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Journal Articles
- 2023
[j18]Mandy Ibéné, Audrey Legendre, Guillaume Postic
, Eric Angel, Fariza Tahi:
C-RCPred: a multi-objective algorithm for interactive secondary structure prediction of RNA complexes integrating user knowledge and SHAPE data. Briefings Bioinform. 24(4) (2023)- [j17]Guillaume Postic, Christophe Tav, Ludovic Platon, Farida Zehraoui, Fariza Tahi:
IRSOM2: a web server for predicting bifunctional RNAs. Nucleic Acids Res. 51(W1): 281-288 (2023) - 2021
- [j16]Louis Becquey, Eric Angel, Fariza Tahi:
RNANet: an automatically built dual-source dataset integrating homologous sequences and RNA structures. Bioinform. 37(9): 1218-1224 (2021) - [j15]Rabah Lebsir, Abdesslem Layeb, Fariza Tahi:
A Greedy Clustering Algorithm for Multiple Sequence Alignment. Int. J. Cogn. Informatics Nat. Intell. 15(4): 1-17 (2021) - 2020
- [j14]Louis Becquey, Eric Angel, Fariza Tahi:
BiORSEO: a bi-objective method to predict RNA secondary structures with pseudoknots using RNA 3D modules. Bioinform. 36(8): 2451-2457 (2020) - 2019
- [j13]Audrey Legendre, Eric Angel, Fariza Tahi:
RCPred: RNA complex prediction as a constrained maximum weight clique problem. BMC Bioinform. 20-S(3): 53-62 (2019) - 2018
- [j12]Ludovic Platon, Farida Zehraoui, Abdelhafid Bendahmane, Fariza Tahi:
IRSOM, a reliable identifier of ncRNAs based on supervised self-organizing maps with rejection. Bioinform. 34(17): i620-i628 (2018) - [j11]Audrey Legendre, Eric Angel, Fariza Tahi:
Bi-objective integer programming for RNA secondary structure prediction with pseudoknots. BMC Bioinform. 19(1): 13:1-13:15 (2018) - 2016
- [j10]Christophe Tav, Sébastien Tempel, Laurent Poligny, Fariza Tahi:
miRNAFold: a web server for fast miRNA precursor prediction in genomes. Nucleic Acids Res. 44(Webserver-Issue): W181-W184 (2016) - 2014
- [j9]Jocelyn Brayet, Farida Zehraoui, Laurence Jeanson-Leh, David Israeli, Fariza Tahi:
Towards a piRNA prediction using multiple kernel fusion and support vector machine. Bioinform. 30(17): 364-370 (2014) - 2012
- [j8]Sébastien Tempel, Nicolas Pollet, Fariza Tahi:
ncRNAclassifier: a tool for detection and classification of transposable element sequences in RNA hairpins. BMC Bioinform. 13: 246 (2012) - 2010
- [j7]Sébastien Tempel, Christine Rousseau, Fariza Tahi, Jacques Nicolas:
ModuleOrganizer: detecting modules in families of transposable elements. BMC Bioinform. 11: 474 (2010) - 2009
- [j6]Gilles Bernot, Fariza Tahi:
Behaviour Preservation of a Biological Regulatory Network when Embedded into a Larger Network. Fundam. Informaticae 91(3-4): 463-485 (2009) - 2007
- [j5]Stefan Engelen, Fariza Tahi:
Predicting RNA secondary structure by the comparative approach: how to select the homologous sequences. BMC Bioinform. 8 (2007) - [j4]Sylvie Troncale, Fariza Tahi, David Campard, Jean-Pierre Vannier:
Modélisation et simulation de la rAgulation de l'hématopopièse précoce grâce aux réseaux de Petri hybrides fonctionnels. Tech. Sci. Informatiques 26(1-2): 99-122 (2007) - 2005
- [j3]Fariza Tahi, Stefan Engelen, Mireille Régnier:
P-dcfold or How to Predict all Kinds of Pseudoknots in Rna Secondary Structures. Int. J. Artif. Intell. Tools 14(5): 703-716 (2005) - 2002
- [j2]Fariza Tahi, Manolo Gouy, Mireille Régnier:
Automatic RNA Secondary Structure Prediction with a Comparative Approach. Comput. Chem. 26(5): 521-530 (2002) - 1994
- [j1]Stéphane Grumbach, Fariza Tahi:
A New Challenge for Compression Algorithms: Genetic Sequences. Inf. Process. Manag. 30(6): 875-886 (1994)
Conference and Workshop Papers
- 2023
- [c10]Loïc Omnes, Eric Angel, Pierre Bartet, François Radvanyi, Fariza Tahi:
Prediction of Secondary Structure for Long Non-Coding RNAs using a Recursive Cutting Method based on Deep Learning. BIBE 2023: 14-21 - 2018
- [c9]Ludovic Platon, Farida Zehraoui, Fariza Tahi:
Localized Multiple Sources Self-Organizing Map. ICONIP (3) 2018: 648-659 - 2017
- [c8]Ludovic Platon, Farida Zehraoui, Fariza Tahi:
Self-organizing maps with supervised layer. WSOM 2017: 161-168 - 2008
- [c7]Amel Bouzeghoub, Abdeltif Elbyed, Fariza Tahi:
OMIE: Ontology Mapping within an Interactive and Extensible Environment. DILS 2008: 161-168 - 2006
- [c6]S. Randall Thomas, Fariza Tahi, Peter Harris, Andrew Lonie:
The Renal Physiome Project. ISBI 2006: 820-823 - [c5]Sylvie Troncale, Fariza Tahi, David Campard, Jean-Pierre Vannier, Janine Guespin:
Modeling and Simulation with Hybrid Functional Petri Nets of the Role of Interleukin-6 in Human Early Haematopoiesis. Pacific Symposium on Biocomputing 2006: 427-438 - 2004
- [c4]Christine Collet, Khalid Belhajjame, Gilles Bernot, Christophe Bobineau, Gennaro Bruno, Béatrice Finance, Fabrice Jouanot, Zoubida Kedad, David Laurent, Fariza Tahi, Genoveva Vargas-Solar, Tuyet-Trinh Vu, Xiaohui Xue:
Towards a Mediation System Framework for Transparent Access to Largely Distributed Sources. The MediaGrid Project. ICSNW 2004: 65-78 - [c3]Stefan Engelen, Fariza Tahi:
An Open Problem in RNA Secondary Structure Prediction by the Comparative Approach. METMBS 2004: 293-299 - 2003
- [c2]Fariza Tahi, Stefan Engelen, Mireille Régnier:
A Fast Algorithm for NA Secondary Structure Prediction Including Pseudoknots. BIBE 2003: 11-17 - 1993
- [c1]Stéphane Grumbach, Fariza Tahi:
Compression of DNA Sequences. Data Compression Conference 1993: 340-350
Coauthor Index
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