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Shigeto Seno
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2020 – today
- 2024
- [j10]Kazufumi Hosoda, Shigeto Seno, Naomi Murakami, Hideo Matsuda, Yutaka Osada, Rikuto Kamiura, Michio Kondoh:
Synthetic model ecosystem of 12 cryopreservable microbial species allowing for a noninvasive approach. Biosyst. 235: 105087 (2024) - 2023
- [j9]Kazufumi Hosoda, Shigeto Seno, Rikuto Kamiura, Naomi Murakami, Michio Kondoh:
Biodiversity and Constrained Information Dynamics in Ecosystems: A Framework for Living Systems. Entropy 25(12): 1624 (2023) - [c12]Toru Nagamura, Shigeto Seno, Hironori Shigeta, Tomohiro Mashita, Hideo Matsuda:
Cell Tracking via Reinforcement Learning with Microscopic Image Simulator. ICBET 2023: 16-22 - [c11]Koki Nishi, Junko Yoshida, Shigeto Seno, Kyoji Horie, Hideo Matsuda:
Pseudotime-based Deep Learning of Gene Regulatory Relationships from Single-Cell Expression Data. ICBET 2023: 56-62 - 2022
- [i2]Kazufumi Hosoda, Keigo Nishida, Shigeto Seno, Tomohiro Mashita, Hideki Kashioka, Izumi Ohzawa:
It's DONE: Direct ONE-shot learning without training optimization. CoRR abs/2204.13361 (2022) - [i1]Kazufumi Hosoda, Shigeto Seno, Tsutomu Murata:
Simulating reaction time for Eureka effect in visual object recognition using artificial neural network. CoRR abs/2207.00815 (2022) - 2021
- [c10]Kenji Fujimoto, Tsubasa Mizugaki, Utkrisht Rajkumar, Hironori Shigeta, Shigeto Seno, Yutaka Uchida, Masaru Ishii, Vineet Bafna, Hideo Matsuda:
A CNN-based cell tracking method for multi-slice intravital imaging data. BCB 2021: 35:1-35:7
2010 – 2019
- 2019
- [j8]Yoshiaki Sota, Shigeto Seno, Hironori Shigeta, Naoki Osato, Masafumi Shimoda, Shinzaburo Noguchi, Hideo Matsuda:
Improvement of detection performance of fusion genes from RNA-seq data by clustering short reads. J. Bioinform. Comput. Biol. 17(3): 1940008:1-1940008:12 (2019) - [j7]Viacheslav Kapilevich, Shigeto Seno, Hideo Matsuda, Yoichi Takenaka:
Chromatin 3D Reconstruction from Chromosomal Contacts Using a Genetic Algorithm. IEEE ACM Trans. Comput. Biol. Bioinform. 16(5): 1620-1626 (2019) - [c9]Hironori Shigeta, Shigeto Seno, Shino Nishizawa, Yutaka Uchida, Junichi Kikuta, Masaru Ishii, Hideo Matsuda:
Analyzing Leukocyte Migration Trajectories by Deformable Image Matching. BIBE 2019: 94-98 - [c8]Naoki Osato, Hironori Shigeta, Shigeto Seno, Yutaka Uchida, Junichi Kikuta, Masaru Ishii, Hideo Matsuda:
Single-cell Transcriptome Analysis of Mouse Leukocytes in Inflammatory Stimulation. BIBM 2019: 1229-1231 - 2018
- [j6]Yoichi Takenaka, Kazuma Mikami, Shigeto Seno, Hideo Matsuda:
Automated transition analysis of activated gene regulation during diauxic nutrient shift in Escherichia coli and adipocyte differentiation in mouse cells. BMC Bioinform. 19-S(4): 49-59 (2018) - [c7]Yoshiaki Sota, Shigeto Seno, Hironori Shigeta, Naoki Osato, Masafumi Shimoda, Shinzaburo Noguchi, Hideo Matsuda:
Detection of Fusion Genes from Human Breast Cancer Cell-Line RNA-Seq Data Using Shifted Short Read Clustering. BIBE 2018: 159-162 - [c6]Mitsuhiro Eto, Wataru Hirota, Shigeto Seno, Hideo Matsuda:
Asymmetric Integration of Single-Cell Transcriptomic Data using Latent Dirichlet Allocation and Procrustes Analysis. BIBM 2018: 2129-2135 - 2017
- [j5]Hironori Shigeta, Tomohiro Mashita, Junichi Kikuta, Shigeto Seno, Haruo Takemura, Masaru Ishii, Hideo Matsuda:
Bone marrow cavity segmentation using graph-cuts with wavelet-based texture feature. J. Bioinform. Comput. Biol. 15(5): 1740004:1-1740004:16 (2017) - 2016
- [c5]Yoshiaki Sota, Shigeto Seno, Yoichi Takenaka, Shinzaburo Noguchi, Hideo Matsuda:
Comparative Analysis of Transformation Methods for Gene Expression Profiles in Breast Cancer Datasets. BIBE 2016: 328-333 - [c4]Hironori Shigeta, Tomohiro Mashita, Junichi Kikuta, Shigeto Seno, Haruo Takemura, Hideo Matsuda, Masaru Ishii:
A bone marrow cavity segmentation method using wavelet-based texture feature. ICPR 2016: 2133-2138 - 2015
- [j4]Yoichi Takenaka, Shigeto Seno, Hideo Matsuda:
Detecting shifts in gene regulatory networks during time-course experiments at single-time-point temporal resolution. J. Bioinform. Comput. Biol. 13(5): 1543002:1-1543002:18 (2015) - 2014
- [c3]Hironori Shigeta, Tomohiro Mashita, Takeshi Kaneko, Junichi Kikuta, Shigeto Seno, Haruo Takemura, Hideo Matsuda, Masaru Ishii:
A Graph Cuts Image Segmentation Method for Quantifying Barrier Permeation in Bone Tissue. I3A@ICPR 2014: 16-19 - [c2]Tomohiro Mashita, Jun Usam, Hironori Shigeta, Yoshihiro Kuroda, Junichi Kikuta, Shigeto Seno, Masaru Ishii, Hideo Matsuda, Haruo Takemura:
A Segmentation Method for Bone Marrow Cavity Imaging Using Graph Cuts. I3A@ICPR 2014: 20-23 - 2012
- [j3]Yukito Watanabe, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda:
An estimation method for inference of gene regulatory net-work using Bayesian network with uniting of partial problems. BMC Genom. 13(S-1): S12 (2012) - [j2]Tomoshige Ohno, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda:
A Method for Isoform Prediction from RNA-Seq Data by Iterative Mapping. Inf. Media Technol. 7(2): 921-927 (2012) - 2010
- [j1]Tatsuya Yoshikawa, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda:
Improved Prediction Method for Protein Interactions Using Both Structural and Functional Characteristics of Proteins. Inf. Media Technol. 5(2): 489-502 (2010)
2000 – 2009
- 2002
- [c1]Shigeto Seno, Reiji Teramoto, Hideo Matsuda:
P-quasi Complete Linkage Analysis for Gene-Expression Data. CSB 2002: 342
Coauthor Index
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