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ORCIDMalgorzata Kotulska
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2020 – today
- 2023
[j13]Michal Burdukiewicz
, Dominik Rafacz, Agnieszka Barbach, Katarzyna Hubicka, Laura Bakala, Anna Lassota, Jakub Stecko, Natalia Szymanska, Jakub Wojciechowski, Dominika Kozakiewicz, Natalia Szulc, Jaroslaw Chilimoniuk, Izabela Jeskowiak, Marlena Gasior-Glogowska, Malgorzata Kotulska:
AmyloGraph: a comprehensive database of amyloid-amyloid interactions. Nucleic Acids Res. 51(D1): 352-357 (2023)- 2022
- [j12]Alicja W. Nowakowska, Malgorzata Kotulska:
Topological analysis as a tool for detection of abnormalities in protein-protein interaction data. Bioinform. 38(16): 3968-3975 (2022)
2010 – 2019
- 2018
- [j11]Pawel P. Wozniak, J. Pelc, M. Skrzypecki, Gert Vriend, Malgorzata Kotulska:
Bio-knowledge-based filters improve residue-residue contact prediction accuracy. Bioinform. 34(21): 3675-3683 (2018) - 2017
- [j10]Pawel P. Wozniak, Gert Vriend, Malgorzata Kotulska:
Correlated mutations select misfolded from properly folded proteins. Bioinform. 33(10): 1497-1504 (2017) - [j9]Pawel P. Wozniak, Bogumil Konopka, J. Xu, Gert Vriend, Malgorzata Kotulska:
Forecasting residue-residue contact prediction accuracy. Bioinform. 33(21): 3405-3414 (2017) - 2016
- [c4]Pawel P. Wozniak, Jean-Christophe Nebel, Malgorzata Kotulska:
Database of Peptides Susceptible to Aggregation as a Tool for Studying Mechanisms of Diseases of Civilization. ACIIDS (1) 2016: 310-319 - 2015
- [j8]Pawel P. Wozniak, Malgorzata Kotulska:
AmyLoad: website dedicated to amyloidogenic protein fragments. Bioinform. 31(20): 3395-3397 (2015) - [c3]Julita Kulbacka, Marek Kulbacki, Jakub Segen, Anna Choromanska, Jolanta Saczko, Magda Dubinska-Magiera, Malgorzata Kotulska:
Automated Analysis of Images from Confocal Laser Scanning Microscopy Applied to Observation of Calcium Channel Subunits in Nerve Cell Model Line Subjected Electroporation and Calcium. ACIIDS (2) 2015: 297-306 - 2014
- [j7]Pawel Gasior, Malgorzata Kotulska:
FISH Amyloid - a new method for finding amyloidogenic segments in proteins based on site specific co-occurence of aminoacids. BMC Bioinform. 15: 54 (2014) - [j6]Bogumil Konopka, Tomasz Golda, Malgorzata Kotulska:
Evaluating the Significance of Protein Functional Similarity Based on Gene Ontology. J. Comput. Biol. 21(11): 809-822 (2014) - 2013
- [j5]Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska:
Probabilistic grammatical model for helix-helix contact site classification. Algorithms Mol. Biol. 8: 31 (2013) - [j4]Jerzy Stanislawski, Malgorzata Kotulska, Olgierd Unold:
Machine learning methods can replace 3D profile method in classification of amyloidogenic hexapeptides. BMC Bioinform. 14: 21 (2013) - [j3]Malgorzata Kotulska, Olgierd Unold:
On the amyloid datasets used for training PAFIG - how (not) to extend the experimental dataset of hexapeptides. BMC Bioinform. 14: 351 (2013) - 2012
- [j2]Bogumil Konopka, Jean-Christophe Nebel, Malgorzata Kotulska:
Quality assessment of protein model-structures based on structural and functional similarities. BMC Bioinform. 13: 242 (2012) - 2010
- [c2]Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska:
Towards 3D Modeling of Interacting TM Helix Pairs Based on Classification of Helix Pair Sequence. PRIB 2010: 62-73
2000 – 2009
- 2009
- [c1]Bogumil Konopka, Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska:
Accuracy in Predicting Secondary Structure of Ionic Channels. ICCCI (SCI Volume) 2009: 315-326 - 2008
- [j1]Witold Dyrka, Andy T. Augousti, Malgorzata Kotulska:
Ion flux through membrane channels - An enhanced algorithm for the Poisson-Nernst-Planck model. J. Comput. Chem. 29(12): 1876-1888 (2008)
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