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21st RECOMB-CG 2024: Boston, MA, USA
- Céline Scornavacca, Maribel Hernández-Rosales
:
Comparative Genomics - 21st International Conference, RECOMB-CG 2024, Boston, MA, USA, April 27-28, 2024, Proceedings. Lecture Notes in Computer Science 14616, Springer 2024, ISBN 978-3-031-58071-0
Phylogenetic Networks
- Tandy J. Warnow
, Yasamin Tabatabaee
, Steven N. Evans
:
Statistically Consistent Estimation of Rooted and Unrooted Level-1 Phylogenetic Networks from SNP Data. 3-23 - Alitzel López Sánchez, Manuel Lafond:
Galled Perfect Transfer Networks. 24-43
Homology and Phylogenetic Reconstruction
- Wend Yam Donald Davy Ouedraogo, Aïda Ouangraoua:
Inferring Transcript Phylogenies from Transcript Ortholog Clusters. 47-68 - Yoav Dvir, Shelly Brezner, Sagi Snir:
Gene-Adjacency-Based Phylogenetics Under a Stochastic Gain-Loss Model. 69-85
Tools for Evolution Reconstruction
- José Antonio Ramírez-Rafael
, Annachiara Korchmaros
, Katia Aviña-Padilla
, Alitzel López Sánchez
, Andrea Arlette España-Tinajero
, Marc Hellmuth
, Peter F. Stadler
, Maribel Hernández-Rosales
:
REvolutionH-tl: Reconstruction of Evolutionary Histories tool. 89-109 - Prottoy Saha, Md Shamiul Islam, Tasnim Rahman, Adiba Shaira, Kazi Noshin, Rezwana Reaz, Md. Shamsuzzoha Bayzid
:
Gene Tree Parsimony in the Presence of Gene Duplication, Loss, and Incomplete Lineage Sorting. 110-128 - Samson Weiner, Yutian Feng, J. Peter Gogarten, Mukul S. Bansal
:
Assessing the Potential of Gene Tree Parsimony for Microbial Phylogenomics. 129-149
Genome Rearrangements
- Klairton Lima Brito
, Alexsandro Oliveira Alexandrino
, Gabriel Siqueira
, Andre Rodrigues Oliveira
, Ulisses Dias
, Zanoni Dias
:
Maximum Alternating Balanced Cycle Decomposition and Applications in Sorting by Intergenic Operations Problems. 153-172 - Sagi Snir, Yuri I. Wolf, Shelly Brezner, Eugene V. Koonin, Mike Steel:
On the Distribution of Synteny Blocks Under a Neutral Model of Genome Dynamics. 173-188 - Poly H. da Silva, Arash Jamshidpey, David Sankoff:
Sampling Gene Adjacencies and Geodesic Points of Random Genomes. 189-210
Genome Evolution
- Gabriel Moreno-Hagelsieb
:
Transcription Factors Across the Escherichia coli Pangenome: A 3D Perspective. 213-225 - Tal Gutman, Tamir Tuller
:
Revisiting the Effects of MDR1 Variants Using Computational Approaches. 226-247 - Alma Davidson, Marina Parr, Franziska Totzeck, Alexander Churkin, Danny Barash, Dmitrij Frishman, Tamir Tuller:
Evidence of Increased Adaptation of Omicron SARS-CoV-2 Codons to Humans. 248-270
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