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Journal of Biomedical Informatics, Volume 117
Volume 117, May 2021
- Ameer Hamza Shakur

, Shuai Huang, Xiaoning Qian, Xiangyu Chang:
SURVFIT: Doubly sparse rule learning for survival data. 103691 - Rui Meng, Braden Soper, Herbert K. H. Lee, Vincent X. Liu, John D. Greene, Priyadip Ray:

Nonstationary multivariate Gaussian processes for electronic health records. 103698 - Xinyue Wang, Xiaoqian Jiang, Jaideep Vaidya:

Efficient verification for outsourced genome-wide association studies. 103714 - Scott A. Malec

, Peng Wei, Elmer V. Bernstam, Richard D. Boyce, Trevor Cohen:
Using computable knowledge mined from the literature to elucidate confounders for EHR-based pharmacovigilance. 103719 - Pranay S. Yadav

, Nithin Nagaraj:
Causal discovery using compression-complexity measures. 103724 - Yanghui Li, Guihua Wen, Yang Hu, Mingnan Luo, Baochao Fan, Changjun Wang, Pei Yang:

Multi-source Seq2seq guided by knowledge for Chinese healthcare consultation. 103727 - Tiago Leão, Sara C. Madeira

, Marta Gromicho
, Mamede de Carvalho, Alexandra M. Carvalho:
Learning dynamic Bayesian networks from time-dependent and time-independent data: Unraveling disease progression in Amyotrophic Lateral Sclerosis. 103730 - Mike Wong, Paul Previde, Jack Cole, Brook Thomas, Nayana Laxmeshwar, Emily K. Mallory, Jake Lever

, Dragutin Petkovic, Russ B. Altman, Anagha Kulkarni:
Search and visualization of gene-drug-disease interactions for pharmacogenomics and precision medicine research using GeneDive. 103732 - Mehdi Mirzapour, Amine Abdaoui, Andon Tchechmedjiev, William Digan, Sandra Bringay, Clément Jonquet:

French FastContext: A publicly accessible system for detecting negation, temporality and experiencer in French clinical notes. 103733 - Maya Schvetz, Lior Fuchs, Victor Novack

, Robert Moskovitch:
Outcomes prediction in longitudinal data: Study designs evaluation, use case in ICU acquired sepsis. 103734 - Jianfei Cui, He Zhu, Hao Deng, Ziwei Chen, Dianbo Liu:

FeARH: Federated machine learning with anonymous random hybridization on electronic medical records. 103735 - Yun Yang, Jing Guo, Pei Wang

, Yaowei Wang, Minghao Yu, Xiang Wang, Po Yang, Liang Sun:
Reservoir hosts prediction for COVID-19 by hybrid transfer learning model. 103736 - Essam A. Rashed

, Sachiko Kodera
, Hidenobu Shirakami, Ryotetsu Kawaguchi, Kazuhiro Watanabe, Akimasa Hirata:
Knowledge discovery from emergency ambulance dispatch during COVID-19: A case study of Nagoya City, Japan. 103743 - Yan Huang, Xiaojin Li

, Guo-Qiang Zhang:
ELII: A novel inverted index for fast temporal query, with application to a large Covid-19 EHR dataset. 103744 - Jimmy S. Chen, William R. Hersh:

A comparative analysis of system features used in the TREC-COVID information retrieval challenge. 103745 - Thomas Ferté, Sébastien Cossin

, Thierry Schaeverbeke, Thomas Barnetche, Vianney Jouhet
, Boris P. Hejblum
:
Automatic phenotyping of electronical health record: PheVis algorithm. 103746 - Vicente Miguel Giménez-Solano, José Alberto Maldonado

, Diego Boscá, Santiago Salas-García, Montserrat Robles:
Definition and validation of SNOMED CT subsets using the expression constraint language. 103747
- Juan Zhao, Monika E. Grabowska

, Vern Eric Kerchberger, Joshua C. Smith
, H. Nur Eken, QiPing Feng
, Josh F. Peterson
, S. Trent Rosenbloom, Kevin B. Johnson, Wei-Qi Wei:
ConceptWAS: A high-throughput method for early identification of COVID-19 presenting symptoms and characteristics from clinical notes. 103748 - Thomas F. Byrd IV, Jane S. Kim

, Chen Yeh
, Jungwha Lee, Kevin J. O'Leary:
Technology acceptance and critical mass: Development of a consolidated model to explain the actual use of mobile health care communication tools. 103749
- Hong Sun

, Dörthe Arndt, Jos De Roo, Erik Mannens:
Predicting future state for adaptive clinical pathway management. 103750
- Osama Shahid, Mohammad Nasajpour, Seyedamin Pouriyeh, Reza M. Parizi, Meng Han, Maria Valero, Fangyu Li

, Mohammed Aledhari, Quan Z. Sheng
:
Machine learning research towards combating COVID-19: Virus detection, spread prevention, and medical assistance. 103751
- Hunsik Shin, Jehyuk Lee

, Yongdae An, Sungzoon Cho:
A scoring model to detect abusive medical institutions based on patient classification system: Diagnosis-related group and ambulatory patient group. 103752 - Wilson Estécio Marcílio-Jr, Danilo Medeiros Eler, Rogério Eduardo Garcia

, Ronaldo C. M. Correia, Rafael M. B. Rodrigues:
Visual analytics of COVID-19 dissemination in São Paulo state, Brazil. 103753 - Gang Yu, Zhongzhi Yu, Yemin Shi, Yingshuo Wang, Xiaoqing Liu, Zheming Li, Yonggen Zhao, Fenglei Sun, Yizhou Yu, Qiang Shu:

Identification of pediatric respiratory diseases using a fine-grained diagnosis system. 103754 - Eric Prud'hommeaux, Josh Collins

, David Booth, Kevin J. Peterson, Harold R. Solbrig, Guoqian Jiang:
Development of a FHIR RDF data transformation and validation framework and its evaluation. 103755 - Mark A. Zaydman, Jonathan R. Brestoff

, Ronald Jackups Jr.:
Using information theory to optimize a diagnostic threshold to match physician-ordering practice. 103756 - Hedenir Monteiro Pinheiro, Ronaldo Martins da Costa:

Pupillary light reflex as a diagnostic aid from computational viewpoint: A systematic literature review. 103757 - Yingxiang Huang, Xiaoqian Jiang, Rodney A. Gabriel, Lucila Ohno-Machado

:
Calibrating predictive model estimates in a distributed network of patient data. 103758 - Lauren L. Staples, Morgan Tamayo, Bryan D. Yockey, Jessica M. Rudd

, Nicole Hill, Scott J. Fontana, Herman E. Ray
, Joe DeMaio:
Characterizing managing physicians by claims sequences in episodes of care. 103759
- Enrique Tomás Martínez Beltrán

, Mario Quiles Pérez
, Javier Pastor-Galindo
, Pantaleone Nespoli, Félix Jesús García Clemente
, Félix Gómez Mármol:
COnVIDa: COVID-19 multidisciplinary data collection and dashboard. 103760
- Kevin Lybarger

, Mari Ostendorf, Matthew Thompson, Meliha Yetisgen
:
Extracting COVID-19 diagnoses and symptoms from clinical text: A new annotated corpus and neural event extraction framework. 103761 - Yan Jia, Tom Lawton

, John Burden
, John A. McDermid
, Ibrahim Habli:
Safety-driven design of machine learning for sepsis treatment. 103762 - Jaime Lynn Speiser:

A random forest method with feature selection for developing medical prediction models with clustered and longitudinal data. 103763
- Muhammed Abd-Elnaby

, Marco Alfonse
, Mohamed Roushdy
:
Classification of breast cancer using microarray gene expression data: A survey. 103764
- Tara T. Helmer, Adam A. Lewis

, Mark McEver
, Francesco Delacqua, Cindy L. Pastern, Nan Kennedy
, Terri L. Edwards, Beverly O. Woodward
, Paul A. Harris:
Creating and implementing a COVID-19 recruitment Data Mart. 103765
- Nikolaos Stylianou

, Ioannis P. Vlahavas:
TransforMED: End-to-Εnd Transformers for Evidence-Based Medicine and Argument Mining in medical literature. 103767 - David Cuadrado

, David Riaño
, Josep Gómez
, Alejandro Rodríguez
, María Bodí:
Methods and measures to quantify ICU patient heterogeneity. 103768
- Benjamin T. Burdorf

:
Letter to Editor: An argument for a universal health record. 103769 - Aya Gamal

, Sherif I. Barakat, Amira Rezk
:
Letter to Editor (Response from author): Toward a universal electronic health record system. 103770
- Hao Liu

, Chi Yuan, Alex M. Butler, Yingcheng Sun
, Chunhua Weng:
A knowledge base of clinical trial eligibility criteria. 103771 - Sarah DeLozier, Sarah Bland

, Melissa McPheeters
, Quinn Stanton Wells, Eric Farber-Eger
, Cosmin Adrian Bejan
, Daniel Fabbri
, S. Trent Rosenbloom, Dan M. Roden, Kevin B. Johnson, Wei-Qi Wei, Josh F. Peterson
, Lisa Bastarache:
Phenotyping coronavirus disease 2019 during a global health pandemic: Lessons learned from the characterization of an early cohort. 103777
- Amy Junghyun Lee

, Kyung Won Kim, Youngbin Shin, Jiwoo Lee, Hyo Jung Park, Young Chul Cho, Yousun Ko, Yu Sub Sung, Byung Sun Yoon:
CDISC-compliant clinical trial imaging management system with automatic verification and data Transformation: Focusing on tumor response assessment data in clinical trials. 103782
- Mervin Joe Thomas

, Vishnu Lal
, Ajith Kurian Baby, Muhammad Rabeeh VP
, Alosh James
, Arun K. Raj
:
Can technological advancements help to alleviate COVID-19 pandemic? a review. 103787

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