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Alla Karnovsky
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2020 – today
- 2020
- [j10]Maureen Kachman, Hani Habra
, William Duren, Janis E. Wigginton, Peter Sajjakulnukit
, George Michailidis, Charles F. Burant
, Alla Karnovsky
:
Deep annotation of untargeted LC-MS metabolomics data with Binner. Bioinform. 36(6): 1801-1806 (2020)
2010 – 2019
- 2019
- [j9]Jing Ma
, Alla Karnovsky, Farsad Afshinnia, Janis E. Wigginton, Daniel J. Rader, Loki Natarajan, Kumar Sharma, Anna C. Porter, Mahboob Rahman, Jiang He
, Lee Hamm, Tariq Shafi, Debbie S. Gipson, Crystal Gadegbeku, Harold Feldman, George Michailidis:
Differential network enrichment analysis reveals novel lipid pathways in chronic kidney disease. Bioinform. 35(18): 3441-3452 (2019) - 2017
- [j8]Sumanta Basu, William Duren, Charles R. Evans, Charles F. Burant
, George Michailidis, Alla Karnovsky:
Sparse network modeling and metscape-based visualization methods for the analysis of large-scale metabolomics data. Bioinform. 33(10): 1545-1553 (2017) - 2016
- [j7]Raymond G. Cavalcante
, Snehal Patil, Terry E. Weymouth, Kestutis G. Bendinskas
, Alla Karnovsky, Maureen A. Sartor:
ConceptMetab: exploring relationships among metabolite sets to identify links among biomedical concepts. Bioinform. 32(10): 1536-1543 (2016) - 2014
- [j6]William Duren, Terry E. Weymouth, Tim Hull, Gilbert S. Omenn
, Brian D. Athey
, Charles F. Burant
, Alla Karnovsky:
MetDisease - connecting metabolites to diseases via literature. Bioinform. 30(15): 2239-2241 (2014) - [c3]Frank J. Manion, Elizabeth Eisenhauer, Alla Karnovsky, Yongqun He, Yu Lin, Marcelline R. Harris:
Analysis of Content Coverage for Informed Consent Concepts. AMIA 2014 - [c2]Yu Lin, Marcelline R. Harris, Frank J. Manion, Elizabeth Eisenhauer, Bin Zhao, Wei Shi, Alla Karnovsky, Yongqun He:
Development of a BFO-Based Informed Consent Ontology (ICO). ICBO 2014: 84-86 - 2012
- [j5]Alla Karnovsky, Terry E. Weymouth, Tim Hull, V. Glenn Tarcea, Giovanni Scardoni, Carlo Laudanna, Maureen A. Sartor, Kathleen A. Stringer
, H. V. Jagadish, Charles F. Burant
, Brian D. Athey
, Gilbert S. Omenn
:
Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data. Bioinform. 28(3): 373-380 (2012) - [j4]Maureen A. Sartor, Alexander S. Ade, Zach Wright, David J. States, Gilbert S. Omenn
, Brian D. Athey
, Alla Karnovsky:
Metab2MeSH: annotating compounds with medical subject headings. Bioinform. 28(10): 1408-1410 (2012) - [j3]Richard C. McEachin, Keerthi S. Sannareddy
, James D. Cavalcoli, Alla Karnovsky, Jacqueline M. Vink, Maureen A. Sartor:
Convergence of genetic influences in comorbidity. BMC Bioinform. 13(S-2): S8 (2012) - [c1]Alla Karnovsky, Frank J. Manion, Terry E. Weymouth, V. Glenn Tarcea, Lisa Powell, Blake Roessler, Nicholas Steneck:
Development of an Informed Consent Ontology to Support Biobanking. AMIA 2012 - 2010
- [j2]Maureen A. Sartor, Vasudeva Mahavisno, Venkateshwar G. Keshamouni
, James D. Cavalcoli, Zach Wright, Alla Karnovsky, Rork Kuick, H. V. Jagadish, Barbara Mirel, Terry E. Weymouth, Brian D. Athey
, Gilbert S. Omenn
:
ConceptGen: a gene set enrichment and gene set relation mapping tool. Bioinform. 26(4): 456-463 (2010) - [j1]Jing Gao, V. Glenn Tarcea, Alla Karnovsky, Barbara R. Mirel, Terry E. Weymouth, Christopher W. Beecher, James D. Cavalcoli, Brian D. Athey
, Gilbert S. Omenn
, Charles F. Burant
, H. V. Jagadish:
Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks. Bioinform. 26(7): 971-973 (2010)
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