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BMC Genomics, Volume 13 - Supplements
Volume 13, Number S-1, January 2012
Introduction
- Yi-Ping Phoebe Chen
, Peer Bork
:
The Tenth Asia Pacific Bioinformatics Conference (APBC 2012). I1
- Hatice U. Osmanbeyoglu
, Ryan J. Hartmaier
, Steffi Oesterreich, Xinghua Lu:
Improving ChIP-seq peak-calling for functional co-regulator binding by integrating multiple sources of biological information. S1 - Alena Mysicková, Martin Vingron:
Detection of interacting transcription factors in human tissues using predicted DNA binding affinity. S2 - Tzong-Yi Lee, Wen-Chi Chang
, Justin Bo-Kai Hsu, Tzu-Hao Chang, Dray-Ming Shien:
GPMiner: an integrated system for mining combinatorial cis-regulatory elements in mammalian gene group. S3 - Hyokyeong Lee, Asher Moody-Davis, Utsab Saha, Brian M. Suzuki, Daniel Asarnow
, Steven Chen, Michelle Arkin
, Conor R. Caffrey, Rahul Singh:
Quantification and clustering of phenotypic screening data using time-series analysis for chemotherapy of schistosomiasis. S4 - Narges Razavian
, Hetunandan Kamisetty, Christopher James Langmead
:
Learning generative models of molecular dynamics. S5 - Kaname Kojima, Seiya Imoto, Rui Yamaguchi, André Fujita, Mai Yamauchi, Noriko Gotoh
, Satoru Miyano
:
Identifying regulational alterations in gene regulatory networks by state space representation of vector autoregressive models and variational annealing. S6 - Yiwei Zhang, Fei Hu, Jijun Tang:
A mixture framework for inferring ancestral gene orders. S7 - David Sankoff, Chunfang Zheng, Baoyong Wang:
A model for biased fractionation after whole genome duplication. S8 - Nai-Jyuan Wang, Chi-Ching Lee, Chao-Sheng Cheng, Wei-Cheng Lo
, Ya-Fen Yang, Ming-Nan Chen, Ping-Chiang Lyu:
Construction and analysis of a plant non-specific lipid transfer protein database (nsLTPDB). S9 - Gloria C.-L. Fu, Wen-Chang Lin
:
Identification of gene-oriented exon orthology between human and mouse. S10 - Darby Tien-Hao Chang, Chi-Yeh Wu, Chen-Yu Fan:
A study on promoter characteristics of head-to-head genes in Saccharomyces cerevisiae. S11 - Yukito Watanabe, Shigeto Seno
, Yoichi Takenaka, Hideo Matsuda
:
An estimation method for inference of gene regulatory net-work using Bayesian network with uniting of partial problems. S12 - Sung-Chou Li, Yu-Lun Liao, Meng-Ru Ho, Kuo-Wang Tsai
, Chun-Hung Lai, Wen-Chang Lin
:
miRNA arm selection and isomiR distribution in gastric cancer. S13 - Guo-Qing Lei, Yong Dou, Wen Wan, Fei Xia, Rongchun Li, Meng Ma, Dan Zou:
CPU-GPU hybrid accelerating the Zuker algorithm for RNA secondary structure prediction applications. S14 - Trupti Joshi
, Kapil Patil, Michael R. Fitzpatrick, D. Franklin Levi, Qiuming Yao, Jeffrey R. Cook, Zheng Wang, Marc Libault, Laurent Brechenmacher, Babu Valliyodan
, Xiaolei Wu, Jianlin Cheng
, Gary Stacey, Henry T. Nguyen, Dong Xu:
Soybean Knowledge Base (SoyKB): a web resource for soybean translational genomics. S15
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