-23, 2014. Proceedings. Lecture Notes in Computer Science 8423, Springer 2014, ISBN 978-3-319-06268-6 [contents] - 2012
- [j16]Neil R. Smalheiser:
Literature-based discovery: Beyond the ABCs. J. Assoc. Inf. Sci. Technol. 63(2): 218-224 (2012) - [c11]Liangcai Shu, Can Lin, Weiyi Meng, Yue Han, Clement T. Yu, Neil R. Smalheiser:
A framework for entity resolution with efficient blocking. IRI 2012: 431-440 - 2011
- [j15]Neil R. Smalheiser, Wei Zhou, Vetle I. Torvik:
Distribution of "Characteristic" Terms in MEDLINE Literatures. Inf. 2(2): 266-276 (2011) - [j14]Henrique Andrade, Neil R. Smalheiser:
Editorial for Special Issue: ACM IHI 2010 Best Papers. J. Medical Syst. 35(5): 1097-1098 (2011) - 2010
- [c10]Aaron M. Cohen, Clive E. Adams, John M. Davis, Clement T. Yu, Philip S. Yu, Weiyi Meng, Lorna Duggan, Marian McDonagh, Neil R. Smalheiser:
Evidence-based medicine, the essential role of systematic reviews, and the need for automated text mining tools. IHI 2010: 376-380 - [e1]Tiffany C. Veinot, Ümit V. Çatalyürek, Gang Luo, Henrique Andrade, Neil R. Smalheiser:
ACM International Health Informatics Symposium, IHI 2010, Arlington, VA, USA, November 11 - 12, 2010, Proceedings. ACM 2010, ISBN 978-1-4503-0030-8 [contents]
2000 – 2009
- 2009
- [j13]Neil R. Smalheiser, Vetle I. Torvik:
Author name disambiguation. Annu. Rev. Inf. Sci. Technol. 43(1): 1-43 (2009) - [j12]Neil R. Smalheiser, Vetle I. Torvik, Wei Zhou:
Arrowsmith two-node search interface: A tutorial on finding meaningful links between two disparate sets of articles in MEDLINE. Comput. Methods Programs Biomed. 94(2): 190-197 (2009) - [j11]Vetle I. Torvik, Neil R. Smalheiser:
Author name disambiguation in MEDLINE. ACM Trans. Knowl. Discov. Data 3(3): 11:1-11:29 (2009) - [c9]Vetle I. Torvik, Allen H. Renear, Neil R. Smalheiser, Catherine C. Marshall:
Beyond (simple) reading: Strategies, discoveries, and collaborations. ASIST 2009: 1-6 - 2007
- [j10]Vetle I. Torvik, Neil R. Smalheiser:
A quantitative model for linking two disparate sets of articles in MEDLINE. Bioinform. 23(13): 1658-1665 (2007) - [c8]Wei Zhou, Clement T. Yu, Neil R. Smalheiser, Vetle I. Torvik, Jie Hong:
Knowledge-intensive conceptual retrieval and passage extraction of biomedical literature. SIGIR 2007: 655-662 - 2006
- [j9]Wei Zhou, Vetle I. Torvik, Neil R. Smalheiser:
ADAM: another database of abbreviations in MEDLINE. Bioinform. 22(22): 2813-2818 (2006) - [j8]Don R. Swanson, Neil R. Smalheiser, Vetle I. Torvik:
Ranking indirect connections in literature-based discovery: The role of medical subject headings. J. Assoc. Inf. Sci. Technol. 57(11): 1427-1439 (2006) - [c7]Wei Zhang, Clement T. Yu, Neil R. Smalheiser, Vetle I. Torvik:
Segmentation of Publication Records of Authors from the Web. ICDE 2006: 120 - [c6]Wei Zhou, Clement T. Yu, Vetle I. Torvik, Neil R. Smalheiser:
A Concept-Based Framework for Passage Retrieval at Genomics. TREC 2006 - 2005
- [j7]Vetle I. Torvik, Marc Weeber, Don R. Swanson, Neil R. Smalheiser:
A probabilistic similarity metric for Medline records: A model for author name disambiguation. J. Assoc. Inf. Sci. Technol. 56(2): 140-158 (2005) - [j6]Neil R. Smalheiser:
Erratum to publisher. J. Assoc. Inf. Sci. Technol. 56(9): 1010- (2005) - [c5]Neil R. Smalheiser:
The Arrowsmith Project: 2005 Status Report. ALT 2005: 11 - [c4]Neil R. Smalheiser:
The Arrowsmith Project: 2005 Status Report. Discovery Science 2005: 26-43 - 2004
- [j5]Neil R. Smalheiser, Vetle I. Torvik:
A population-based statistical approach identifies parameters characteristic of human microRNA-mRNA interactions. BMC Bioinform. 5: 139 (2004) - 2003
- [j4]Daniel Gardner, Arthur W. Toga, Giorgio A. Ascoli, Jackson T. Beatty, James F. Brinkley, Anders M. Dale, Peter T. Fox, Esther P. Gardner, John S. George, Nigel H. Goddard, Kristen M. Harris, Edward Herskovits, Michael L. Hines, Gwen A. Jacobs, Russell E. Jacobs, Edward G. Jones, David N. Kennedy, Daniel Y. Kimberg, John C. Mazziotta, Perry L. Miller, Susumu Mori, David C. Mountain, Allan L. Reiss, Glenn D. Rosen, David A. Rottenberg, Gordon M. Shepherd, Neil R. Smalheiser, Kenneth P. Smith, Tom Strachan, David C. Van Essen, Robert W. Williams, Stephen T. C. Wong:
Towards effective and rewarding data sharing. Neuroinformatics 1(3): 289-295 (2003) - [c3]Vetle I. Torvik, Marc Weeber, Don R. Swanson, Neil R. Smalheiser:
A Probabilistic Similarity Metric for Medline Records: A Model for Author Name Disambiguation. AMIA 2003 - [c2]Neil R. Smalheiser, Carole L. Palmer, Don R. Swanson, Padmini Srinivasan, Marti A. Hearst:
Literature-based discovery: New trends and techniques. Sponsored by SIG HCI. ASIST 2003: 497 - 2001
- [j3]Don R. Swanson, Neil R. Smalheiser, Abraham Bookstein:
Information discovery from complementary literatures: Categorizing viruses as potential weapons. J. Assoc. Inf. Sci. Technol. 52(10): 797-812 (2001)
1990 – 1999
- 1999
- [j2]Don R. Swanson, Neil R. Smalheiser:
Implicit Text Linkages between Medline Records: Using Arrowsmith as an Aid to Scientific Discovery. Libr. Trends 48(1) (1999) - 1997
- [j1]Don R. Swanson, Neil R. Smalheiser:
An Interactive System for Finding Complementary Literatures: A Stimulus to Scientific Discovery. Artif. Intell. 91(2): 183-203 (1997) - 1996
- [c1]Don R. Swanson, Neil R. Smalheiser:
Undiscovered Public Knowledge: A Ten-Year Update. KDD 1996: 295-298
Coauthor Index
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