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Nico Scherf
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Publications
- 2021
- [j6]Johannes Waschke, Mario Hlawitschka, Kerim Anlas, Vikas Trivedi, Ingo Roeder, Jan Huisken, Nico Scherf:
linus: Conveniently explore, share, and present large-scale biological trajectory data in a web browser. PLoS Comput. Biol. 17(11) (2021) - [i3]Elena Williams, Sebastian Niehaus, Janis Reinelt, Alberto Merola, Paul Glad Mihai, Ingo Roeder, Nico Scherf, Maria del C. Valdés Hernández:
Quality control for more reliable integration of deep learning-based image segmentation into medical workflows. CoRR abs/2112.03277 (2021) - 2020
- [i2]Nastassya Horlava, Alisa Mironenko, Sebastian Niehaus, Sebastian Wagner, Ingo Roeder, Nico Scherf:
A comparative study of semi- and self-supervised semantic segmentation of biomedical microscopy data. CoRR abs/2011.08076 (2020) - 2016
- [c9]Konstantin Thierbach, Gopi Shah, Ingmar Glauche, Jan Huisken, Ingo Roeder, Nico Scherf:
Biology-inspired visualization of morphogenetic motion in the zebrafish endoderm. ISBI 2016: 925-929 - 2015
- [j2]Theresa Niederberger, Henrik Failmezger, Diana Uskat, Don Poron, Ingmar Glauche, Nico Scherf, Ingo Roeder, Timm Schroeder, Achim Tresch:
Factor graph analysis of live cell-imaging data reveals mechanisms of cell fate decisions. Bioinform. 31(11): 1816-1823 (2015) - 2014
- [c8]Tim Becker, W. Kanje, Daniel H. Rapoport, Konstantin Thierbach, Nico Scherf, Ingo Roeder, Amir Madany Mamlouk:
The benchmark data SET CeTReS.B-MI for in vitro mitosis detection. ISBI 2014: 469-472 - 2013
- [c7]Nico Scherf, Michael Kunze, Konstantin Thierbach, Thomas Zerjatke, Patryk Burek, Heinrich Herre, Ingmar Glauche, Ingo Roeder:
Assisting the Machine Paradigms for Human-Machine Interaction in Single Cell Tracking. Bildverarbeitung für die Medizin 2013: 116-121 - [c6]Nico Scherf, Thomas Zerjatke, K. Klemm, Ingmar Glauche, Ingo Roeder:
Beyond genealogies: Mutual information of causal paths to analyse single cell tracking data. ISBI 2013: 440-443 - 2012
- [j1]Nico Scherf, Maria Herberg, Konstantin Thierbach, Thomas Zerjatke, Tuzer Kalkan, Peter Humphreys, Austin Smith, Ingmar Glauche, Ingo Roeder:
Imaging, quantification and visualization of spatio-temporal patterning in mESC colonies under different culture conditions. Bioinform. 28(18): 556-561 (2012) - [c5]Nico Scherf, Christian Ludborzs, Konstantin Thierbach, Jens-Peer Kuska, Ulf-Dietrich Braumann, Patrick Scheibe, Tilo Pompe, Ingmar Glauche, Ingo Roeder:
FluidTracks - Combining Nonlinear Image Registration and Active Contours for Cell Tracking. Bildverarbeitung für die Medizin 2012: 57-62 - 2009
- [c4]Nico Scherf, Jens-Peer Kuska, Ulf-Dietrich Braumann, Katja Franke, Tilo Pompe, Ingo Röder:
Spatio-temporal Analysis of Unstained Cells In-vitro. Bildverarbeitung für die Medizin 2009: 292-296
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