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ORCID3rd BIBE 2003: Bethesda, Maryland, USA
- 3rd IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2003), 10-12 March 2003, Bethesda, MD, USA. IEEE Computer Society 2003, ISBN 0-7695-1907-5
Bioinfo-1: Protein Structures and Pathways
- Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyle Ellrott
, Li Wang, Inna Vokler, Philip F. LoCascio, Dong Xu, Ying Xu:
A Computational Pipeline for Protein Structure Prediction and Analysis at Genome Scale. 3-10 - Fariza Tahi, Stefan Engelen, Mireille Régnier:
A Fast Algorithm for NA Secondary Structure Prediction Including Pseudoknots. 11-17 - Yu Chen, Trupti Joshi, Ying Xu, Dong Xu:
Towards Automated Derivation of Biological Pathways Using High-Throughput Biological Data. 18-25 - Ying Zhao, George Karypis:
Prediction of Contact Maps Using Support Vector Machines. 26-
Bioeng-1: Biomedical Data Engineering
- Peter Clote:
Performance Comparison of Generalized PSSM in Signal Peptide Cleavage Site. 37-44 - Richard Eibrand, Paul E. Kennedy, Deirdre Cotter, Ursula MacEvilly, Bing Wu:
Analysis of Atlantic Salmon Skin Mucus: COPS - A Computer-Based System for Protein Pattern Analysis of 1D SDS-PAGE Gels. 45-52 - Xin Huang, Shu-Ching Chen, Mei-Ling Shyu:
An Open Multiple Instance Learning Framework and Its Application in Drug Activity Prediction Problems. 53-59 - Jeffrey D. Johnson, Dietmar Plenz, J. Beggs, Wei Li, M. Mieier, N. Miltner, K. Owe:
Analysis of Spontaneous Activity in Cultured Brain Tissue Using the Discrete Wavelet Transfor. 60-
Bioinfo-2: Phylogenetic Trees
- Mathieu Blanchette, Samson Kwong, Martin Tompa:
An Empirical Comparison of Tools for Phylogenetic Footprinting. 69-78 - Tiffani L. Williams, Bernard M. E. Moret:
An Investigation of Phylogenetic Likelihood Methods. 79-86 - John Bluis, Dong-Guk Shin:
Nodal Distance Algorithm: Calculating a Phylogenetic Tree Comparison Metri. 87-94 - Michael Hu, Paul E. Kearney, Jonathan H. Badger:
A Collapsing Method for the Efficient Recovery of Optimal Edges in Phylogenetic Trees. 95-
Bioeng-2: Medical Image Processing I
- Francis K. H. Quek, Vishwas Kulkarni, Cemil Kirbas:
Comparison of Bicubic and Bézier Polynomials for Surface Parameterization in Volumetric Image. 107-114 - Fan Shao, Keck Voon Ling, Wan Sing Ng:
Evolving Bubbles for Prostate Surface Detection from TRUS Images. 115-121 - Dawei Gui, Nikolaos V. Tsekos:
Structure-Targeting Fast Magnetic Resonance Imaging Angiography with Partial Collection of the Inverse Space (k-Space) Bbased on the Orientation of the Vessel in Real Spac. 122-125 - Joel R. Garbow, Joseph P. Dugas, Mark S. Conradi:
Respiratory Gating for MRI and MRS in Rodents. 126-
Bioinfo-3: Bio-Databases I
- William M. Shui, Nicole Lam, Raymond K. Wong:
A Novel Laboratory ersion Management System for Tracking Complex Biological Experiments. 133-140 - Luay Nakhleh, Daniel P. Miranker, François Barbançon, William H. Piel, Michael J. Donoghue:
Requirements of Phylogenetic Databases. 141-148 - S. Alireza Aghili, Divyakant Agrawal, Amr El Abbadi:
Filtration of String Proximity Search via Transformation. 149-157 - Cynthia Gibas, David Sturgill, Jennifer W. Weller:
GenoMosaic: On-Demand Multiple Genome Comparison and Comparative Annotatio. 158-
Bioeng-3: Biomedical Imaging, Signaling, and Computation
- Jie Zhou:
Automatic Detection of Premature Ventricular Contraction Using Quantum Neural Networks. 169-173 - Cemil Kirbas, Francis K. H. Quek:
Vessel Extraction in Medical Images by 3D Wave Propagation and Traceback. 174-181 - Nawaz Khan, Shahedur Rahman:
A New Approach to Detect Similar Proteins from 2D Gel. 182-189 - Blake T. Larson, Nikolaos V. Tsekos, Arthur G. Erdman:
A Robotic Device for Minimally Invasive Breast Interventions with Real-Time MRI Guidance. 190-
Bioinfo-4: Sequences and Searching
- Fang-Xiang Wu, Wen-Jun Zhang, Anthony J. Kusalik:
An Algorithm to Reconstruct a Target DNA Sequence from Its Spectrum Connected at a Given Level. 201-205 - Kenneth D. Jarman, William R. Cannon, Kristin H. Jarman, Alejandro Heredia-Langner:
A Model of Random Sequences for de novo Peptide Sequencing. 206-213 - Saurabh Sinha, Martin Tompa:
Performance Comparison of Algorithms for FindingTranscription Factor Binding Sites. 214-
Bioeng-4: Medical Image Processing II
- Vincent T. Y. Ng, Tim K. Lee, Benny Y. M. Fung:
Determining the Asymmetries of Skin Lesions with Fuzzy Borders. 223-230 - Tarek A. El Doker:
Unsupervised Iterative Segmentation and Recognition of Anatomic Structures in Medical Imagery Using Second-Order B-Spline Descriptors and Geometric Quasi-Invariants. 231-237 - Cemil Kirbas, Francis K. H. Quek:
Vessel Extractio Techniques and Algorithms: A Surve. 238-245 - Frederic Rick McKenzie, Rania Hussein, Jennifer Seevinck, Paul Schellhammer, Jose Diaz:
Prostate Gland and Extra-Capsular Tissue 3D Reconstruction and Measurement. 246-
Bioinfo-5: Bio-Databases II
- Hiroshi Mamitsuka:
Empirical Evaluation of Ensemble Feature Subset Selection Methods for Learning from a High-Dimensional Database in Drug Desig. 253-257 - Zhijie Guan, Hasan M. Jamil:
Streamlining Biological Data Analysis Using BioFlow. 258-262 - Ling Liu, David Buttler, Terence Critchlow, Wei Han, Henrique Paques, Calton Pu, Daniel Rocco:
BioSeek: Exploiting Source-Capability Information for Integrated Access to Multiple Bioinformatics Data Sources. 263-
Bioeng-5: Biological Systems and Models
- Wei Li, Jeffrey D. Johnson:
A Computational Model of the Role of Deficit-Related Drives in Sequential Movement Learning in a T-Maze Environment. 275 - Kevin M. Biddell, Jinghong Li, Jeffrey D. Johnson:
A Biological Mapping of a Learned Avoidance Behavior Model to the Basal Ganglia. 276-280 - Hiroshia Tamagawa, Fumio Nogata, Toyotaka Watanabe, Akinori Abe, Suzana Popovic:
Influence of the Thermal Treatment Applied to PAN Gel on Its Length Change and Genrated Force. 281-
Panel
- Nikolaos G. Bourbakis:
Bioinformatics and Biotechnology Research Issues. 285-
Bioinfo-6: Gene Expressions
- Ning Wei, Le Gruenwald, Tyrrell Conway:
Analyzing the Escherichia coli Gene Expression Data by a Multilayer Adjusted Tree Organizing Map. 289-288 - Hsien-Da Huang, Huei-Lin Chang, Tsung-Shan Tsou, Baw-Jhiune Liu, Cheng-Yan Kao, Jorng-Tzong Horng:
A Data Mining Method to Predict Transcriptional Regulatory Sites Based on Differentially Expressed Genes in Human Genome. 297-304 - Chen-Hsiang Yeang, Tommi S. Jaakkola:
Time Series Analysis of Gene Expression and Location Data. 305-312 - Yunlong Liu, Hui Bin Sun, Hiroki Yokota:
Regulating Gene Expression Using Optimal Control Theory. 313-
Bioinfo-7: Clustering Algorithms and Molecular Structures
- Jiong Yang, Haixun Wang, Wei Wang, Philip S. Yu:
Enhanced Biclustering on Expression Data. 321-327 - Feng Luo, Kun Tang, Latifur Khan:
Hierarchical Clustering of Gene Expression Data. 328-335 - Matt Coatney, Srinivasan Parthasarathy:
MotifMiner: A General Toolkit for Efficiently Identifying Common Substructures in Molecules. 336-340 - Chern-Hooi Chionh, Zhiyong Huang, Kian-Lee Tan, Zhen Yao:
Augmenting SSEs with Structural Properties for Rapid Protein Structure Comparison. 341-
Bioinfo-8: Bio-Databases III
- Zina Ben-Miled, S. Li, Jesse Martin, Chavali Balagopalakrishna, Omran A. Bukhres, Robert J. Oppelt:
Load Balancing: A Case Study of a Pharmaceutical Drug Candidate Database. 351-358 - Ozgur Ozturk, Hakan Ferhatosmanoglu:
Effective Indexing and Filtering for Similarity Search in Large Biosequence Databases. 359-366 - William M. Shui, Raymond K. Wong:
Application of XML Schema and Active Rules System in Management and Integration of Heterogeneous Biological Data. 367-374 - Rui Mao, Weijia Xu, Neha Singh, Daniel P. Miranker:
An Assessment of a Metric Space Database Index to Support Sequence Homology. 375-
Bioinfo-9: Clustering Algorithms
- Hiroshi Mamitsuka:
Detecting Experimental Noises in Protein-Protein Interactions with Iterative Sampling and Model-Based Clustering. 385-392 - Daxin Jiang, Jian Pei, Aidong Zhang:
DHC: A Density-Based Hierarchical Clustering Method for Time Series Gene Expression Dat. 393-400 - Fang-Xiang Wu, Wen-Jun Zhang, Anthony J. Kusalik:
Determination of the Minimum Sample Size in Microarray Experiments to Cluster Genes Using K-means Clustering. 401-406 - Chyun-Shin Cheng, Shiuan-Sz Wang:
A Repulsive Clustering Algorithm for Gene Expression Data. 407-
Bioinfo-10: Prediction, Simulation and Mining Models
- Katia S. Guimarães, Jeane C. B. Melo, George D. C. Cavalcanti:
Combining Few Neural Networks for Effective Secondary Structure Prediction. 415-420 - Gabriel Querrec, Vincent Rodin, Jean François Abgrall, Sébastien Kerdélo, Jacques Tisseau:
Uses of Multiagents Systems for Simulation of MAPK Pathway. 421-425 - Jeffrey J. P. Tsai, Jan-Gowth Chang, S. H. Shih, Rong-Ming Chen, Han-Wen Hsiao, Rouh-Mei Hu, S. N. Chen, M. M. Lee, Falcon F. M. Liu, Wen-Ling Chan:
A Framework for Cancer-Related Genes Mining over the Internet. 426-435 - Doosung Hwang, Farshad Fotouhi, Russell L. Finley Jr., William I. Grosky:
Predictive Model for Yeast Protein Functions Using Modular Neural Approach. 436-
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