• case-insensitive prefix search: default
  e.g., sig matches "SIGIR" as well as "signal"
• exact word search: append dollar sign ($) to word
  e.g., graph$ matches "graph", but not "graphics"
• boolean and: separate words by space
  e.g., codd model
• boolean or: connect words by pipe symbol (|)
  e.g., graph|network

Update May 7, 2017: Please note that we had to disable the phrase search operator (.) and the boolean not operator (-) due to technical problems. For the time being, phrase search queries will yield regular prefix search result, and search terms preceded by a minus will be interpreted as regular (positive) search terms.

found 464 matches

• 2024
• 
  Shayesteh Arasti, Siavash Mirarab:
  Median quartet tree search algorithms using optimal subtree prune and regraft. Algorithms Mol. Biol. 19(1): 12 (2024)
• 
  Leonard Bohnenkämper:
  Recombinations, chains and caps: resolving problems with the DCJ-indel model. Algorithms Mol. Biol. 19(1): 8 (2024)
• 
  Marília D. V. Braga, Leonie R. Brockmann, Katharina Klerx, Jens Stoye:
  Investigating the complexity of the double distance problems. Algorithms Mol. Biol. 19(1): 1 (2024)
• 
  Stefan Canzar, Van Hoan Do, Slobodan Jelic, Sören Laue, Domagoj Matijevic, Tomislav Prusina:
  Metric multidimensional scaling for large single-cell datasets using neural networks. Algorithms Mol. Biol. 19(1): 21 (2024)
• 
  Junyan Dai, Tobias Rubel, Yunheng Han, Erin K. Molloy:
  Dollo-CDP: a polynomial-time algorithm for the clade-constrained large Dollo parsimony problem. Algorithms Mol. Biol. 19(1): 2 (2024)
• 
  Diego Díaz-Domínguez, Miika Leinonen, Leena Salmela:
  Space-efficient computation of k-mer dictionaries for large values of k. Algorithms Mol. Biol. 19(1): 14 (2024)
• 
  Victor Epain, Rumen Andonov:
  Global exact optimisations for chloroplast structural haplotype scaffolding. Algorithms Mol. Biol. 19(1): 5 (2024)
• 
  Jason Fan, Jamshed Khan, Noor Pratap Singh, Giulio Ermanno Pibiri, Rob Patro:
  Fulgor: a fast and compact k-mer index for large-scale matching and color queries. Algorithms Mol. Biol. 19(1): 3 (2024)
• 
  Mahsa Farnia, Nadia Tahiri:
  New generalized metric based on branch length distance to compare B cell lineage trees. Algorithms Mol. Biol. 19(1): 22 (2024)
• 
  Pawel Górecki, Natalia Rutecka, Agnieszka Mykowiecka, Jaroslaw Paszek:
  Unifying duplication episode clustering and gene-species mapping inference. Algorithms Mol. Biol. 19(1): 7 (2024)
• 
  Mateo Gray, Sebastian Will, Hosna Jabbari:
  SparseRNAfolD: optimized sparse RNA pseudoknot-free folding with dangle consideration. Algorithms Mol. Biol. 19(1): 9 (2024)
• 
  Aaron Hong, Marco Oliva, Dominik Köppl, Hideo Bannai, Christina Boucher, Travis Gagie:
  Pfp-fm: an accelerated FM-index. Algorithms Mol. Biol. 19(1): 15 (2024)
• 
  Jamshed Khan, Tobias Rubel, Erin K. Molloy, Laxman Dhulipala, Rob Patro:
  Fast, parallel, and cache-friendly suffix array construction. Algorithms Mol. Biol. 19(1): 16 (2024)
• 
  Zsuzsanna Lipták, Francesco Masillo, Simon J. Puglisi:
  Suffix sorting via matching statistics. Algorithms Mol. Biol. 19(1): 11 (2024)
• 
  Yushu Liu, Mohammad Amin Edrisi, Zhi Yan, Huw A. Ogilvie, Luay Nakhleh:
  NestedBD: Bayesian inference of phylogenetic trees from single-cell copy number profiles under a birth-death model. Algorithms Mol. Biol. 19(1): 18 (2024)
• 
  Yutong Qiu, Yihang Shen, Carl Kingsford:
  Revisiting the complexity of and algorithms for the graph traversal edit distance and its variants. Algorithms Mol. Biol. 19(1): 17 (2024)
• 
  Amatur Rahman, Yoann Dufresne, Paul Medvedev:
  Compression algorithm for colored de Bruijn graphs. Algorithms Mol. Biol. 19(1): 20 (2024)
• 
  Jyotshna Rajput, Ghanshyam Chandra, Chirag Jain:
  Co-linear chaining on pangenome graphs. Algorithms Mol. Biol. 19(1): 4 (2024)
• 
  Nicola Rizzo, Manuel Cáceres, Veli Mäkinen:
  Finding maximal exact matches in graphs. Algorithms Mol. Biol. 19(1): 10 (2024)
• 
  Alitzel López Sánchez, Manuel Lafond:
  Predicting horizontal gene transfers with perfect transfer networks. Algorithms Mol. Biol. 19(1): 6 (2024)
• 
  Tizian Schulz, Paul Medvedev:
  ESKEMAP: exact sketch-based read mapping. Algorithms Mol. Biol. 19(1): 19 (2024)
• 
  Hua-Ting Yao, Bertrand Marchand, Sarah J. Berkemer, Yann Ponty, Sebastian Will:
  Infrared: a declarative tree decomposition-powered framework for bioinformatics. Algorithms Mol. Biol. 19(1): 13 (2024)
• 2023
• 
  Giulia Bernardini, Leo van Iersel, Esther Julien, Leen Stougie:
  Constructing phylogenetic networks via cherry picking and machine learning. Algorithms Mol. Biol. 18(1): 13 (2023)
• 
  Konstantinn Bonnet, Tobias Marschall, Daniel Doerr:
  Constructing founder sets under allelic and non-allelic homologous recombination. Algorithms Mol. Biol. 18(1): 15 (2023)
• 
  Konstantinn Bonnet, Tobias Marschall, Daniel Doerr:
  Correction: Constructing founder sets under allelic and non-allelic homologous recombination. Algorithms Mol. Biol. 18(1): 20 (2023)
• 
  Ke Chen, Mingfu Shao:
  Locality-sensitive bucketing functions for the edit distance. Algorithms Mol. Biol. 18(1): 7 (2023)
• 
  Mohammad Fili, Guiping Hu, Changze Han, Alexa Kort, John Trettin, Hillel Haim:
  A classification algorithm based on dynamic ensemble selection to predict mutational patterns of the envelope protein in HIV-infected patients. Algorithms Mol. Biol. 18(1): 4 (2023)
• 
  Mathieu Gascon, Nadia El-Mabrouk:
  On the complexity of non-binary tree reconciliation with endosymbiotic gene transfer. Algorithms Mol. Biol. 18(1): 9 (2023)
• 
  Veronica Guerrini, Alessio Conte, Roberto Grossi, Gianni Liti, Giovanna Rosone, Lorenzo Tattini:
  phyBWT2: phylogeny reconstruction via eBWT positional clustering. Algorithms Mol. Biol. 18(1): 11 (2023)
• 
  Yunheng Han, Erin K. Molloy:
  Quartets enable statistically consistent estimation of cell lineage trees under an unbiased error and missingness model. Algorithms Mol. Biol. 18(1): 19 (2023)

skipping 434 more matches