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Publication search results
found 274 matches
- 2016
- Enis Afgan, Dannon Baker, Marius van den Beek
, Daniel J. Blankenberg
, Dave Bouvier
, Martin Cech
, John Chilton
, Dave Clements
, Nate Coraor, Carl Eberhard, Björn A. Grüning
, Aysam Guerler, Jennifer Hillman-Jackson, Gregory Von Kuster, Eric Rasche, Nicola Soranzo
, Nitesh Turaga, James Taylor
, Anton Nekrutenko, Jeremy Goecks:
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update. Nucleic Acids Res. 44(Webserver-Issue): W3-W10 (2016) - Piyush Agrawal
, Sherry Bhalla, Salman Sadullah Usmani
, Sandeep Singh
, Kumardeep Chaudhary
, Gajendra P. S. Raghava
, Ankur Gautam:
CPPsite 2.0: a repository of experimentally validated cell-penetrating peptides. Nucleic Acids Res. 44(Database-Issue): 1098-1103 (2016) - Felipe Albrecht
, Markus List
, Christoph Bock
, Thomas Lengauer
:
DeepBlue epigenomic data server: programmatic data retrieval and analysis of epigenome region sets. Nucleic Acids Res. 44(Webserver-Issue): W581-W586 (2016) - Juan Ignacio Alonso-Barba, Raza-Ur Rahman
, Joachim Wittbrodt
, Juan L. Mateo:
MEPD: medaka expression pattern database, genes and more. Nucleic Acids Res. 44(Database-Issue): 819-821 (2016) - Diego Alonso-López
, Miguel A. Gutiérrez, Katia P. Lopes, Carlos Prieto
, Rodrigo Santamaría
, Javier De Las Rivas
:
APID interactomes: providing proteome-based interactomes with controlled quality for multiple species and derived networks. Nucleic Acids Res. 44(Webserver-Issue): W529-W535 (2016) - Vikram Alva
, Seung-Zin Nam, Johannes Söding
, Andrei N. Lupas:
The MPI bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis. Nucleic Acids Res. 44(Webserver-Issue): W410-W415 (2016) - Omer An
, Giovanni Marco Dall'Olio, Thanos P. Mourikis, Francesca D. Ciccarelli
:
NCG 5.0: updates of a manually curated repository of cancer genes and associated properties from cancer mutational screenings. Nucleic Acids Res. 44(Database-Issue): 992-999 (2016) - Carson M. Andorf, Ethalinda K. S. Cannon
, John L. Portwood II, Jack M. Gardiner, Lisa C. Harper, Mary L. Schaeffer, Bremen L. Braun, Darwin A. Campbell
, Abhinav G. Vinnakota, Venktanaga V. Sribalusu, Miranda Huerta, Kyoung Tak Cho
, Kokulapalan Wimalanathan
, Jacqueline D. Richter, Emily D. Mauch, Bhavani S. Rao, Scott M. Birkett, Taner Z. Sen
, Carolyn J. Lawrence-Dill
:
MaizeGDB update: new tools, data and interface for the maize model organism database. Nucleic Acids Res. 44(Database-Issue): 1195-1201 (2016) - Kiyoko F. Aoki-Kinoshita
, Sanjay Agravat, Nobuyuki P. Aoki
, Sena Arpinar, Richard D. Cummings, Akihiro Fujita, Noriaki Fujita, Gerald M. Hart
, Stuart M. Haslam, Toshisuke Kawasaki, Masaaki Matsubara, Kelley W. Moreman, Shujiro Okuda, Michael Pierce, René Ranzinger, Toshihide Shikanai, Daisuke Shinmachi
, Elena Solovieva
, Yoshinori Suzuki, Shinichiro Tsuchiya, Issaku Yamada
, William S. York, Joseph Zaia
, Hisashi Narimatsu
:
GlyTouCan 1.0 - The international glycan structure repository. Nucleic Acids Res. 44(Database-Issue): 1237-1242 (2016) - Sri Devan Appasamy
, Hazrina Yusof Hamdani, Effirul Ikhwan Ramlan
, Mohd Firdaus Raih
:
InterRNA: a database of base interactions in RNA structures. Nucleic Acids Res. 44(Database-Issue): 266-271 (2016) - David Arndt, Jason R. Grant, Ana Marcu, Tanvir Sajed, Allison Pon, Yongjie Liang, David S. Wishart:
PHASTER: a better, faster version of the PHAST phage search tool. Nucleic Acids Res. 44(Webserver-Issue): W16-W21 (2016) - Haim Ashkenazy
, Shiran Abadi, Eric Martz, Ofer Chay, Itay Mayrose
, Tal Pupko
, Nir Ben-Tal
:
ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules. Nucleic Acids Res. 44(Webserver-Issue): W344-W350 (2016) - Helen Attrill
, Kathleen Falls, Joshua L. Goodman
, Gillian H. Millburn, Giulia Antonazzo, Alix J. Rey, Steven J. Marygold:
FlyBase: establishing a Gene Group resource for Drosophila melanogaster. Nucleic Acids Res. 44(Database-Issue): 786-792 (2016) - Sasha Babicki, David Arndt, Ana Marcu, Yongjie Liang, Jason R. Grant, Adam Maciejewski, David S. Wishart:
Heatmapper: web-enabled heat mapping for all. Nucleic Acids Res. 44(Webserver-Issue): W147-W153 (2016) - Christina Backes, Qurratulain T. Khaleeq, Eckart Meese, Andreas Keller:
miEAA: microRNA enrichment analysis and annotation. Nucleic Acids Res. 44(Webserver-Issue): W110-W116 (2016) - Frederik Otzen Bagger
, Damir Sasivarevic, Sina Hadi Sohi, Linea Gøricke Laursen, Sachin Pundhir
, Casper Kaae Sønderby, Ole Winther
, Nicolas Rapin
, Bo T. Porse
:
BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis. Nucleic Acids Res. 44(Database-Issue): 917-924 (2016) - Erich J. Baker, Jason A. Bubier
, Timothy Reynolds, Michael A. Langston, Elissa J. Chesler:
GeneWeaver: data driven alignment of cross-species genomics in biology and disease. Nucleic Acids Res. 44(Database-Issue): 555-559 (2016) - Jaroslav Bendl
, Jan Stourac
, Eva Sebestova, Ondrej Vavra, Milos Musil, Jan Brezovsky
, Jirí Damborský
:
HotSpot Wizard 2.0: automated design of site-specific mutations and smart libraries in protein engineering. Nucleic Acids Res. 44(Webserver-Issue): W479-W487 (2016) - Gary Benson:
Editorial: Nucleic Acids Research annual Web Server Issue in 2016. Nucleic Acids Res. 44(Webserver-Issue): W1-W2 (2016) - Anindya Bhattacharya, Yan Cui
:
SomamiR 2.0: a database of cancer somatic mutations altering microRNA-ceRNA interactions. Nucleic Acids Res. 44(Database-Issue): 1005-1010 (2016) - Debswapna Bhattacharya, Jackson Nowotny, Renzhi Cao, Jianlin Cheng
:
3Drefine: an interactive web server for efficient protein structure refinement. Nucleic Acids Res. 44(Webserver-Issue): W406-W409 (2016) - Jochen Blom
, Julian Kreis, Sebastian Spänig, Tobias Juhre, Claire Bertelli
, Corinna Ernst
, Alexander Goesmann
:
EDGAR 2.0: an enhanced software platform for comparative gene content analyses. Nucleic Acids Res. 44(Webserver-Issue): W22-W28 (2016) - Frédéric Bouché
, Guillaume Lobet
, Pierre Tocquin
, Claire Périlleux
:
FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana. Nucleic Acids Res. 44(Database-Issue): 1167-1171 (2016) - Costas Bouyioukos
, François Bucchini, Mohamed Elati
, François Képès:
GREAT: a web portal for Genome Regulatory Architecture Tools. Nucleic Acids Res. 44(Webserver-Issue): W77-W82 (2016) - Holger Brandl
, HongKee Moon
, Miquel Vila-Farré
, Shang-Yun Liu, Ian Henry
, Jochen C. Rink:
PlanMine - a mineable resource of planarian biology and biodiversity. Nucleic Acids Res. 44(Database-Issue): 764-773 (2016) - Matija Brozovic, Cyril Martin, Christelle Dantec
, Delphine Dauga
, Mickaël Mendez, Paul Simion
, Madeline Percher, Baptiste Laporte, Céline Scornavacca, Anna Di Gregorio, Shigeki Fujiwara
, Mathieu Gineste, Elijah K. Lowe
, Jacques Piette, Claudia Racioppi
, Filomena Ristoratore, Yasunori Sasakura, Naohito Takatori, C. Titus Brown, Frédéric Delsuc
, Emmanuel J. P. Douzery, Carmela Gissi
, Alex McDougall
, Hiroki Nishida
, Hitoshi Sawada, Billie J. Swalla, Hitoyoshi Yasuo
, Patrick Lemaire
:
ANISEED 2015: a digital framework for the comparative developmental biology of ascidians. Nucleic Acids Res. 44(Database-Issue): 808-818 (2016) - Carol J. Bult, Janan T. Eppig, Judith A. Blake
, James A. Kadin, Joel E. Richardson:
Mouse genome database 2016. Nucleic Acids Res. 44(Database-Issue): 840-847 (2016) - Jonathan Burns, Denys Kukushkin, Kelsi Lindblad, Xiao Chen, Natasa Jonoska, Laura F. Landweber:
<mds_ies_db>: a database of ciliate genome rearrangements. Nucleic Acids Res. 44(Database-Issue): 703-709 (2016) - Sarah E. Calvo
, Karl R. Clauser
, Vamsi K. Mootha:
MitoCarta2.0: an updated inventory of mammalian mitochondrial proteins. Nucleic Acids Res. 44(Database-Issue): 1251-1257 (2016) - Ron Caspi
, Richard Billington, Luciana Ferrer, Hartmut Foerster, Carol A. Fulcher, Ingrid M. Keseler, Anamika Kothari, Markus Krummenacker, Mario Latendresse, Lukas A. Mueller, Quang Ong, Suzanne M. Paley, Pallavi Subhraveti, Daniel S. Weaver, Peter D. Karp:
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res. 44(Database-Issue): 471-480 (2016)
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