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ORCIDWitold Dyrka
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2020 – today
- 2022
[j8]Jakub Wojciechowski
, Emirhan Tekoglu, Marlena Gasior-Glogowska, Virginie Coustou, Natalia Szulc, Monika Szefczyk, Marta Kopaczynska, Sven J. Saupe, Witold Dyrka:
Exploring a diverse world of effector domains and amyloid signaling motifs in fungal NLR proteins. PLoS Comput. Biol. 18(12): 1010787 (2022)- 2021
- [j7]Witold Dyrka, Marlena Gasior-Glogowska, Monika Szefczyk, Natalia Szulc:
Searching for universal model of amyloid signaling motifs using probabilistic context-free grammars. BMC Bioinform. 22(1): 222 (2021) - 2020
- [c5]Olgierd Unold, Mateusz Gabor, Witold Dyrka:
Unsupervised Grammar Induction for Revealing the Internal Structure of Protein Sequence Motifs. AIME 2020: 299-309
2010 – 2019
- 2019
- [e1]Olgierd Unold, Witold Dyrka, Wojciech Wieczorek:
Proceedings of the 14th International Conference on Grammatical Inference, ICGI 2018, Wrocław, Poland, September 5-7, 2018. Proceedings of Machine Learning Research 93, PMLR 2019 [contents] - 2018
- [j6]Mathieu Hatt, Baptiste Laurent, Anouar Ouahabi, Hadi Fayad, Shan Tan, Laquan Li, Wei Lu, Vincent Jaouen, Clovis Tauber, Jakub Czakon, Filip Drapejkowski, Witold Dyrka, Sorina Camarasu-Pop, Frédéric Cervenansky, Pascal Girard, Tristan Glatard, Michaël Kain, Yao Yao, Christian Barillot, Assen Kirov, Dimitris Visvikis:
The first MICCAI challenge on PET tumor segmentation. Medical Image Anal. 44: 177-195 (2018) - [c4]Olgierd Unold, Witold Dyrka, Wojciech Wieczorek:
International Conference on Grammatical Inference 2018: Preface. ICGI 2018: 1-2 - [c3]Mateusz Pyzik, François Coste, Witold Dyrka:
How to measure the topological quality of protein parse trees? ICGI 2018: 118-138 - [i3]Witold Dyrka, François Coste, Juliette Talibart:
Estimating probabilistic context-free grammars for proteins using contact map constraints. CoRR abs/1805.08630 (2018) - 2017
- [j5]Bogumil Konopka, Marta Marciniak, Witold Dyrka:
Quantiprot - a Python package for quantitative analysis of protein sequences. BMC Bioinform. 18(1): 339 (2017) - 2016
- [i2]Jakub Czakon, Filip Drapejkowski, Grzegorz Zurek, Piotr Giedziun, Jacek Zebrowski, Witold Dyrka:
Machine learning methods for accurate delineation of tumors in PET images. CoRR abs/1610.09493 (2016) - [i1]Witold Dyrka, François Coste, Olgierd Unold, Lukasz Culer, Agnieszka Kaczmarek:
How to measure the topological quality of protein grammars? CoRR abs/1611.10078 (2016) - 2013
- [j4]Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska:
Probabilistic grammatical model for helix-helix contact site classification. Algorithms Mol. Biol. 8: 31 (2013) - 2010
- [c2]Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska:
Towards 3D Modeling of Interacting TM Helix Pairs Based on Classification of Helix Pair Sequence. PRIB 2010: 62-73
2000 – 2009
- 2009
- [j3]Witold Dyrka, Jean-Christophe Nebel:
A stochastic context free grammar based framework for analysis of protein sequences. BMC Bioinform. 10: 323 (2009) - [c1]Bogumil Konopka, Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska:
Accuracy in Predicting Secondary Structure of Ionic Channels. ICCCI (SCI Volume) 2009: 315-326 - 2008
- [j2]Witold Dyrka, Andy T. Augousti, Malgorzata Kotulska:
Ion flux through membrane channels - An enhanced algorithm for the Poisson-Nernst-Planck model. J. Comput. Chem. 29(12): 1876-1888 (2008) - 2007
- [j1]Witold Dyrka, Jean-Christophe Nebel:
A probabilistic context-free grammar for the detection of binding sites from a protein sequence. BMC Syst. Biol. 1(S-1): P78 (2007)
Coauthor Index
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