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ORCIDLucila Ohno-Machado
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- affiliation: University of California San Diego, Division of Medial Informatics
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2020 – today
- 2024
[j185]Roger Lacson
, Yufei Yu, Tsung-Ting Kuo, Lucila Ohno-Machado:
Biomedical blockchain with practical implementations and quantitative evaluations: a systematic review. J. Am. Medical Informatics Assoc. 31(6): 1423-1435 (2024)- [j184]Thomas J. S. Durant, Elizabeth Knight, Brent G. Nelson, Sarah Dudgeon, Seung J. Lee, Dominic Walliman, Hobart P. Young, Lucila Ohno-Machado, Wade L. Schulz:
A primer for quantum computing and its applications to healthcare and biomedical research. J. Am. Medical Informatics Assoc. 31(8): 1774-1784 (2024) - [i8]Aidan Gilson, Xuguang Ai, Qianqian Xie, Sahana Srinivasan, Krithi Pushpanathan, Maxwell B. Singer, Jimin Huang, Hyunjae Kim, Erping Long, Peixing Wan, Luciano V. Del Priore, Lucila Ohno-Machado, Hua Xu, Dianbo Liu, Ron A. Adelman, Yih-Chung Tham, Qingyu Chen:
Language Enhanced Model for Eye (LEME): An Open-Source Ophthalmology-Specific Large Language Model. CoRR abs/2410.03740 (2024) - 2023
- [j183]Brad Morse, Katherine K. Kim, Zixuan Xu, Cynthia G. Matsumoto, Lisa M. Schilling, Lucila Ohno-Machado, Selene S. Mak, Michelle S. Keller:
Patient and researcher stakeholder preferences for use of electronic health record data: a qualitative study to guide the design and development of a platform to honor patient preferences. J. Am. Medical Informatics Assoc. 30(6): 1137-1149 (2023) - [j182]Tsung-Ting Kuo, Anh Pham, Maxim E. Edelson, Jihoon Kim, Jason Chan, Yash Gupta, Lucila Ohno-Machado, David M. Anderson, Chandrasekar Balacha, Tyler Bath, Sally L. Baxter, Andrea Becker-Pennrich, Douglas S. Bell, Elmer V. Bernstam, Ngan Chau, Michele E. Day, Jason N. Doctor, Scott L. DuVall, Robert El-Kareh, Renato Florian, Robert W. Follett, Benjamin P. Geisler, Alessandro Ghigi, Assaf Gottlieb, Ludwig Christian G. Hinske, Zhaoxian Hu, Diana Ir, Xiaoqian Jiang, Katherine K. Kim, Tara K. Knight, Jejo D. Koola, Nelson Lee, Ulrich Mansmann, Michael E. Matheny, Daniella Meeker, Zongyang Mou, Larissa Neumann, Nghia H. Nguyen, Nick Anderson, Eunice Park, Paulina Paul, Mark J. Pletcher, Kai W. Post, Clemens Rieder, Clemens Scherer, Lisa M. Schilling, Andrey Soares, Spencer L. SooHoo, Ekin Soysal, Steven Covington, Brian Tep, Brian Toy, Baocheng Wang, Zhen R. Wu, Hua Xu, Yong K. Choi, Kai Zheng, Yujia Zhou, Rachel A Zucker:
Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions. J. Am. Medical Informatics Assoc. 30(6): 1167-1178 (2023) - [j181]William W. Stead, Randolph A. Miller, Lucila Ohno-Machado, Suzanne Bakken:
JAMIA at 30: looking back and forward. J. Am. Medical Informatics Assoc. 31(1): 1-9 (2023) - [j180]Lucila Ohno-Machado, Xiaoqian Jiang, Tsung-Ting Kuo, Shiqiang Tao, Luyao Chen, Pritham Ram, Guo-Qiang Zhang, Hua Xu:
A hierarchical strategy to minimize privacy risk when linking "De-identified" data in biomedical research consortia. J. Biomed. Informatics 139: 104322 (2023) - 2022
- [j179]Tsung-Ting Kuo, Lucila Ohno-Machado:
NLM's sponsorship of research in biomedical informatics (1985-2016). Inf. Serv. Use 42(1): 61-70 (2022) - [j178]Christoph U. Lehmann, Patricia F. Brennan, Don E. Detmer, Gretchen P. Jackson, Lucila Ohno-Machado, Charles Safran, Jeffrey J. Williamson, Edward H. Shortliffe:
A tribute to Karen Greenwood and her contributions to the American Medical Informatics Association. J. Am. Medical Informatics Assoc. 29(5): 1011-1013 (2022) - [j177]Cynthia Triplett, Burgundy J. Fletcher, Riley Taitingfong, Ying Zhang, Tauqeer Ali, Lucila Ohno-Machado, Cinnamon S. Bloss:
Codesigning a community-based participatory research project to assess tribal perspectives on privacy and health data sharing: A report from the Strong Heart Study. J. Am. Medical Informatics Assoc. 29(6): 1120-1127 (2022) - [j176]Fatemeh Amrollahi, Supreeth Prajwal Shashikumar, Angela Meier, Lucila Ohno-Machado, Shamim Nemati, Gabriel Wardi:
Inclusion of social determinants of health improves sepsis readmission prediction models. J. Am. Medical Informatics Assoc. 29(7): 1263-1270 (2022) - [j175]Ken Wiley, Laura Findley, Madison Goldrich, Tejinder K. Rakhra-Burris, Ana Stevens, Pamela Williams, Carol J. Bult, Rex L. Chisholm, Patricia Deverka, Geoffrey S. Ginsburg, Eric D. Green, Gail P. Jarvik, George A. Mensah, Erin Ramos, Mary V. Relling, Dan M. Roden, Robb Rowley, Gil Alterovitz, Samuel J. Aronson, Lisa Bastarache, James J. Cimino, Erin L. Crowgey, Guilherme Del Fiol, Robert R. Freimuth, Mark A. Hoffman, Janina M. Jeff, Kevin B. Johnson, Kensaku Kawamoto, Subha Madhavan, Eneida A. Mendonça, Lucila Ohno-Machado, Siddharth Pratap, Casey Overby Taylor, Marylyn D. Ritchie, Nephi Walton, Chunhua Weng, Teresa Zayas-Cabán, Teri A. Manolio, Marc S. Williams:
A research agenda to support the development and implementation of genomics-based clinical informatics tools and resources. J. Am. Medical Informatics Assoc. 29(8): 1342-1349 (2022) - [j174]Tsung-Ting Kuo, Xiaoqian Jiang, Haixu Tang, XiaoFeng Wang, Arif Ozgun Harmanci, Miran Kim, Kai W. Post, Diyue Bu, Tyler Bath, Jihoon Kim, Weijie Liu, Hongbo Chen, Lucila Ohno-Machado:
The evolving privacy and security concerns for genomic data analysis and sharing as observed from the iDASH competition. J. Am. Medical Informatics Assoc. 29(12): 2182-2190 (2022) - [j173]Andrea H. Ramirez, Lina M. Sulieman, David J. Schlueter, Alese E. Halvorson, Jun Qian, Francis Ratsimbazafy, Roxana Loperena-Cortes, Kelsey R. Mayo, Melissa A. Basford, Nicole Deflaux, Karthik Muthuraman, Karthik Natarajan, Abel N. Kho, Hua Xu, Consuelo H. Wilkins, Hoda Anton-Culver, Eric Boerwinkle, Mine Cicek, Cheryl R. Clark, Elizabeth Cohn, Lucila Ohno-Machado, Sheri D. Schully, Brian K. Ahmedani, Maria Argos, Robert M. Cronin, Christopher J. O'Donnell, Mona Fouad, David B. Goldstein, Philip Greenland, Scott J. Hebbring, Elizabeth W. Karlson, Parinda Khatri, Bruce Korf, Jordan W. Smoller, Stephen Sodeke, John Wilbanks, Justin Hentges, Stephen Mockrin, Christopher Lunt, Stephanie A. Devaney, Kelly Gebo, Joshua C. Denny, Robert J. Carroll, David Glazer, Paul A. Harris, George Hripcsak, Anthony A. Philippakis, Dan M. Roden:
The All of Us Research Program: Data quality, utility, and diversity. Patterns 3(8): 100570 (2022) - [j172]Wenrui Dai, Xiaoqian Jiang, Luca Bonomi, Yong Li, Hongkai Xiong, Lucila Ohno-Machado:
VERTICOX: Vertically Distributed Cox Proportional Hazards Model Using the Alternating Direction Method of Multipliers. IEEE Trans. Knowl. Data Eng. 34(2): 996-1010 (2022) - [c119]Sharon E. Davis, Henry Ssemaganda, Jejo Koola, Jialin Mao, Dax M. Westerman, Theodore Speroff, Usha Govindarajulu, Craig Ramsay, Lucila Ohno-Machado, Frederic S. Resnic, Michael E. Matheny:
A Framework for Generating Synthetic Clinical Datasets with Learning Effects to Support Methods Development and Validation. AMIA 2022 - [c118]Jejo D. Koola, Jialin Mao, Sharon E. Davis, Henry Ssemaganda, Dax M. Westerman, Lucila Ohno-Machado, Frederic S. Resnic, Michael E. Matheny:
A Framework for Detecting Medical Device Safety Signals Confounded by Learning Effects Using Machine Learning. AMIA 2022 - [c117]Tsung-Ting Kuo, Xiaoqian Jiang, Hua Xu, Li Xiong, Lucila Ohno-Machado:
Existing and emerging privacy challenges and solutions for federated data coordination. AMIA 2022 - [c116]Henry Ssemaganda, Frederic S. Resnic, Sharon E. Davis, Usha Govindarajulu, Jejo Koola, Jialin Mao, Dax M. Westerman, Theodore Speroff, Craig Ramsay, Art Sedrakyan, Lucila Ohno-Machado, Michael E. Matheny:
Disentangling and Characterizing Device Safety Signals and Learning Effects. AMIA 2022 - [c115]Shiqiang Tao, Wei-Chun Chou, Jianfu Li, Jingcheng Du, Pritham Ram, Rashmie Abeysinghe, Hua Xu, Xiaoqian Jiang, Peter W. Rose, Lucila Ohno-Machado, Guo-Qiang Zhang:
IMI-CDE: an interactive interface for collaborative mapping of study variables to common data elements. ICHI 2022: 465-468 - 2021
- [j171]Xu Zuo, Yong Chen, Lucila Ohno-Machado, Hua Xu:
How do we share data in COVID-19 research? A systematic review of COVID-19 datasets in PubMed Central Articles. Briefings Bioinform. 22(2): 800-811 (2021) - [j170]Tsung-Ting Kuo, Tyler Bath, Shuaicheng Ma, Nicholas D. Pattengale, Meng Yang, Yang Cao, Corey M. Hudson, Jihoon Kim, Kai W. Post, Li Xiong, Lucila Ohno-Machado:
Benchmarking blockchain-based gene-drug interaction data sharing methods: A case study from the iDASH 2019 secure genome analysis competition blockchain track. Int. J. Medical Informatics 154: 104559 (2021) - [j169]Subha Madhavan, Lisa Bastarache, Jeffrey S. Brown, Atul J. Butte, David A. Dorr, Peter J. Embí, Charles P. Friedman, Kevin B. Johnson, Jason H. Moore, Isaac S. Kohane, Philip R. O. Payne, Jessica D. Tenenbaum, Mark G. Weiner, Adam B. Wilcox, Lucila Ohno-Machado:
Use of electronic health records to support a public health response to the COVID-19 pandemic in the United States: a perspective from 15 academic medical centers. J. Am. Medical Informatics Assoc. 28(2): 393-401 (2021) - [j168]Jihoon Kim, Larissa Neumann, Paulina Paul, Michele E. Day, Michael Aratow, Douglas S. Bell, Jason N. Doctor, Ludwig Christian G. Hinske, Xiaoqian Jiang, Katherine K. Kim, Michael E. Matheny, Daniella Meeker, Mark J. Pletcher, Lisa M. Schilling, Spencer L. SooHoo, Hua Xu, Kai Zheng, Lucila Ohno-Machado:
Privacy-protecting, reliable response data discovery using COVID-19 patient observations. J. Am. Medical Informatics Assoc. 28(8): 1765-1776 (2021) - [j167]Yingxiang Huang, Xiaoqian Jiang, Rodney A. Gabriel, Lucila Ohno-Machado:
Calibrating predictive model estimates in a distributed network of patient data. J. Biomed. Informatics 117: 103758 (2021) - [c114]Xiaoqian Jiang, Luca Bonomi, Jaideep Vaidya, Li Xiong, Lucila Ohno-Machado:
Privacy-Preserving Federated Biomedical Data Analysis. AMIA 2021 - [c113]Anh Pham, Robert El-Kareh, Lucila Ohno-Machado, Tsung-Ting Kuo:
Early Prediction of Positive Clostridioides Difficile Test Results. AMIA 2021 - 2020
- [j166]Sally L. Baxter, Helena E. Gali, Michael F. Chiang, Michelle R. Hribar, Lucila Ohno-Machado, Robert El-Kareh, Abigail E. Huang, Heather E. Chen, Andrew Camp, Don O. Kikkawa, Bobby S. Korn, Jeffrey E. Lee, Christopher A. Longhurst, Marlene Millen:
Promoting Quality Face-to-Face Communication during Ophthalmology Encounters in the Electronic Health Record Era. Appl. Clin. Inform. 11(01): 130-141 (2020) - [j165]Jason N. Doctor, Jaideep Vaidya, Xiaoqian Jiang, Shuang Wang, Lisa M. Schilling, Toan Ong, Michael E. Matheny, Lucila Ohno-Machado, Daniella Meeker:
Efficient determination of equivalence for encrypted data. Comput. Secur. 97: 101939 (2020) - [j164]Luca Bonomi, Xiaoqian Jiang, Lucila Ohno-Machado:
Protecting patient privacy in survival analyses. J. Am. Medical Informatics Assoc. 27(3): 366-375 (2020) - [j163]Yingxiang Huang, Wentao Li, Fima Macheret, Rodney A. Gabriel, Lucila Ohno-Machado:
A tutorial on calibration measurements and calibration models for clinical prediction models. J. Am. Medical Informatics Assoc. 27(4): 621-633 (2020) - [j162]Tsung-Ting Kuo, Rodney A. Gabriel, Krishna R. Cidambi, Lucila Ohno-Machado:
EXpectation Propagation LOgistic REgRession on permissioned blockCHAIN (ExplorerChain): decentralized online healthcare/genomics predictive model learning. J. Am. Medical Informatics Assoc. 27(5): 747-756 (2020) - [j161]Xiao Dong, Jianfu Li, Ekin Soysal, Jiang Bian, Scott L. DuVall, Elizabeth Hanchrow, Hongfang Liu, Kristine E. Lynch, Michael E. Matheny, Karthik Natarajan, Lucila Ohno-Machado, Serguei Pakhomov, Ruth Madeleine Reeves, Amy M. Sitapati, Swapna Abhyankar, Theresa Cullen, Jami Deckard, Xiaoqian Jiang, Robert Murphy, Hua Xu:
COVID-19 TestNorm: A tool to normalize COVID-19 testing names to LOINC codes. J. Am. Medical Informatics Assoc. 27(9): 1437-1442 (2020) - [j160]Riley Taitingfong, Cinnamon S. Bloss, Cynthia Triplett, Julie Cakici, Nanibaa' Garrison, Shelley Cole, Julie A. Stoner, Lucila Ohno-Machado:
A systematic literature review of Native American and Pacific Islanders' perspectives on health data privacy in the United States. J. Am. Medical Informatics Assoc. 27(12): 1987-1998 (2020) - [j159]Miran Kim, Junghye Lee, Lucila Ohno-Machado, Xiaoqian Jiang:
Secure and Differentially Private Logistic Regression for Horizontally Distributed Data. IEEE Trans. Inf. Forensics Secur. 15: 695-710 (2020) - [c112]Jihoon Kim, Paulina Paul, Pravina Kota, Yu R. Park, Julie A. Stoner, Wenyu Wang, Ying Zhang, Elisa Lee, Lucila Ohno-Machado:
Longitudinal Cohort Data Transformation Based on a Common Data Model and Metadata Standards: Examples from the Strong Heart Study. AMIA 2020
2010 – 2019
- 2019
- [j158]Tsung-Ting Kuo, Rodney A. Gabriel, Lucila Ohno-Machado:
Fair compute loads enabled by blockchain: sharing models by alternating client and server roles. J. Am. Medical Informatics Assoc. 26(5): 392-403 (2019) - [j157]Olivier Harismendy, Jihoon Kim, Xiaojun Xu, Lucila Ohno-Machado:
Evaluating and sharing global genetic ancestry in biomedical datasets. J. Am. Medical Informatics Assoc. 26(5): 457-461 (2019) - [j156]Tsung-Ting Kuo, Hugo Zavaleta Rojas, Lucila Ohno-Machado:
Comparison of blockchain platforms: a systematic review and healthcare examples. J. Am. Medical Informatics Assoc. 26(5): 462-478 (2019) - [c111]Luca Bonomi, Xiaoqian Jiang, Lucila Ohno-Machado:
Protecting Patient Privacy in Survival Analyses. AMIA 2019 - [c110]Yong Kyung Choi, Javier E. Lopez, Daniella Meeker, Lucila Ohno-Machado, Katherine K. Kim:
Engaging heart failure patients from a clinical data research network: A survey on willingness to participate in different types of research. AMIA 2019 - [c109]Xiaoqian Jiang, Luca Bonomi, Lucila Ohno-Machado:
VERTICOX: Vertically Distributed Cox Proportional Hazards Model. AMIA 2019 - [c108]Tsung-Ting Kuo, Amar Das, Kim Augustine, Peng Dana Zhang, Lucila Ohno-Machado:
Current Applications of Blockchain Technology in Biomedical Research and Healthcare. AMIA 2019 - [e1]Lucila Ohno-Machado, Brigitte Séroussi:
MEDINFO 2019: Health and Wellbeing e-Networks for All - Proceedings of the 17th World Congress on Medical and Health Informatics, Lyon, France, 25-30 August 2019. Studies in Health Technology and Informatics 264, IOS Press 2019, ISBN 978-1-64368-002-6 [contents] - 2018
- [j155]Wei Wei, Zhanglong Ji, Yupeng He, Kai Zhang, Yuanchi Ha, Qi Li, Lucila Ohno-Machado:
Finding relevant biomedical datasets: the UC San Diego solution for the bioCADDIE Retrieval Challenge. Database J. Biol. Databases Curation 2018: bay017 (2018) - [j154]Feng Chen, Xiaoqian Jiang, Shuang Wang, Lisa M. Schilling, Daniella Meeker, Toan Ong, Michael E. Matheny, Jason N. Doctor, Lucila Ohno-Machado, Jaideep Vaidya:
Perfectly Secure and Efficient Two-Party Electronic-Health-Record Linkage. IEEE Internet Comput. 22(2): 32-41 (2018) - [j153]Lucila Ohno-Machado:
Special Focus on Biomedical Data Science. J. Am. Medical Informatics Assoc. 25(1): 1 (2018) - [j152]Patricia Flatley Brennan, Michael F. Chiang, Lucila Ohno-Machado:
Biomedical informatics and data science: evolving fields with significant overlap. J. Am. Medical Informatics Assoc. 25(1): 2-3 (2018) - [j151]Lucila Ohno-Machado:
Informatics systems for health care providers, patients, and families. J. Am. Medical Informatics Assoc. 25(2): 110 (2018) - [j150]Lucila Ohno-Machado:
Clinical research informatics: a growing subspecialization of biomedical informatics. J. Am. Medical Informatics Assoc. 25(3): 223 (2018) - [j149]Xiaoling Chen, Anupama E. Gururaj, Ibrahim Burak Özyurt, Ruiling Liu, Ergin Soysal, Trevor Cohen, Firat Tiryaki, Yueling Li, Nansu Zong, Min Jiang, Deevakar Rogith, Mandana Salimi, Hyeon-Eui Kim, Philippe Rocca-Serra, Alejandra N. González-Beltrán, Claudiu Farcas, Todd Johnson, Ronald Margolis, George Alter, Susanna-Assunta Sansone, Ian Fore, Lucila Ohno-Machado, Jeffrey S. Grethe, Hua Xu:
DataMed - an open source discovery index for finding biomedical datasets. J. Am. Medical Informatics Assoc. 25(3): 300-308 (2018) - [j148]Ram Dixit, Deevakar Rogith, Vidya Narayana, Mandana Salimi, Anupama E. Gururaj, Lucila Ohno-Machado, Hua Xu, Todd R. Johnson:
User needs analysis and usability assessment of DataMed - a biomedical data discovery index. J. Am. Medical Informatics Assoc. 25(3): 337-344 (2018) - [j147]Lucila Ohno-Machado:
Enabling patients to be active participants in healthcare via informatics interventions. J. Am. Medical Informatics Assoc. 25(4): 369 (2018) - [j146]Lucila Ohno-Machado:
Clinical decision support: informatics interventions for better patient care. J. Am. Medical Informatics Assoc. 25(5): 457 (2018) - [j145]Lucila Ohno-Machado:
Electronic health records and health information exchange. J. Am. Medical Informatics Assoc. 25(6): 617 (2018) - [j144]Lucila Ohno-Machado:
The role of informatics in promoting patient safety. J. Am. Medical Informatics Assoc. 25(7): 773 (2018) - [j143]Lucila Ohno-Machado:
Informatics for all: from provider- to patient-based applications that can include family and friends. J. Am. Medical Informatics Assoc. 25(8): 923 (2018) - [j142]Lucila Ohno-Machado:
Sharing data from electronic health records within, across, and beyond healthcare institutions: Current trends and perspectives. J. Am. Medical Informatics Assoc. 25(9): 1113 (2018) - [j141]Lucila Ohno-Machado:
Data science and artificial intelligence to improve clinical practice and research. J. Am. Medical Informatics Assoc. 25(10): 1273 (2018) - [j140]Lucila Ohno-Machado:
Clinical informatics applications of medication reconciliation, decision support systems, and online portal patient-provider communications. J. Am. Medical Informatics Assoc. 25(11): 1431 (2018) - [j139]Lucila Ohno-Machado:
A diversified informatics portfolio covering health sciences and healthcare. J. Am. Medical Informatics Assoc. 25(12): 1583 (2018) - [j138]Lucila Ohno-Machado:
Reflections on the journey of editing a scientific journal. J. Am. Medical Informatics Assoc. 25(12): 1584-1585 (2018) - [i7]Tsung-Ting Kuo, Lucila Ohno-Machado:
ModelChain: Decentralized Privacy-Preserving Healthcare Predictive Modeling Framework on Private Blockchain Networks. CoRR abs/1802.01746 (2018) - [i6]Jason N. Doctor, Jaideep Vaidya, Xiaoqian Jiang, Shuang Wang, Lisa M. Schilling, Toan Ong, Michael E. Matheny, Lucila Ohno-Machado, Daniella Meeker:
Efficient Determination of Equivalence for Encrypted Data. CoRR abs/1803.03760 (2018) - [i5]Tsung-Ting Kuo, Jina Huh, Jihoon Kim, Robert E. El-Kareh, Siddharth Singh, Stephanie Feudjio Feupe, Vincent Kuri, Gordon Lin, Michele E. Day, Lucila Ohno-Machado, Chun-Nan Hsu:
The Impact of Automatic Pre-annotation in Clinical Note Data Element Extraction - the CLEAN Tool. CoRR abs/1808.03806 (2018) - 2017
- [j137]Christian Hinske, Felipe R. C. dos Santos, Daniel T. Ohara, Lucila Ohno-Machado, Simone Kreth, Pedro A. F. Galante:
MiRIAD update: using alternative polyadenylation, protein interaction network analysis and additional species to enhance exploration of the role of intragenic miRNAs and their host genes. Database J. Biol. Databases Curation 2017: bax053 (2017) - [j136]Trevor Cohen, Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, George Alter, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Hua Xu:
A publicly available benchmark for biomedical dataset retrieval: the reference standard for the 2016 bioCADDIE dataset retrieval challenge. Database J. Biol. Databases Curation 2017: bax061 (2017) - [j135]Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Trevor Cohen, Hua Xu:
Information retrieval for biomedical datasets: the 2016 bioCADDIE dataset retrieval challenge. Database J. Biol. Databases Curation 2017: bax068 (2017) - [j134]Feng Chen, Shuang Wang, Xiaoqian Jiang, Sijie Ding, Yao Lu, Jihoon Kim, Süleyman Cenk Sahinalp, Chisato Shimizu, Jane C. Burns, Victoria J. Wright, Eileen Png, Martin L. Hibberd, David D. Lloyd, Hai Yang, Amalio Telenti, Cinnamon S. Bloss, Dov Fox, Kristin E. Lauter, Lucila Ohno-Machado:
PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS. Bioinform. 33(6): 871-878 (2017) - [j133]Meng Wang, Zhanglong Ji, Shuang Wang, Jihoon Kim, Hai Yang, Xiaoqian Jiang, Lucila Ohno-Machado:
Mechanisms to protect the privacy of families when using the transmission disequilibrium test in genome-wide association studies. Bioinform. 33(23): 3716-3725 (2017) - [j132]Lucila Ohno-Machado:
Using health information technology for clinical decision support and predictive analytics. J. Am. Medical Informatics Assoc. 24(1): 1 (2017) - [j131]Lucila Ohno-Machado:
Health information technology and patient safety. J. Am. Medical Informatics Assoc. 24(2): 243 (2017) - [j130]Hyeoneui Kim, Elizabeth A. Bell, Jihoon Kim, Amy M. Sitapati, Joe Ramsdell, Claudiu Farcas, Dexter Friedman, Stephanie Feudjio Feupe, Lucila Ohno-Machado:
iCONCUR: informed consent for clinical data and bio-sample use for research. J. Am. Medical Informatics Assoc. 24(2): 380-387 (2017) - [j129]Lucila Ohno-Machado:
Advancing healthcare and biomedical research via new data-driven approaches. J. Am. Medical Informatics Assoc. 24(3): 471 (2017) - [j128]Lucila Ohno-Machado:
Education of informatics professionals and development of electronic information resources for clinicians, patients, health scientists, and study participants. J. Am. Medical Informatics Assoc. 24(4): 679 (2017) - [j127]Jean Louis Raisaro, Florian Tramèr, Zhanglong Ji, Diyue Bu, Yongan Zhao, W. Knox Carey, David D. Lloyd, Heidi Sofia, Dixie Baker, Paul Flicek, Suyash S. Shringarpure, Carlos D. Bustamante, Shuang Wang, Xiaoqian Jiang, Lucila Ohno-Machado, Haixu Tang, XiaoFeng Wang, Jean-Pierre Hubaux:
Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks. J. Am. Medical Informatics Assoc. 24(4): 799-805 (2017) - [j126]Lucila Ohno-Machado:
Understanding and mitigating the digital divide in health care. J. Am. Medical Informatics Assoc. 24(5): 881 (2017) - [j125]Lucila Ohno-Machado:
JAMIA is going green. J. Am. Medical Informatics Assoc. 24(6): 1045 (2017) - [j124]Tsung-Ting Kuo, Hyeon-Eui Kim, Lucila Ohno-Machado:
Blockchain distributed ledger technologies for biomedical and health care applications. J. Am. Medical Informatics Assoc. 24(6): 1211-1220 (2017) - [j123]Lucila Ohno-Machado:
Electronic health records: usability and utilization by health care providers and patients. J. Am. Medical Informatics Assoc. 24(e1): e1 (2017) - [j122]Kathleen M. Jagodnik, Simon Koplev, Sherry L. Jenkins, Lucila Ohno-Machado, Benedict Paten, Stephan C. Schürer, Michel Dumontier, Ruben Verborgh, Alex Bui, Peipei Ping, Neil J. McKenna, Ravi K. Madduri, Ajay Pillai, Avi Ma'ayan:
Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop. J. Biomed. Informatics 71: 49-57 (2017) - [c107]Douglas S. Bell, Lisa Dahm, Nick R. Anderson, Ida Sim, Pralav P. Dessai, Marianne Zachariah, Lucila Ohno-Machado:
Self-Service Cohort Discovery across Five Academic Health Centers: Usage and User Evaluations of the University of California Research eXchange. AMIA 2017 - [c106]Elizabeth A. Bell, Diana Guijarro, Imho Jang, Wenhong Zhu, Tyler Bath, Gwangnoh Yun, Masud Rahman, Chao Jiang, Xiaoqian Jiang, Lucila Ohno-Machado, Hyeoneui Kim:
Honoring Patient's Data Sharing Preferences: Implementation Challenges. AMIA 2017 - [c105]Xiaoling Chen, Jun Xu, Jingqi Wang, Anupama E. Gururaj, Lucila Ohno-Machado, Hua Xu:
A Natural Language Processing System for Biomedical Dataset Retrieval. AMIA 2017 - [c104]Ram Dixit, Deevakar Rogith, Vidya Narayana, Mandana Salimi, Anupama E. Gururaj, Lucila Ohno-Machado, Hua Xu, Todd R. Johnson:
Meeting User Needs for a Data Discovery Index of Biomedical Big Data. AMIA 2017 - [c103]Chao Jiang, Xiaoqian Jiang, Shuang Wang, Diana Guijarro, Elizabeth A. Bell, Imho Jang, Gwangnoh Yun, Masud Rahman, Lucila Ohno-Machado, Hyeoneui Kim:
MALTASE: a Mobile AppLication To improve patients' Access to their data Sharing preferencE. AMIA 2017 - [c102]Katherine K. Kim, Lucila Ohno-Machado:
Consumer Views of Electronic Health and Genetic Data Sharing: Findings of a National Survey. AMIA 2017 - [c101]Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, Trevor Cohen, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Hua Xu:
Information Retrieval for Biomedical Datasets: The 2016 bioCADDIE Challenge. AMIA 2017 - [c100]Jaideep Vaidya, Basit Shafiq, Muazzam Asani, Nabil R. Adam, Xiaoqian Jiang, Lucila Ohno-Machado:
A Scalable Privacy-preserving Data Generation Methodology for Exploratory Analysis. AMIA 2017 - [c99]Wei Wei, Zhanglong Ji, Lucila Ohno-Machado:
Using a Convolutional Neural Network for Automatic Medical Subject Headings (MeSH) Assignment. AMIA 2017 - [c98]Jonathan Wickes, Hyeoneui Kim, Hyun-Dae Kim, Jihoon Kim, Wenhong Zhu, Lucila Ohno-Machado, Olivier Harismendy:
Project A-G-T-C: Adding Genetic Test data in Clinical data warehouse. AMIA 2017 - [c97]Xiaoqian Jiang, Claudiu Farcas, Benedict Paten, Mark Diekhans, Paul Avillach, Wallace Wadge, David Haussler, Lucila Ohno-Machado, Ida Sim:
Count Everything: Secure Count Query Framework Across Big Data Centers. CRI 2017 - [c96]Hanna Suominen, Henning Müller, Lucila Ohno-Machado, Sanna Salanterä, Günter Schreier, Leif Hanlen:
Prerequisites for International Exchanges of Health Information for Record Research: Comparison of Australian, Austrian, Finnish, Swiss, and US Policies. MedInfo 2017: 1312 - 2016
- [j121]Lucila Ohno-Machado:
Using informatics to engage patients and healthcare providers. J. Am. Medical Informatics Assoc. 23(1): 1 (2016) - [j120]Lucila Ohno-Machado:
A message to the next generation of biomedical informatics professionals. J. Am. Medical Informatics Assoc. 23(2): 241 (2016) - [j119]Yong Li, Xiaoqian Jiang, Shuang Wang, Hongkai Xiong, Lucila Ohno-Machado:
VERTIcal Grid lOgistic regression (VERTIGO). J. Am. Medical Informatics Assoc. 23(3): 570-579 (2016) - [j118]Lucila Ohno-Machado:
Building systems that change clinical practice and advance health sciences research. J. Am. Medical Informatics Assoc. 23(5): 857 (2016) - [j117]Lucila Ohno-Machado:
Data-driven informatics tools targeting patients and providers. J. Am. Medical Informatics Assoc. 23(6): 1039 (2016) - [j116]