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Computer Physics Communications, Volume 180
Volume 180, Number 1, January 2009
- Hezhu Shao
, Zhongcheng Wang:
Arbitrarily precise numerical solutions of the one-dimensional Schrödinger equation. 1-7 - Benjamin C. Allanach
, Csaba Balázs, Geneviève Bélanger, M. Bernhardt, Fawzi Boudjema
, D. Choudhury, Klaus Desch, Ulrich Ellwanger, Paolo Gambino
, R. Godbole, T. Goto, Jaume Guasch
, M. Guchait, Thomas Hahn, Sven Heinemeyer, Cyril Hugonie, T. Hurth, Sabine Kraml
, Sven Kreiss
, J. Lykken:
SUSY Les Houches Accord 2. 8-25 - Nigel Cundy, Stefan Krieg
, Guido Arnold, Andreas Frommer, Thomas Lippert, Klaus Schilling:
Numerical methods for the QCD overlap operator IV: Hybrid Monte Carlo. 26-54 - Hong Wei Yang:
A FDTD analysis on magnetized plasma of Epstein distribution and reflection calculation. 55-60
- Cong-Feng Qiao, Jian Wang, Jian-Xiong Wang
, Yangheng Zheng:
EtabFDC: An etab event generator in hadroproduction at LHC. 61-68 - Wojciech Broniowski
, Maciej Rybczynski
, Piotr Bozek
:
GLISSANDO: GLauber Initial-State Simulation AND mOre... 69-83 - S. Wheaton, J. Cleymans, M. Hauer:
THERMUS - A thermal model package for ROOT. 84-106 - James Gray, Yang-Hui He
, Anton Ilderton
, André Lukas
:
STRINGVACUA. A Mathematica package for studying vacuum configurations in string phenomenology. 107-119 - G. P. Salam, Juan Rojo
:
A Higher Order Perturbative Parton Evolution Toolkit (HOPPET). 120-156 - Alberto Otero-de-la-Roza
, M. A. Blanco, Ángel Martín Pendás
, Víctor Luaña:
Critic: a new program for the topological analysis of solid-state electron densities. 157-166
Volume 180, Number 2, February 2009
- Zacharoula Kalogiratou, Th. Monovasilis, Tom E. Simos:
Computation of the eigenvalues of the Schrödinger equation by exponentially-fitted Runge-Kutta-Nyström methods. 167-176 - J. G. Jiang, Y. N. Huang:
Simulation of distribution of random walks on a lattice. 177-179 - Nigel Cundy:
Low-lying Wilson Dirac operator eigenvector mixing in dynamical overlap hybrid Monte Carlo. 180-191 - Guang-Hui Cheng, Ting-Zhu Huang
, Shu-Qian Shen:
Block triangular preconditioners for the discretized time-harmonic Maxwell equations in mixed form. 192-196 - Jean-Paul Brichta, Aden N. Seaman, Joseph H. Sanderson:
Ultrafast imaging of polyatomic molecules with simplex algorithm. 197-200 - Nigel Cundy, Stefan Krieg
, Thomas Lippert, Andreas Schäfer:
Topological tunnelling with dynamical overlap fermions. 201-208 - Yong Duan, P. F. Tang, Ting-Zhu Huang
, Sheng-Jian Lai:
Coupling projection domain decomposition method and Kansa's method in electrostatic problems. 209-214 - Attilio Cucchieri
, Axel Maas
, Tereza Mendes
:
Linear covariant gauges on the lattice. 215-225 - D. Portes Jr., Hilario Rodrigues, Basílio Baseia
, Sérgio B. Duarte:
Computational procedure to determine quantum state evolution in Fock space. 226-230 - Byoungseon Jeon, Niels Grønbech-Jensen
:
Efficient parallel algorithm for statistical ion track simulations in crystalline materials. 231-237 - Armen H. Poghosyan, Aram A. Shahinyan:
A new parameter for validation molecular dynamics simulation (MD) data. 238-240 - Veerle Ledoux, Marnix Van Daele, Guido Vanden Berghe:
Efficient computation of high index Sturm-Liouville eigenvalues for problems in physics. 241-250 - Panagiotis Vlachos, Ioannis Karafyllidis:
Simulation of quantum key expansion using quantum cellular automata. 251-255 - Khatuna Kakhiani, Kakha Tsereteli, Paata Tsereteli:
A program to generate a basis set adaptive radial quadrature grid for density functional theory. 256-268 - A. Nappi:
A pitfall in the use of extended likelihood for fitting fractions of pure samples in a mixed sample. 269-275
- M. Souaille, H. Loirat, D. Borgis, Marie-Pierre Gaigeot:
MDVRY: a polarizable classical molecular dynamics package for biomolecules. 276-301 - Dirk Engel, Matthias Klews, Günter Wunner:
A fast parallel code for calculating energies and oscillator strengths of many-electron atoms at neutron star magnetic field strengths in adiabatic approximation. 302-311 - J. S. Lee, M. Carena, J. Ellis, A. Pilaftsis, C. E. M. Wagner:
CPsuperH2.0: An improved computational tool for Higgs phenomenology in the MSSM with explicit CP violation. 312-331 - J. D. Talman:
NumSBT: A subroutine for calculating spherical Bessel transforms numerically. 332-338
Volume 180, Number 3, March 2009
- V. A. Kudryavtsev:
Muon simulation codes MUSIC and MUSUN for underground physics. 339-346 - Christoph Friedrich
, Arno Schindlmayr
, Stefan Blügel
:
Efficient calculation of the Coulomb matrix and its expansion around k=0 within the FLAPW method. 347-359 - Pedro Gonnet
, Jens H. Walther
, Petros Koumoutsakos
:
theta-SHAKE: An extension to SHAKE for the explicit treatment of angular constraints. 360-364 - Takayuki Umeda
, Kentaro Togano, Tatsuki Ogino:
Two-dimensional full-electromagnetic Vlasov code with conservative scheme and its application to magnetic reconnection. 365-374 - Chia-Chien Huang
:
Semiconductor nanodevice simulation by multidomain spectral method with Chebyshev, prolate spheroidal and Laguerre basis functions. 375-383 - Simone Orlandini, Isabella Baccarelli
, Francesco A. Gianturco:
Variational calculations of structures and energetics in very floppy trimers: A new computational implementation. 384-391 - V. A. Dzuba:
An universal algorithm of calculating terms of atomic many-body perturbation theory. 392-400
- Alessandro Ballestrero, Aissa Belhouari, Giuseppe Bevilacqua
, Vladimir Kashkan, Ezio Maina
:
PHANTOM: A Monte Carlo event generator for six parton final states at high energy colliders. 401-417 - J. Brandon Keith, Jacob R. Fennick, Chad E. Junkermeier
, Daniel R. Nelson, James P. Lewis:
A web-deployed interface for performing ab initio molecular dynamics, optimization, and electronic structure in Fireball. 418-426 - Michele Caffo, Henryk Czyz
, Michal Gunia, Ettore Remiddi:
BOKASUN: A fast and precise numerical program to calculate the Master Integrals of the two-loop sunrise diagrams. 427-430 - A. V. Semenov:
LanHEP - a package for the automatic generation of Feynman rules in field theory. Version 3.0. 431-454 - F. Reinhard, Oliver F. Lange, Jochen S. Hub
, Jürgen Haas, Helmut Grubmüller:
g_permute: Permutation-reduced phase space density compaction. 455-458 - Dimitris Skouteris, Osvaldo Gervasi
, Antonio Laganà:
A program for performing exact quantum dynamics calculations using cylindrical polar coordinates: A nanotube application. 459-465 - Zhe Yuan
, Shiwu Gao:
Linear response approach to collective electronic excitations of solids and surfaces. 466-473
- Bruno Juliá-Díaz
, Joseph M. Burdis, Frank Tabakin
:
QDENSITY - A Mathematica quantum computer simulation. 474
Volume 180, Number 4, April 2009
- João Antônio Plascak, A. T. Bernardes:
CCP2008 - Modeling a better world. - Thomas Wüst
, D. P. Landau, Claire Gervais
, Y. Xu:
Monte Carlo simulations of systems with complex energy landscapes. 475-479 - Mário J. de Oliveira
:
Glassy states in the stochastic Potts model. 480-484 - Shan-Ho Tsai, D. P. Landau:
Phase diagram of a two-dimensional large-Q Potts model in an external field. 485-487 - Ernesto S. Loscar, Ezequiel V. Albano:
Hysteretic effects in the first-order irreversible phase transition of the ZGB model. 488-492 - Bertrand Berche
, P. Butera, Wolfhard Janke, Lev N. Shchur:
Universal ratios of critical amplitudes in the Potts model universality class. 493-496 - Marco G. Mazza
, Kevin Stokely, Elena G. Strekalova, Harry Eugene Stanley, Giancarlo Franzese
:
Cluster Monte Carlo and numerical mean field analysis for the water liquid-liquid phase transition. 497-502 - L. Nduwayo, R. Lindebaum, Nithaya Chetty:
Suppressed bond-site percolation. 503-508 - Thomas E. Booth, James E. Gubernatis:
Sewing algorithm. 509-511 - Tuomas Tallinen, Jan A. Åström, Jussi Timonen:
Discrete element simulations of crumpling of thin sheets. 512-516 - Janos M. Kumpula, Jukka-Pekka Onnela, Jari Saramäki, János Kertész, Kimmo Kaski
:
Model of community emergence in weighted social networks. 517-522 - Mary Luz Mouronte, Rosa M. Benito
, Juan Pablo Cárdenas, Antonio Santiago, Vicente Feliú Batlle, P. van Wijngaarden, Luis Gregorio Moyano:
Complexity in Spanish optical fiber and SDH transport networks. 523-526 - Gabriel Baglietto, Ezequiel V. Albano:
Computer simulations of the collective displacement of self-propelled agents. 527-531 - Enrique Burgos, Horacio Ceva, Laura Hernández, R. P. J. Perazzo:
Understanding and characterizing nestedness in mutualistic bipartite networks. 532-535 - Tânia Tomé
, Áttila Leães Rodrigues
, Everaldo Arashiro
, Mário J. de Oliveira
:
The stochastic nature of predator-prey cycles. 536-539 - Marcos Rigol
, Rajiv R. P. Singh:
Thermodynamic properties of quantum lattice models from numerical linked cluster expansions. 540-544 - Przemyslaw Klosiewicz, Jan Broeckhove, Wim Vanroose
:
Using pseudo-arclength continuation to trace the resonances of the Schrödinger equation. 545-548 - Myoung Won Cho, Sul-Ah Ahn:
Efficient and exact computation of Hubbard and t-J models using quantum diagonalization method. 549-554 - Norbert Attig
:
Computational physics with PetaFlops computers. 555-558 - Jamie Shiers:
Grid today, clouds on the horizon. 559-563 - Gastao Krein
, J. M. Machado, A. O. Pereira:
Dynamics of the deconfinement transition of quarks and gluons in a finite volume. 564-573 - R. L. S. Farias, Rudnei O. Ramos
, L. A. da Silva:
Numerical solutions for non-Markovian stochastic equations of motion. 574-579 - Joan Adler, Polina Pine:
Visualization techniques for modelling carbon allotropes. 580-582 - A. G. Cunha-Netto, Ronald Dickman, A. A. Caparica:
Two-dimensional lattice polymers: Adaptive windows simulations. 583-586 - D. T. Seaton, Thomas Wüst
, D. P. Landau:
A Wang-Landau study of the phase transitions in a flexible homopolymer. 587-589 - Cláudio José DaSilva, A. G. Cunha-Netto, Ronald Dickman, A. A. Caparica:
Constructing ground state configurations of lattice polymers. 590-593 - Aimee Gotway Bailey, C. P. Lowe, A. P. Sutton:
REVLD: A coarse-grained model for polymers. 594-599 - Marcus Müller
, C. Pastorino, J. Servantie:
Hydrodynamic boundary condition of polymer melts at simple and complex surfaces. 600-604 - Burkhard Dünweg
, Ulf D. Schiller
, Anthony J. C. Ladd:
Progress in the understanding of the fluctuating lattice Boltzmann equation. 605-608 - Eric J. R. Parteli
, Murilo P. Almeida
, Orencio Durán
, José S. Andrade Jr.
, Hans J. Herrmann:
Sand transport on Mars. 609-611 - Allbens Picardi Faria Atman, P. Claudin, Gaël Combe
:
Departure from elasticity in granular layers: Investigation of a crossover overload force. 612-615 - William F. Oquendo
, José D. Muñoz, A. Lizcano:
Oedometric test, Bauer's law and the micro-macro connection for a dry sand. 616-620 - Reinaldo R. Rosa
, Fernando M. Ramos, Cesar A. Caretta, Haroldo F. de Campos Velho:
Extreme event dynamics in the formation of galaxy-sized dark matter structures. 621-624 - Naoki Yoshida
:
Supercomputer simulations of structure formation in the Universe. 625-627 - Sang Ki Nam, John P. Verboncoeur:
Global model for high power microwave breakdown at high pressure in air. 628-635 - Seung Min Lee, Yong Jun Hong, Young Sik Seo, Felipe Iza, Gyoo Cheon Kim, Jae Koo Lee:
Simulations of biomedical atmospheric-pressure discharges. 636-641 - Tiago Kroetz
, F. A. Marcus, Marisa Roberto, Iberê L. Caldas, Ricardo L. Viana, E. C. da Silva:
Transport control in fusion plasmas by changing electric and magnetic field spatial profiles. 642-650 - Min Sup Hur, Jonathan S. Wurtele
:
Two-dimensional simulations of the amplification and focusing of intense laser pulses in the kinetic regime of Raman backward amplification in plasmas. 651-655 - Y. C. Chuang, J. Y. Hsu:
Particle-in-cell study of microwave confined plasma. 656-658 - J.-Y. Lin, Y.-H. Tang, Min-Hsiung Tsai:
Electronic structures of the Si(001) thin film under (110)- and (010)-direction uniaxial tensile strains. 659-663 - Fortunato Silva de Menezes
, Davi Geiger, Ricardo Martins Abreu e Silva, George Distler, Arefin Hu:
Forward-backward study of the stereo vision problem. 664-668
Volume 180, Number 5, May 2009
- Tao Wei, Shengjing Mu, Aiichiro Nakano, Katherine Shing:
A hybrid multi-loop genetic-algorithm/simplex/spatial-grid method for locating the optimum orientation of an adsorbed protein on a solid surface. 669-674 - Stanislaw Jadach, Wieslaw Placzek
, Maciej Skrzypek, P. Stephens, Zbigniew Was
:
Constrained MC for QCD evolution with rapidity ordering and minimum kT. 675-698 - Shyamal Bhar, Soumen Kumar Roy:
Computer simulation of two continuous spin models using Wang-Landau-Transition-Matrix Monte Carlo algorithm. 699-707 - A. S. V. Ravi Kanth, K. Aruna
:
Differential transform method for solving the linear and nonlinear Klein-Gordon equation. 708-711 - Jacinto Javier Ibáñez
, Vicente Hernández, Enrique Arias
, Pedro A. Ruiz:
Solving Initial Value Problems for Ordinary Differential Equations by two approaches: BDF and piecewise-linearized methods. 712-723
- Sridhar Sahu, Alok Shukla
:
Fortran 90 implementation of the Hartree-Fock approach within the CNDO/2 and INDO models. 724-734 - A. V. Smirnov, M. N. Tentyukov:
Feynman Integral Evaluation by a Sector decomposiTion Approach (FIESTA). 735-746 - Geneviève Bélanger, Fawzi Boudjema
, Alexander Pukhov
, A. Semenov:
Dark matter direct detection rate in a generic model with micrOMEGAs_2.2. 747-767 - Juan-Luis Domenech-Garret, Miguel-Angel Sanchis-Lozano
:
QQ-onia package: a numerical solution to the Schrödinger radial equation for heavy quarkonium. 768-778 - I. P. Lokhtin, L. V. Malinina, S. V. Petrushanko, A. M. Snigirev, I. Arsene, Konrad Tywoniuk
:
Heavy ion event generator HYDJET++ (HYDrodynamics plus JETs). 779-799 - Alberto Otero-de-la-Roza
, Víctor Luaña:
Runwien: a text-based interface for the WIEN package. 800-812
Volume 180, Number 6, June 2009
- Michele Della Morte
, Leonardo Giusti
:
Exploiting symmetries for exponential error reduction in path integral Monte Carlo. 813-818 - Michele Della Morte
, Leonardo Giusti
:
Symmetries and exponential error reduction in Yang-Mills theories on the lattice. 819-826 - Sumie Yamamoto, Keisuke Fujii
, Akiya Miyamoto:
A handy tool for history keeping of Geant4 tracks - J4HistoryKeeper. 827-834 - L. Welser-Sherrill, J. H. Cooley, D. C. Wilson:
Interactive tools designed to study mix in inertial confinement fusion implosions. 835-841 - Zhongcheng Wang, Hezhu Shao
:
A new kind of discretization scheme for solving a two-dimensional time-independent Schrödinger equation. 842-849 - C. Timbó, Luiz Antonio Ribeiro da Rosa, Marcello Gonçalves, S. B. Duarte:
Computational cancer cells identification by fractal dimension analysis. 850-853 - Rong Zeng, Yanzhi Zhang:
Efficiently computing vortex lattices in rapid rotating Bose-Einstein condensates. 854-860 - Diego Molteni, Andrea Colagrossi
:
A simple procedure to improve the pressure evaluation in hydrodynamic context using the SPH. 861-872 - Mehdi Dehghan
, Narges Rastegar:
On the global behavior of a high-order rational difference equation. 873-878 - Charlotte Froese Fischer, Oleg Zatsarinny:
A B-spline Galerkin method for the Dirac equation. 879-886 - M. V. Umansky, X. Q. Xu, Ben Dudson
, L. L. LoDestro, J. R. Myra:
Status and verification of edge plasma turbulence code BOUT. 887-903 - Kui Fu Chen, Jing Tao Jiang, Stephen Crowsen:
Against the long-range spectral leakage of the cosine window family. 904-911 - Adrian Alexandrescu, Alfonso Bueno-Orovio
, José R. Salgueiro, Víctor M. Pérez-García
:
Mapped Chebyshev pseudospectral method for the study of multiple scale phenomena. 912-919 - Janis Timoshenko
, Alexei Kuzmin
:
Wavelet data analysis of EXAFS spectra. 920-925 - Shing-Lin Chang, Cheng-Sheng Chien:
Computing multiple peak solutions for Bose-Einstein condensates in optical lattices. 926-947
- Frank Tabakin
, Bruno Juliá-Díaz
:
QCMPI: A parallel environment for quantum computing. 948-964 - R. Alkofer, Markus Q. Huber
, K. Schwenzer
:
Algorithmic derivation of Dyson-Schwinger equations. 965-976 - Rafael Ramis
, Jürgen Meyer-ter-Vehn, Julio Ramírez:
MULTI2D - a computer code for two-dimensional radiation hydrodynamics. 977-994 - Vladimir Horvat:
ERCS08: A FORTRAN program equipped with a Windows graphics user interface that calculates ECPSSR cross sections for the removal of atomic electrons. 995-1003 - Ling Ti Kong
, Guido Bartels, Carlos Campañá, Colin Denniston
, Martin H. Müser
:
Implementation of Green's function molecular dynamics: An extension to LAMMPS. 1004-1010
- Ochbadrakh Chuluunbaatar
, A. A. Gusev, Vladimir P. Gerdt, V. A. Rostovtsev, Sergey I. Vinitsky
, A. G. Abrashkevich, Michail S. Kaschiev, Vladislav V. Serov
:
Erratum to: Program AEAA_v1_0, "POTHMF: A program for computing potential curves and matrix elements of the coupled adiabatic radial equations for a hydrogen-like atom in a homogeneous magnetic field" [Computer Physics Communications 178 (2008) 301]. 1011