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ORCIDMaureen A. Sartor
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Journal Articles
- 2024
[j20]Kai Wang
, Bambarendage P. U. Perera, Rachel K. Morgan, Kimberley Sala-Hamrick, Viviana Geron, Laurie K. Svoboda, Christopher Faulk, Dana C. Dolinoy, Maureen A. Sartor:
piOxi database: a web resource of germline and somatic tissue piRNAs identified by chemical oxidation. Database J. Biol. Databases Curation 2024 (2024)- 2021
- [j19]Maryam Bagherian, Elyas Sabeti, Kai Wang, Maureen A. Sartor, Zaneta Nikolovska-Coleska, Kayvan Najarian:
Machine learning approaches and databases for prediction of drug-target interaction: a survey paper. Briefings Bioinform. 22(1): 247-269 (2021) - [j18]Maryam Bagherian, Elyas Sabeti, Kai Wang, Maureen A. Sartor, Zaneta Nikolovska-Coleska, Kayvan Najarian:
Erratum to: Machine learning approaches and databases for prediction of drug-target interaction: a survey paper. Briefings Bioinform. 22(1): 606 (2021) - [j17]Maryam Bagherian, Renaid B. Kim, Cheng Jiang, Maureen A. Sartor, Harm Derksen, Kayvan Najarian:
Coupled matrix-matrix and coupled tensor-matrix completion methods for predicting drug-target interactions. Briefings Bioinform. 22(2): 2161-2171 (2021) - 2020
- [j16]Xu Chi, Maureen A. Sartor, Sanghoon Lee, Meenakshi Anurag, Snehal Patil, Pelle Hall, Matthew Wexler, Xiao-Song Wang:
Universal concept signature analysis: genome-wide quantification of new biological and pathological functions of genes and pathways. Briefings Bioinform. 21(5): 1717-1732 (2020) - 2017
- [j15]Raymond G. Cavalcante, Maureen A. Sartor:
annotatr: genomic regions in context. Bioinform. 33(15): 2381-2383 (2017) - 2016
- [j14]Chee Lee, Snehal Patil, Maureen A. Sartor:
RNA-Enrich: a cut-off free functional enrichment testing method for RNA-seq with improved detection power. Bioinform. 32(7): 1100-1102 (2016) - [j13]Raymond G. Cavalcante, Snehal Patil, Terry E. Weymouth, Kestutis G. Bendinskas, Alla Karnovsky, Maureen A. Sartor:
ConceptMetab: exploring relationships among metabolite sets to identify links among biomedical concepts. Bioinform. 32(10): 1536-1543 (2016) - 2014
- [j12]Raymond G. Cavalcante, Chee Lee, Ryan P. Welch, Snehal Patil, Terry E. Weymouth, Laura J. Scott, Maureen A. Sartor:
Broad-Enrich: functional interpretation of large sets of broad genomic regions. Bioinform. 30(17): 393-400 (2014) - [j11]Yongseok Park, Maria E. Figueroa, Laura S. Rozek, Maureen A. Sartor:
MethylSig: a whole genome DNA methylation analysis pipeline. Bioinform. 30(17): 2414-2422 (2014) - [j10]Yan-Xiao Zhang, Yu-Hsuan Lin, Timothy D. Johnson, Laura S. Rozek, Maureen A. Sartor:
PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data. Bioinform. 30(18): 2568-2575 (2014) - 2012
- [j9]Alla Karnovsky, Terry E. Weymouth, Tim Hull, V. Glenn Tarcea, Giovanni Scardoni, Carlo Laudanna, Maureen A. Sartor, Kathleen A. Stringer, H. V. Jagadish, Charles F. Burant, Brian D. Athey, Gilbert S. Omenn:
Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data. Bioinform. 28(3): 373-380 (2012) - [j8]Maureen A. Sartor, Alexander S. Ade, Zach Wright, David J. States, Gilbert S. Omenn, Brian D. Athey, Alla Karnovsky:
Metab2MeSH: annotating compounds with medical subject headings. Bioinform. 28(10): 1408-1410 (2012) - [j7]Fernando Farfán, Jun Ma, Maureen A. Sartor, George Michailidis, H. V. Jagadish:
THINK Back: KNowledge-based Interpretation of High Throughput data. BMC Bioinform. 13(S-2): S4 (2012) - [j6]Richard C. McEachin, Keerthi S. Sannareddy, James D. Cavalcoli, Alla Karnovsky, Jacqueline M. Vink, Maureen A. Sartor:
Convergence of genetic influences in comorbidity. BMC Bioinform. 13(S-2): S8 (2012) - 2011
- [j5]Jun Ma, Maureen A. Sartor, H. V. Jagadish:
Appearance frequency modulated gene set enrichment testing. BMC Bioinform. 12: 81 (2011) - 2010
- [j4]Maureen A. Sartor, Vasudeva Mahavisno, Venkateshwar G. Keshamouni, James D. Cavalcoli, Zach Wright, Alla Karnovsky, Rork Kuick, H. V. Jagadish, Barbara Mirel, Terry E. Weymouth, Brian D. Athey, Gilbert S. Omenn:
ConceptGen: a gene set enrichment and gene set relation mapping tool. Bioinform. 26(4): 456-463 (2010) - [j3]Richard C. McEachin, Haiming Chen, Maureen A. Sartor, Scott F. Saccone, Benjamin J. Keller, Alan R. Prossin, James D. Cavalcoli, Melvin G. McInnis:
A genetic network model of cellular responses to lithium treatment and cocaine abuse in bipolar disorder. BMC Syst. Biol. 4: 158 (2010) - 2009
- [j2]Maureen A. Sartor, George D. Leikauf, Mario Medvedovic:
LRpath: a logistic regression approach for identifying enriched biological groups in gene expression data. Bioinform. 25(2): 211-217 (2009) - 2006
- [j1]Maureen A. Sartor, Craig R. Tomlinson, Scott C. Wesselkamper, Siva Sivaganesan, George D. Leikauf, Mario Medvedovic:
Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments. BMC Bioinform. 7: 538 (2006)
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