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2020 – today
- 2023
[j11]Xiao Zhang
, Xingjie Shi, Yiming Liu, Xu Liu, Shuangge Ma:
A General Framework for Identifying Hierarchical Interactions and Its Application to Genomics Data. J. Comput. Graph. Stat. 32(3): 873-883 (2023)- [c2]Xingjie Shi, Yutong Zhu:
Establishment and Research of a Janus SbBiSi2 Monolayer Structure Model. ICNC-FSKD 2023: 1-5 - 2022
- [j10]Yi Yang, Xingjie Shi, Wei Liu, Qiuzhong Zhou, Mai Chan Lau, Jeffrey Chun Tatt Lim, Lei Sun, Cedric Chuan Young Ng, Joe Yeong, Jin Liu:
SC-MEB: spatial clustering with hidden Markov random field using empirical Bayes. Briefings Bioinform. 23(1) (2022) - [j9]Qing Cheng, Tingting Qiu, Xiaoran Chai, Baoluo Sun, Yingcun Xia, Xingjie Shi, Jin Liu:
MR-Corr2: a two-sample Mendelian randomization method that accounts for correlated horizontal pleiotropy using correlated instrumental variants. Bioinform. 38(2): 303-310 (2022) - 2021
- [j8]Xu Liao, Xiaoran Chai, Xingjie Shi, Lin S. Chen, Jin Liu:
The statistical practice of the GTEx Project: from single to multiple tissues. Quant. Biol. 9(1): 151-167 (2021) - 2020
- [j7]Yi Yang, Xingjie Shi, Yuling Jiao, Jian Huang, Min Chen, Xiang Zhou, Lei Sun, Xinyi Lin, Can Yang, Jin Liu:
CoMM-S2: a collaborative mixed model using summary statistics in transcriptome-wide association studies. Bioinform. 36(7): 2009-2016 (2020)
2010 – 2019
- 2019
- [j6]Xingjie Shi, Yuling Jiao, Yi Yang, Ching-Yu Cheng, Can Yang, Xinyi Lin, Jin Liu:
VIMCO: variational inference for multiple correlated outcomes in genome-wide association studies. Bioinform. 35(19): 3693-3700 (2019) - 2018
- [j5]Xingjie Shi, Yuan Huang, Jian Huang, Shuangge Ma:
A Forward and Backward Stagewise algorithm for nonconvex loss functions with adaptive Lasso. Comput. Stat. Data Anal. 124: 235-251 (2018) - 2015
- [j4]Qing Zhao, Xingjie Shi, Yang Xie, Jian Huang, Ben-Chang Shia, Shuangge Ma:
Combining multidimensional genomic measurements for predicting cancer prognosis: observations from TCGA. Briefings Bioinform. 16(2): 291-303 (2015) - [j3]Xingjie Shi, Huangdi Yi, Shuangge Ma:
Measures for the degree of overlap of gene signatures and applications to TCGA. Briefings Bioinform. 16(5): 735-744 (2015) - [j2]Xingjie Shi, Qing Zhao, Jian Huang, Yang Xie, Shuangge Ma:
Deciphering the associations between gene expression and copy number alteration using a sparse double Laplacian shrinkage approach. Bioinform. 31(24): 3977-3983 (2015) - 2014
- [j1]Xingjie Shi, Shihao Shen, Jin Liu, Jian Huang, Yong Zhou, Shuangge Ma:
Similarity of markers identified from cancer gene expression studies: observations from GEO. Briefings Bioinform. 15(5): 671-684 (2014)
2000 – 2009
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