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2020 – today
- 2024
[j12]Maxat Kulmanov
, Francisco J. Guzmán-Vega, Paula Duek Roggli, Lydie Lane, Stefan T. Arold, Robert Hoehndorf:
Protein function prediction as approximate semantic entailment. Nat. Mac. Intell. 6(2): 220-228 (2024)- 2023
- [c2]Lydie Lane, Kasun Samarasinghe, Pierre-André Michel:
A federated query between neXtProt and OrthoDB retrieves 44 uncharacterized human proteins highly expressed in the brain and conserved in Drosophila melanogaster. SWAT4HCLS 2023: 175-176 - 2021
- [j11]Paula Duek Roggli, Camille Mary, Monique Zahn-Zabal, Amos Bairoch, Lydie Lane:
Functionathon: a manual data mining workflow to generate functional hypotheses for uncharacterized human proteins and its application by undergraduate students. Database J. Biol. Databases Curation 2021 (2021) - 2020
- [j10]Monique Zahn-Zabal, Pierre-André Michel, Alain Gateau, Frédéric Nikitin, Mathieu Schaeffer, Estelle Audot, Pascale Gaudet, Paula Duek Roggli, Daniel Dinis Teixeira, Valentine Rech de Laval, Kasun Samarasinghe, Amos Bairoch, Lydie Lane:
The neXtProt knowledgebase in 2020: data, tools and usability improvements. Nucleic Acids Res. 48(Database-Issue): D328-D334 (2020)
2010 – 2019
- 2017
- [j9]Mathieu Schaeffer, Alain Gateau, Daniel Dinis Teixeira, Pierre-André Michel, Monique Zahn-Zabal, Lydie Lane:
The neXtProt peptide uniqueness checker: a tool for the proteomics community. Bioinform. 33(21): 3471-3472 (2017) - [j8]Pascale Gaudet, Pierre-André Michel, Monique Zahn-Zabal, Aurore Britan, Isabelle Cusin, Marcin Domagalski, Paula Duek Roggli, Alain Gateau, Anne Gleizes, Valérie Hinard, Valentine Rech de Laval, JinJin Lin, Frédéric Nikitin, Mathieu Schaeffer, Daniel Dinis Teixeira, Lydie Lane, Amos Bairoch:
The neXtProt knowledgebase on human proteins: 2017 update. Nucleic Acids Res. 45(Database-Issue): D177-D182 (2017) - 2016
- [j7]Olivier Sallou, Paula Duek Roggli, Thomas A. Darde, Olivier Collin, Lydie Lane, Frédéric Chalmel:
PepPSy: a web server to prioritize gene products in experimental and biocuration workflows. Database J. Biol. Databases Curation 2016 (2016) - 2015
- [j6]Pascale Gaudet, Pierre-André Michel, Monique Zahn-Zabal, Isabelle Cusin, Paula Duek Roggli, Olivier Evalet, Alain Gateau, Anne Gleizes, Mario Pereira, Daniel Dinis Teixeira, Ying Zhang, Lydie Lane, Amos Bairoch:
The neXtProt knowledgebase on human proteins: current status. Nucleic Acids Res. 43(Database-Issue): 764-770 (2015) - [j5]Christine Chichester, Oliver Karch, Pascale Gaudet, Lydie Lane, Barend Mons, Amos Bairoch:
Converting neXtProt into Linked Data and nanopublications. Semantic Web 6(2): 147-153 (2015) - 2014
- [j4]Heinz Stockinger, Adrian M. Altenhoff, Konstantin Arnold, Amos Bairoch, Frederic B. Bastian, Sven Bergmann, Lydie Bougueleret, Philipp Bucher, Mauro Delorenzi, Lydie Lane, Philippe Le Mercier, Frédérique Lisacek, Olivier Michielin, Patricia M. Palagi, Jacques Rougemont, Torsten Schwede, Christian von Mering, Erik van Nimwegen, Daniel Walther, Ioannis Xenarios, Mihaela Zavolan, Evgeny M. Zdobnov, Vincent Zoete, Ron D. Appel:
Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support. Nucleic Acids Res. 42(Webserver-Issue): 436-441 (2014) - [j3]Christine Chichester, Pascale Gaudet, Oliver Karch, Paul Groth, Lydie Lane, Amos Bairoch, Barend Mons, Antonis Loizou:
Querying neXtProt nanopublications and their value for insights on sequence variants and tissue expression. J. Web Semant. 29: 3-11 (2014) - 2012
- [j2]Lydie Lane, Ghislaine Argoud-Puy, Aurore Britan, Isabelle Cusin, Paula Duek Roggli, Olivier Evalet, Alain Gateau, Pascale Gaudet, Anne Gleizes, Alexandre Masselot, Catherine Zwahlen, Amos Bairoch:
neXtProt: a knowledge platform for human proteins. Nucleic Acids Res. 40(Database-Issue): 76-83 (2012) - 2011
- [c1]Guido Bologna, Anne-Lise Veuthey, Marco Pagni, Lydie Lane, Amos Bairoch:
A Preliminary Study on the Prediction of Human Protein Functions. IWINAC (1) 2011: 334-343
2000 – 2009
- 2009
- [j1]Pascale Gaudet, Lydie Lane, Petra Fey, Alan J. Bridge, Sylvain Poux, Andrea H. Auchincloss, Kristian B. Axelsen, Silvia Braconi-Quintaje, Emmanuel Boutet, P. Brown, Elisabeth Coudert, Ruchira S. Datta, W. C. de Lima, Tulio de Oliveira, Severine Duvaud, N. Farriol-Mathis, Serenella Ferro-Rojas, Marc Feuermann, Alain Gateau, Ursula Hinz, Chantal Hulo, Janet James, Silvia Jimenez, Florence Jungo, Guillaume Keller, Phillippe Lemercier, Damien Lieberherr, Madelaine Moinat, Anastasia N. Nikolskaya, Ivo Pedruzzi, Catherine Rivoire, Bernd Roechert, Michel Schneider, E. Stanley, Michael Tognolli, Kimmen Sjölander, Lydie Bougueleret, Rex L. Chisholm, Amos Bairoch:
Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase. Database J. Biol. Databases Curation 2009 (2009)
Coauthor Index
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