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ORCIDThomas T. Liu
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- affiliation: University of California San Diego, CA, USA
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Journal Articles
- 2022
[j50]Thomas T. Liu
, Bochao Li, Brice Fernandez, Suchandrima Banerjee:
A geometric view of signal sensitivity metrics in multi-echo fMRI. NeuroImage 259: 119409 (2022)- 2020
- [j49]Lisa E. Mash, Brandon Keehn, Annika C. Linke, Thomas T. Liu, Jonathan L. Helm, Frank Haist, Jeanne Townsend, Ralph-Axel Müller:
Atypical Relationships Between Spontaneous EEG and fMRI Activity in Autism. Brain Connect. 10(1): 18-28 (2020) - 2019
- [j48]Alican Nalci, Bhaskar D. Rao, Thomas T. Liu:
Nuisance effects and the limitations of nuisance regression in dynamic functional connectivity fMRI. NeuroImage 184: 1005-1031 (2019) - [j47]Chelsea C. Hays, Zvinka Z. Zlatar, M. J. Meloy, Mark W. Bondi, Paul E. Gilbert, Thomas T. Liu, Jonathan L. Helm, Christina E. Wierenga:
APOE modifies the interaction of entorhinal cerebral blood flow and cortical thickness on memory function in cognitively normal older adults. NeuroImage 202 (2019) - [j46]Alican Nalci, Wenjing Luo, Thomas T. Liu:
Nuisance effects in inter-scan functional connectivity estimates before and after nuisance regression. NeuroImage 202 (2019) - 2018
- [j45]Maryam Falahpour, Alican Nalci, Thomas T. Liu:
The Effects of Global Signal Regression on Estimates of Resting-State Blood Oxygen-Level-Dependent Functional Magnetic Resonance Imaging and Electroencephalogram Vigilance Correlations. Brain Connect. 8(10): 618-627 (2018) - [j44]Maryam Falahpour, Catie Chang, Chi Wah Wong, Thomas T. Liu:
Template-based prediction of vigilance fluctuations in resting-state fMRI. NeuroImage 174: 317-327 (2018) - [j43]Alican Nalci, Igor Fedorov, Maher Al-Shoukairi, Thomas T. Liu, Bhaskar D. Rao:
Rectified Gaussian Scale Mixtures and the Sparse Non-Negative Least Squares Problem. IEEE Trans. Signal Process. 66(12): 3124-3139 (2018) - 2017
- [j42]Thomas T. Liu, Alican Nalci, Maryam Falahpour:
The global signal in fMRI: Nuisance or Information? NeuroImage 150: 213-229 (2017) - [j41]Alican Nalci, Bhaskar D. Rao, Thomas T. Liu:
Global signal regression acts as a temporal downweighting process in resting-state fMRI. NeuroImage 152: 602-618 (2017) - [j40]Thomas T. Liu:
Reprint of 'Noise contributions to the fMRI signal: An Overview'. NeuroImage 154: 4-14 (2017) - 2016
- [j39]Maryam Falahpour, Wesley K. Thompson, Angela E. Abbott, Afrooz Jahedi, Mark E. Mulvey, Michael Datko, Thomas T. Liu, Ralph-Axel Müller:
Underconnected, But Not Broken? Dynamic Functional Connectivity MRI Shows Underconnectivity in Autism Is Linked to Increased Intra-Individual Variability Across Time. Brain Connect. 6(5): 403-414 (2016) - [j38]Chi Wah Wong, Pamela N. DeYoung, Thomas T. Liu:
Differences in the resting-state fMRI global signal amplitude between the eyes open and eyes closed states are related to changes in EEG vigilance. NeuroImage 124: 24-31 (2016) - [j37]David B. Keator, Theo G. M. van Erp, Jessica A. Turner, Gary H. Glover, Bryon A. Mueller, Thomas T. Liu, James T. Voyvodic, Jerod Rasmussen, Vince D. Calhoun, Hyo Jong Lee, Arthur W. Toga, Sarah C. McEwen, Judith M. Ford, Daniel H. Mathalon, Michele T. Diaz, Daniel S. O'Leary, Henry Jeremy Bockholt, Syam Gadde, Adrian Preda, Cynthia G. Wible, Hal S. Stern, Aysenil Belger, Gregory McCarthy, I. Burak Özyurt, Steven G. Potkin, The FBIRN Consortium:
The Function Biomedical Informatics Research Network Data Repository. NeuroImage 124: 1074-1079 (2016) - [j36]David Shin, Ibrahim Burak Özyurt, Greg G. Brown, Christine Fennema-Notestine, Thomas T. Liu:
The Cerebral Blood Flow Biomedical Informatics Research Network (CBFBIRN) data repository. NeuroImage 124: 1202-1207 (2016) - [j35]Thomas T. Liu:
Noise contributions to the fMRI signal: An overview. NeuroImage 143: 141-151 (2016) - 2015
- [j34]Valur T. Olafsson, Prantik Kundu, Eric C. Wong, Peter A. Bandettini, Thomas T. Liu:
Enhanced identification of BOLD-like components with multi-echo simultaneous multi-slice (MESMS) fMRI and multi-echo ICA. NeuroImage 112: 43-51 (2015) - 2014
- [j33]Mingxiong Huang, Charles W. Huang, Ashley Robb, Annemarie Angeles, Sharon L. Nichols, Dewleen G. Baker, Tao Song, Deborah L. Harrington, Rebecca J. Theilmann, Ramesh Srinivasan, David Heister, Mithun Diwakar, José M. Cañive, J. Christopher Edgar, Yu-Han Chen, Zhengwei Ji, Max Shen, Fady El-Gabalawy, Michael L. Levy, Robert N. McLay, Jennifer Webb-Murphy, Thomas T. Liu, Angela Drake, Roland R. Lee:
MEG source imaging method using fast L1 minimum-norm and its applications to signals with brain noise and human resting-state source amplitude images. NeuroImage 84: 585-604 (2014) - 2013
- [j32]David Shin, I. Burak Özyurt, Thomas T. Liu:
The Cerebral Blood Flow Biomedical Informatics Research Network (CBFBIRN) database and analysis pipeline for arterial spin labeling MRI data. Frontiers Neuroinformatics 7: 21 (2013) - [j31]Thomas T. Liu:
Neurovascular factors in resting-state functional MRI. NeuroImage 80: 339-348 (2013) - [j30]Chi Wah Wong, Valur T. Olafsson, Omer Tal, Thomas T. Liu:
The amplitude of the resting-state fMRI global signal is related to EEG vigilance measures. NeuroImage 83: 983-990 (2013) - 2012
- [j29]Stephen M. Smith, Peter A. Bandettini, Karla L. Miller, T. E. J. Behrens, Karl J. Friston, Olivier David, Thomas T. Liu, Mark William Woolrich, Thomas E. Nichols:
The danger of systematic bias in group-level FMRI-lag-based causality estimation. NeuroImage 59(2): 1228-1229 (2012) - [j28]Hongjian He, Thomas T. Liu:
A geometric view of global signal confounds in resting-state functional MRI. NeuroImage 59(3): 2339-2348 (2012) - [j27]Anna Leigh Rack-Gomer, Thomas T. Liu:
Caffeine increases the temporal variability of resting-state BOLD connectivity in the motor cortex. NeuroImage 59(3): 2994-3002 (2012) - [j26]Mingxiong Huang, Sharon L. Nichols, Ashley Robb, Annemarie Angeles, Angela Drake, Martin Holland, Sarah Asmussen, John D'Andrea, Won Chun, Michael L. Levy, Li Cui, Tao Song, Dewleen G. Baker, Paul Hammer, Robert N. McLay, Rebecca J. Theilmann, Raul Coimbra, Mithun Diwakar, Cynthia Boyd, John Neff, Thomas T. Liu, Jennifer Webb-Murphy, Roxanna Farinpour, Catherine Cheung, Deborah L. Harrington, David Heister, Roland R. Lee:
An automatic MEG low-frequency source imaging approach for detecting injuries in mild and moderate TBI patients with blast and non-blast causes. NeuroImage 61(4): 1067-1082 (2012) - [j25]Thomas T. Liu:
The development of event-related fMRI designs. NeuroImage 62(2): 1157-1162 (2012) - [j24]Chi Wah Wong, Valur T. Olafsson, Omer Tal, Thomas T. Liu:
Anti-correlated networks, global signal regression, and the effects of caffeine in resting-state functional MRI. NeuroImage 63(1): 356-364 (2012) - 2011
- [j23]Mithun Diwakar, Omer Tal, Thomas T. Liu, Deborah L. Harrington, Ramesh Srinivasan, Laura Muzzatti, Tao Song, Rebecca J. Theilmann, Roland R. Lee, Mingxiong Huang:
Accurate reconstruction of temporal correlation for neuronal sources using the enhanced dual-core MEG beamformer. NeuroImage 56(4): 1918-1928 (2011) - 2010
- [j22]Thomas T. Liu, Joy Liau:
Caffeine increases the linearity of the visual BOLD response. NeuroImage 49(3): 2311-2317 (2010) - [j21]Kathleen P. Brumm, Joanna E. Perthen, Thomas T. Liu, Frank Haist, Liat Ayalon, Tracy Love:
An arterial spin labeling investigation of cerebral blood flow deficits in chronic stroke survivors. NeuroImage 51(3): 995-1005 (2010) - 2009
- [j20]Joy Liau, Thomas T. Liu:
Inter-subject variability in hypercapnic normalization of the BOLD fMRI response. NeuroImage 45(2): 420-430 (2009) - [j19]Anna Leigh Rack-Gomer, Joy Liau, Thomas T. Liu:
Caffeine reduces resting-state BOLD functional connectivity in the motor cortex. NeuroImage 46(1): 56-63 (2009) - 2008
- [j18]Joanna E. Perthen, Amy E. Lansing, Joy Liau, Thomas T. Liu, Richard B. Buxton:
Caffeine-induced uncoupling of cerebral blood flow and oxygen metabolism: A calibrated BOLD fMRI study. NeuroImage 40(1): 237-247 (2008) - [j17]Khaled Restom, Joanna E. Perthen, Thomas T. Liu:
Calibrated fMRI in the medial temporal lobe during a memory-encoding task. NeuroImage 40(4): 1495-1502 (2008) - [j16]Joy Liau, Joanna E. Perthen, Thomas T. Liu:
Caffeine reduces the activation extent and contrast-to-noise ratio of the functional cerebral blood flow response but not the BOLD response. NeuroImage 42(1): 296-305 (2008) - 2007
- [j15]Yashar Behzadi, Khaled Restom, Joy Liau, Thomas T. Liu:
A component based noise correction method (CompCor) for BOLD and perfusion based fMRI. NeuroImage 37(1): 90-101 (2007) - [j14]Khaled Restom, Katherine J. Bangen, Mark W. Bondi, Joanna E. Perthen, Thomas T. Liu:
Cerebral blood flow and BOLD responses to a memory encoding task: A comparison between healthy young and elderly adults. NeuroImage 37(2): 430-439 (2007) - 2006
- [j13]Khaled Restom, Yashar Behzadi, Thomas T. Liu:
Physiological noise reduction for arterial spin labeling functional MRI. NeuroImage 31(3): 1104-1115 (2006) - [j12]Yashar Behzadi, Thomas T. Liu:
Caffeine reduces the initial dip in the visual BOLD response at 3 T. NeuroImage 32(1): 9-15 (2006) - 2005
- [j11]Thomas T. Liu, Eric C. Wong:
A signal processing model for arterial spin labeling functional MRI. NeuroImage 24(1): 207-215 (2005) - [j10]Yashar Behzadi, Thomas T. Liu:
An arteriolar compliance model of the cerebral blood flow response to neural stimulus. NeuroImage 25(4): 1100-1111 (2005) - 2004
- [j9]Takayuki Obata, Thomas T. Liu, Karla L. Miller, Wen-Ming Luh, Eric C. Wong, Lawrence R. Frank, Richard B. Buxton:
Discrepancies between BOLD and flow dynamics in primary and supplementary motor areas: application of the balloon model to the interpretation of BOLD transients. NeuroImage 21(1): 144-153 (2004) - [j8]Thomas T. Liu, Lawrence R. Frank:
Efficiency, power, and entropy in event-related FMRI with multiple trial types: Part I: theory. NeuroImage 21(1): 387-400 (2004) - [j7]Thomas T. Liu:
Efficiency, power, and entropy in event-related fMRI with multiple trial types: Part II: design of experiments. NeuroImage 21(1): 401-413 (2004) - [j6]Martin P. Paulus, Justin S. Feinstein, Susan F. Tapert, Thomas T. Liu:
Trend detection via temporal difference model predicts inferior prefrontal cortex activation during acquisition of advantageous action selection. NeuroImage 21(2): 733-743 (2004) - [j5]Thomas T. Liu, Lawrence R. Frank:
Erratum to "Efficiency, power, and entropy in event-related FMRI with multiple trial types: Part I: theory" [NeuroImage 21 (2004) 387-400]. NeuroImage 22(3): 1427 (2004) - [j4]Kâmil Uludag, David J. Dubowitz, Elizabeth J. Yoder, Khaled Restom, Thomas T. Liu, Richard B. Buxton:
Coupling of cerebral blood flow and oxygen consumption during physiological activation and deactivation measured with fMRI. NeuroImage 23(1): 148-155 (2004) - [j3]Thomas T. Liu, Yashar Behzadi, Khaled Restom, Kâmil Uludag, Kun Lu, Giedrius T. Buracas, David J. Dubowitz, Richard B. Buxton:
Caffeine alters the temporal dynamics of the visual BOLD response. NeuroImage 23(4): 1402-1413 (2004) - 2002
- [j2]Thomas T. Liu, Eric C. Wong, Lawrence R. Frank, Richard B. Buxton:
Analysis and Design of Perfusion-Based Event-Related fMRI Experiments. NeuroImage 16(1): 269-282 (2002) - 2000
- [j1]Thomas T. Liu, Antony C. Fraser-Smith:
Detection of transients in 1/f noise with the undecimated discrete wavelet transform. IEEE Trans. Signal Process. 48(5): 1458-1462 (2000)
Conference and Workshop Papers
- 1999
- [c1]Thomas T. Liu, Antony C. Fraser-Smith:
An undecimated wavelet transform based detector for transients in 1/f noise. ICASSP 1999: 1185-1188
Coauthor Index
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