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ORCIDInternational Journal of Data Mining and Bioinformatics, Volume 5
Volume 5, Number 1, 2011
- Jun Ding, Yuzhen Gao, Yan He, Yifeng Zhou, Moli Huang
, Haiyan Liu:
Screening SNPs residing in the microRNA-binding sites of Hepatocellular Carcinoma related genes. 1-21 - Qinqin Wu, Jiajun Wang, Hong Yan:
An Improved Position Weight Matrix method based on an entropy measure for the recognition of prokaryotic promoters. 22-37 - Hae-Jin Hu, Robert W. Harrison, Phang C. Tai, Yi Pan:
Understandable learning machine system design for Transmembrane or Embedded Membrane segments prediction. 38-51 - Tamara Polajnar, Simon Rogers, Mark A. Girolami:
Protein interaction detection in sentences via Gaussian Processes: a preliminary evaluation. 52-72 - Jiarui Ding, Jin-Hong Shi, Fang-Xiang Wu:
SVM-RFE based feature selection for tandem mass spectrum quality assessment. 73-88 - Lien-Chin Chen, Philip S. Yu, Vincent S. Tseng:
WF-MSB: A weighted fuzzy-based biclustering method for gene expression data. 89-109 - Malaya Kumar Hota, Vinay Kumar Srivastava:
Improvement in protein-coding region identification based on sliding window trigonometric fast transforms using Singular Value Decomposition. 110-127
Volume 5, Number 2, 2011
- Sejoon Lee, Eunjung Lee, Kwang H. Lee, Doheon Lee:
Predicting disease phenotypes based on the molecular networks with Condition-Responsive Correlation. 131-142 - Stan Pounds, Xueyuan Cao, Cheng Cheng, Jun J. Yang, Dario Campana, Ching-Hon Pui, William E. Evans, Mary Relling:
Integrated analysis of pharmacologic, clinical and SNP microarray data using Projection Onto the Most Interesting Statistical Evidence with Adaptive Permutation Testing. 143-157 - Qing He, Kevin Karsch, Ye Duan:
Semi-automatic 3D segmentation of brain structures from MRI. 158-173 - Yi Lu, Jeffrey L. Ram:
Predictions of flexible C-terminal tethers of bacterial proteins with the FLEXTAIL bioinformatics pipeline. 174-188 - Liang Lan, Slobodan Vucetic:
Improving accuracy of microarray classification by a simple multi-task feature selection filter. 189-208 - Timur Fayruzov, Jeroen Janssen, Dirk Vermeir, Chris Cornelis, Martine De Cock:
Modelling gene and protein regulatory networks with Answer Set Programming. 209-229
Volume 5, Number 3, 2011
- Yoon Soo Pyon, Xin Li, Jing Li:
Cancer progression analysis based on ordinal relationship of cancer stages and co-expression network modularity. 233-251 - Stuart J. Nelson, Kelly Zeng, John Kilbourne:
Building a standards-based and collaborative e-prescribing tool: MyRxPad. 252-265 - Darío Rojas, Luis Rueda, Alioune Ngom, Homero Urrutia, Gerardo Carcamo:
Image segmentation of biofilm structures using optimal multi-level thresholding. 266-286 - Sara Nasser, Aarati R. Ranade, Shravan Sridhart, Lisa Haney, Ronald L. Korn, Michael B. Gotway, Glen J. Weiss, Seungchan Kim:
Biomarkers associated with metastasis of lung cancer to brain predict patient survival. 287-307 - Dayu Lv, Bill Goodwine:
Pancreas modelling by a deterministic optimisation method. 308-320 - Mark J. O'Connor, Anja E. Hauser, Ann M. Haberman, Steven H. Kleinstein:
Activated germinal centre B cells undergo directed migration. 321-331 - Mohammed Al-Shalalfa, Ghada Naji, Ala Qabaja, Reda Alhajj, Jon G. Rokne:
Combining multiple perspective as intelligent agents into robust approach for biomarker detection in gene expression data. 332-350
Volume 5, Number 4, 2011
- Simon K. Poon, Josiah Poon, Martin McGrane, Xuezhong Zhou, Paul Wing Hing Kwan, Runsun Zhang, Baoyan Liu, Junbin Gao, Clement Loy, Kelvin Chan, Daniel Man-yuen Sze:
A novel approach in discovering significant interactions from TCM patient prescription data. 353-368 - Yiqin Wang, Haixia Yan, Rui Guo, Fufeng Li, Chunming Xia, Jianjun Yan, Zhaoxia Xu, Guoping Liu, Jin Xu:
Study on intelligent syndrome differentiation in Traditional Chinese Medicine based on multiple information fusion methods. 369-382 - Mingyu You, Rui-Wei Zhao, Guo-Zheng Li, Xiaohua Hu:
MAPLSC: A novel multi-class classifier for medical diagnosis. 383-401 - Vincent S. Tseng, Hsieh-Hui Yu:
Microarray data classification by multi-information based gene scoring integrated with Gene Ontology. 402-416 - Upadhyayula Suryanarayana Murty, Mutheneni Srinivasa Rao, K. Sriram, K. Madhusudha Rao:
Applications of Self-Organising Map (SOM) for prioritisation of endemic zones of filariasis in Andhra Pradesh, India. 417-427 - Jianping Zhou, Georges G. Grinstein, Kenneth A. Marx:
A heuristic for gene selection and visual prediction of sample type. 428-448 - Watshara Shoombuatong, Patrinee Traisathit, Sukon Prasitwattanaseree, Chatchai Tayapiwatana, Robert W. Cutler, Jeerayut Chaijaruwanich:
Prediction of the disulphide bonding state of cysteines in proteins using Conditional Random Fields. 449-464
Volume 5, Number 5, 2011
- Chuang Ma, Jia Wang, Lun Li, Mo-Jie Duan, Yanhong Zhou:
Identification of true EST alignments for recognising transcribed regions. 465-484 - Qian Xu, Hong Xue, Qiang Yang:
Multi-platform gene-expression mining and marker gene analysis. 485-503 - Dongjun Chung, Hyunjoong Kim:
Robust classification ensemble method for microarray data. 504-518 - Le Lu, Yanda Li, Shao Li:
Computational identification of potential microRNA network biomarkers for the progression stages of gastric cancer. 519-531 - Wen-Ran Zhang, Anand K. Pandurangi, Karl E. Peace, Yan-Qing Zhang, Zhongming Zhao:
MentalSquares: A generic bipolar Support Vector Machine for psychiatric disorder classification, diagnostic analysis and neurobiological data mining. 532-557 - Jesús S. Aguilar-Ruiz, Domingo S. Rodríguez-Baena, Norberto Díaz-Díaz, Isabel A. Nepomuceno-Chamorro:
CarGene: Characterisation of sets of genes based on metabolic pathways analysis. 558-573 - Waren N. Baticados, Noboru Inoue, Chihiro Sugimoto, Hideyuki Nagasawa, Abigail M. Baticados:
Complete coding sequence, sequence analysis and transmembrane topology modelling of Trypanosoma brucei rhodesiense Putative Oligosaccharyl transferase (TbOST II). 574-592
Volume 5, Number 6, 2011
- Peng-Gang Sun, Lin Gao, Jia Song:
Identification of conserved protein complexes by module alignment. 593-610 - Kang Ning, Hoong Kee Ng, Hon Wai Leong:
Analysis of the relationships among Longest Common Subsequences, Shortest Common Supersequences and patterns and its application on pattern discovery in biological sequences. 611-625 - Liupu Wang, Juexin Wang, Michael Wang, Yanchun Liang, Dong Xu:
User experience evaluation of Google search for obtaining medical knowledge: a case study. 626-639 - Yifei Chen, Feng Liu, Bernard Manderick:
A machine learning-based system to normalise gene mentions to unique database identifiers. 640-660 - Rong Jiang, Hong Yan:
Detection and 2-Dimensional display of short tandem repeats based on signal decomposition. 661-690 - Chris Haddow, Justin Perry, Marcus Durrant, Joe Faith:
Predicting functional residues of protein sequence alignments as a feature selection task. 691-705 - Neeta Sarkar-Roy, Debabrata Mondal, Paramita Bhattacharya, Partha Majumder:
A novel statistical algorithm for enhancing the utility of HapMap data to design genomic association studies in non-HapMap populations. 706-716
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