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ORCIDGabriel Moreno-Hagelsieb
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Journal Articles
- 2024
[j8]Xin Wei, Huagang Tan, Briallen Lobb, William Zhen, Zijing Wu, Donovan H. Parks, Josh D. Neufeld, Gabriel Moreno-Hagelsieb, Andrew C. Doxey:
AnnoView enables large-scale analysis, comparison, and visualization of microbial gene neighborhoods. Briefings Bioinform. 25(3) (2024)- 2021
- [j7]Milton H. Saier Jr.
, Vamsee S. Reddy, Gabriel Moreno-Hagelsieb, Kevin J. Hendargo, Yichi Zhang, Vasu Iddamsetty, Katie Jing Kay Lam, Nuo Tian, Steven Russum, Jianing Wang, Arturo Medrano-Soto:
The Transporter Classification Database (TCDB): 2021 update. Nucleic Acids Res. 49(Database-Issue): D461-D467 (2021) - 2016
- [j6]Milton H. Saier Jr., Vamsee S. Reddy, Brian V. Tsu, Muhammad Saad Ahmed, Chun Li, Gabriel Moreno-Hagelsieb:
The Transporter Classification Database (TCDB): recent advances. Nucleic Acids Res. 44(Database-Issue): 372-379 (2016) - 2015
- [j5]Ernesto Pérez-Rueda, Silvia Tenorio-Salgado, Alejandro Huerta-Saquero, Yalbi I. Balderas-Martínez, Gabriel Moreno-Hagelsieb:
The functional landscape bound to the transcription factors of Escherichia coli K-12. Comput. Biol. Chem. 58: 93-103 (2015) - 2013
- [j4]Gabriel Moreno-Hagelsieb, Zilin Wang, Stephanie Walsh, Aisha ElSherbiny:
Phylogenomic clustering for selecting non-redundant genomes for comparative genomics. Bioinform. 29(7): 947-949 (2013) - 2008
- [j3]Gabriel Moreno-Hagelsieb, Kristen Latimer:
Choosing BLAST options for better detection of orthologs as reciprocal best hits. Bioinform. 24(3): 319-324 (2008) - [j2]Cristian E. Martinez-Guerrero, Ricardo Ciria, Cei Abreu-Goodger, Gabriel Moreno-Hagelsieb, Enrique Merino:
GeConT 2: gene context analysis for orthologous proteins, conserved domains and metabolic pathways. Nucleic Acids Res. 36(Web-Server-Issue): 176-180 (2008) - 2002
- [j1]Gabriel Moreno-Hagelsieb, Julio Collado-Vides:
Operon conservation from the point of view of Escherichia coli, and inference of functional inter-dependence of gene products from genome context. Silico Biol. 2(2): 87-95 (2002)
Conference and Workshop Papers
- 2024
- [c5]Huagang Tan, Gabriel Moreno-Hagelsieb, Andrew C. Doxey:
Gene function prediction using an AnnoTree-based genomic language model. BIBM 2024: 5120-5126 - [c4]Gabriel Moreno-Hagelsieb:
Transcription Factors Across the Escherichia coli Pangenome: A 3D Perspective. RECOMB-CG 2024: 213-225 - 2005
- [c3]Xilin Wei, Roderick V. N. Melnik, Gabriel Moreno-Hagelsieb:
Modelling Dynamics of Genetic Networks as a Multiscale Process. International Conference on Computational Science (3) 2005: 134-138 - 2002
- [c2]Julio Collado-Vides, Gabriel Moreno-Hagelsieb, Ernesto Pérez-Rueda, Heladia Salgado, Araceli M. Huerta, Rosa María Gutiérrez, David A. Rosenblueth, Andrés Christen, Esperanza Benítez-Bellón, Arturo Medrano-Soto, Socorro Gama-Castro, Alberto Santos-Zavaleta, César Bonavides-Martínez, Edgar Díaz-Peredo, Fabiola Sánchez-Solano, Dulce María Millá:
Genomics of Gene Regulation: The View from Escherichia coli. Gene Regulations and Metabolism 2002: 103-128 - [c1]Gabriel Moreno-Hagelsieb, Julio Collado-Vides:
A powerful non-homology method for the prediction of operons in prokaryotes. ISMB 2002: 329-336
Coauthor Index
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